RNA–Protein interactions for RNA: ENST00000443345.2

PDCD2-203, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 1,897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-203ENST00000443345 LRRC7Q96NW7 1537 aa28.45■■■□□ 2.15
PDCD2-203ENST00000443345 ESCO1Q5FWF5 840 aa28.44■■■□□ 2.14
PDCD2-203ENST00000443345 SSH2Q76I76 1423 aa28.44■■■□□ 2.14
PDCD2-203ENST00000443345 DCCP43146 1447 aa28.44■■■□□ 2.14
PDCD2-203ENST00000443345 ATF3P18847 181 aa28.43■■■□□ 2.14
PDCD2-203ENST00000443345 ZRANB1Q9UGI0 708 aa28.41■■■□□ 2.14
PDCD2-203ENST00000443345 ORAI2Q96SN7 254 aa28.4■■■□□ 2.14
PDCD2-203ENST00000443345 MSH6P52701 1360 aa28.4■■■□□ 2.14
PDCD2-203ENST00000443345 C1orf167Q5SNV9 1468 aa28.4■■■□□ 2.14
PDCD2-203ENST00000443345 CENPBP07199 599 aaPredicted RBP28.38■■■□□ 2.13
PDCD2-203ENST00000443345 MTHFSP49914 203 aa28.38■■■□□ 2.13
PDCD2-203ENST00000443345 TTC21AQ8NDW8 1320 aa28.38■■■□□ 2.13
PDCD2-203ENST00000443345 MST1RQ04912 1400 aa28.38■■■□□ 2.13
PDCD2-203ENST00000443345 CADPS2Q86UW7 1296 aa28.38■■■□□ 2.13
PDCD2-203ENST00000443345 COG3Q96JB2 828 aa28.37■■■□□ 2.13
PDCD2-203ENST00000443345 HNRNPUQ00839 825 aaKnown RBP eCLIP28.36■■■□□ 2.13
PDCD2-203ENST00000443345 SCAF1Q9H7N4 1312 aaKnown RBP28.34■■■□□ 2.13
PDCD2-203ENST00000443345 PSME1Q06323 249 aa28.32■■■□□ 2.12
PDCD2-203ENST00000443345 OVOS2A0A0J9YW53 1432 aa28.31■■■□□ 2.12
PDCD2-203ENST00000443345 OVOS2Q6IE36 1432 aa28.31■■■□□ 2.12
PDCD2-203ENST00000443345 FBLN1P23142 703 aa28.31■■■□□ 2.12
PDCD2-203ENST00000443345 KIF1AQ12756 1690 aa28.3■■■□□ 2.12
PDCD2-203ENST00000443345 FOXO3O43524 673 aa28.3■■■□□ 2.12
PDCD2-203ENST00000443345 WDR43Q15061 677 aaKnown RBP eCLIP28.29■■■□□ 2.12
PDCD2-203ENST00000443345 PIK3C2AO00443 1686 aa28.29■■■□□ 2.12
PDCD2-203ENST00000443345 PAK3O75914 559 aaPredicted RBP28.28■■■□□ 2.12
PDCD2-203ENST00000443345 CFAP53Q96M91 514 aa28.28■■■□□ 2.12
PDCD2-203ENST00000443345 ADAMTS8Q9UP79 889 aa28.28■■■□□ 2.12
PDCD2-203ENST00000443345 AATKQ6ZMQ8 1374 aa28.27■■■□□ 2.12
PDCD2-203ENST00000443345 MAP2P11137 1827 aaKnown RBP28.27■■■□□ 2.12
PDCD2-203ENST00000443345 POLKQ9UBT6 870 aa28.27■■■□□ 2.12
PDCD2-203ENST00000443345 USP31Q70CQ4 1352 aa28.27■■■□□ 2.12
PDCD2-203ENST00000443345 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
PDCD2-203ENST00000443345 INSRP06213 1382 aa28.24■■■□□ 2.11
PDCD2-203ENST00000443345 SHPRHQ149N8 1683 aa28.24■■■□□ 2.11
PDCD2-203ENST00000443345 NLRP6P59044 892 aa28.23■■■□□ 2.11
PDCD2-203ENST00000443345 XPCQ01831 940 aaPredicted RBP28.23■■■□□ 2.11
PDCD2-203ENST00000443345 NUTM2GQ5VZR2 741 aa28.21■■■□□ 2.11
PDCD2-203ENST00000443345 KRT28Q7Z3Y7 464 aa28.21■■■□□ 2.11
PDCD2-203ENST00000443345 EMILIN1Q9Y6C2 1016 aa28.21■■■□□ 2.11
PDCD2-203ENST00000443345 PNPLA6Q8IY17 1366 aa28.21■■■□□ 2.11
PDCD2-203ENST00000443345 SLAIN2Q9P270 581 aa28.21■■■□□ 2.11
PDCD2-203ENST00000443345 BLMP54132 1417 aaPredicted RBP28.2■■■□□ 2.1
PDCD2-203ENST00000443345 PPM1GO15355 546 aaPredicted RBP28.2■■■□□ 2.1
PDCD2-203ENST00000443345 RRS1Q15050 365 aaKnown RBP28.2■■■□□ 2.1
PDCD2-203ENST00000443345 USP54Q70EL1 1684 aa28.2■■■□□ 2.1
PDCD2-203ENST00000443345 LTBP4Q8N2S1 1624 aa28.2■■■□□ 2.1
PDCD2-203ENST00000443345 COL3A1P02461 1466 aaPredicted RBP28.2■■■□□ 2.1
PDCD2-203ENST00000443345 MARF1Q9Y4F3 1742 aaKnown RBP28.2■■■□□ 2.1
PDCD2-203ENST00000443345 SMG6Q86US8 1419 aaKnown RBP28.19■■■□□ 2.1
PDCD2-203ENST00000443345 TRPM3Q9HCF6 1732 aaPredicted RBP28.18■■■□□ 2.1
PDCD2-203ENST00000443345 AEBP2Q6ZN18 517 aaPredicted RBP28.18■■■□□ 2.1
PDCD2-203ENST00000443345 ZBED9Q6R2W3 1325 aa28.16■■■□□ 2.1
PDCD2-203ENST00000443345 SENP3-EIF4A1A0A087X0R7 540 aa28.16■■■□□ 2.1
PDCD2-203ENST00000443345 SOX12O15370 315 aa28.16■■■□□ 2.1
PDCD2-203ENST00000443345 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
PDCD2-203ENST00000443345 DDX17Q92841 729 aaKnown RBP28.16■■■□□ 2.1
PDCD2-203ENST00000443345 CDK12Q9NYV4 1490 aaPredicted RBP28.14■■■□□ 2.1
PDCD2-203ENST00000443345 NPHP3Q7Z494 1330 aa28.14■■■□□ 2.1
PDCD2-203ENST00000443345 DIAPH1O60610 1272 aaKnown RBP28.13■■■□□ 2.09
PDCD2-203ENST00000443345 NUDCQ9Y266 331 aa28.12■■■□□ 2.09
PDCD2-203ENST00000443345 LMOD2Q6P5Q4 547 aa28.09■■■□□ 2.09
PDCD2-203ENST00000443345 CCDC146Q8IYE0 955 aa28.09■■■□□ 2.09
PDCD2-203ENST00000443345 PXDNQ92626 1479 aa28.08■■■□□ 2.09
PDCD2-203ENST00000443345 MAP3K19Q56UN5 1328 aa28.08■■■□□ 2.09
PDCD2-203ENST00000443345 U2AF1L5P0DN76 240 aaPredicted RBP28.08■■■□□ 2.09
PDCD2-203ENST00000443345 U2AF1Q01081 240 aaKnown RBP eCLIP28.08■■■□□ 2.09
PDCD2-203ENST00000443345 U2SURPO15042 1029 aaKnown RBP28.08■■■□□ 2.09
PDCD2-203ENST00000443345 PEAK1Q9H792 1746 aa28.08■■■□□ 2.09
PDCD2-203ENST00000443345 ALS2Q96Q42 1657 aa28.08■■■□□ 2.08
PDCD2-203ENST00000443345 SBNO1A3KN83 1393 aa28.07■■■□□ 2.08
PDCD2-203ENST00000443345 IL13P35225 146 aa28.04■■■□□ 2.08
PDCD2-203ENST00000443345 SALL2Q9Y467 1007 aaPredicted RBP28.04■■■□□ 2.08
PDCD2-203ENST00000443345 KCNH5Q8NCM2 988 aa28.03■■■□□ 2.08
PDCD2-203ENST00000443345 HSP90AB2PQ58FF8 381 aa28.02■■■□□ 2.08
PDCD2-203ENST00000443345 NFAT5O94916 1531 aa28.02■■■□□ 2.08
PDCD2-203ENST00000443345 AMPHP49418 695 aa28.02■■■□□ 2.08
PDCD2-203ENST00000443345 USP19O94966 1318 aa28.01■■■□□ 2.07
PDCD2-203ENST00000443345 TNS3Q68CZ2 1445 aa28.01■■■□□ 2.07
PDCD2-203ENST00000443345 SLIT3O75094 1523 aa28.01■■■□□ 2.07
PDCD2-203ENST00000443345 RUNDC1Q96C34 613 aa28.01■■■□□ 2.07
PDCD2-203ENST00000443345 FLT4P35916 1363 aa28.01■■■□□ 2.07
PDCD2-203ENST00000443345 APAF1O14727 1248 aa28■■■□□ 2.07
PDCD2-203ENST00000443345 SPATA31A3Q5VYP0 1347 aa28■■■□□ 2.07
PDCD2-203ENST00000443345 GCP02774 474 aa28■■■□□ 2.07
PDCD2-203ENST00000443345 SOS2Q07890 1332 aaPredicted RBP27.99■■■□□ 2.07
PDCD2-203ENST00000443345 KIF24Q5T7B8 1368 aa27.99■■■□□ 2.07
PDCD2-203ENST00000443345 PLEKHG5O94827 1062 aa27.99■■■□□ 2.07
PDCD2-203ENST00000443345 EIF4A2Q14240 407 aaKnown RBP27.98■■■□□ 2.07
PDCD2-203ENST00000443345 LTN1O94822 1766 aa27.97■■■□□ 2.07
PDCD2-203ENST00000443345 NHSL1Q5SYE7 1610 aa27.96■■■□□ 2.07
PDCD2-203ENST00000443345 MED1Q15648 1581 aaPredicted RBP27.96■■■□□ 2.07
PDCD2-203ENST00000443345 HOXC9P31274 260 aa27.95■■■□□ 2.07
PDCD2-203ENST00000443345 FCHSD2O94868 740 aa27.95■■■□□ 2.06
PDCD2-203ENST00000443345 PLEKHF1Q96S99 279 aa27.95■■■□□ 2.06
PDCD2-203ENST00000443345 ARHGEF10O15013 1369 aa27.95■■■□□ 2.06
PDCD2-203ENST00000443345 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
PDCD2-203ENST00000443345 RTL1A6NKG5 1358 aa27.93■■■□□ 2.06
PDCD2-203ENST00000443345 ROBO1Q9Y6N7 1651 aa27.92■■■□□ 2.06
PDCD2-203ENST00000443345 IQSEC2Q5JU85 1478 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms