RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-208ENST00000443203 KIF1AQ12756 1690 aa19.59■□□□□ 0.73
NELFA-208ENST00000443203 HAP1P54257 671 aaPredicted RBP19.59■□□□□ 0.73
NELFA-208ENST00000443203 POLR3GLQ9BT43 218 aa19.59■□□□□ 0.73
NELFA-208ENST00000443203 TULP4Q9NRJ4 1543 aa19.59■□□□□ 0.73
NELFA-208ENST00000443203 PHF8Q9UPP1 1060 aa19.58■□□□□ 0.72
NELFA-208ENST00000443203 FMN2Q9NZ56 1722 aa19.58■□□□□ 0.72
NELFA-208ENST00000443203 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
NELFA-208ENST00000443203 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
NELFA-208ENST00000443203 SLIT2O94813 1529 aa19.55■□□□□ 0.72
NELFA-208ENST00000443203 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
NELFA-208ENST00000443203 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
NELFA-208ENST00000443203 ATP7BP35670 1465 aa19.54■□□□□ 0.72
NELFA-208ENST00000443203 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.54■□□□□ 0.72
NELFA-208ENST00000443203 TNS3Q68CZ2 1445 aa19.53■□□□□ 0.72
NELFA-208ENST00000443203 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
NELFA-208ENST00000443203 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
NELFA-208ENST00000443203 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
NELFA-208ENST00000443203 C11orf95C9JLR9 678 aaPredicted RBP19.52■□□□□ 0.72
NELFA-208ENST00000443203 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
NELFA-208ENST00000443203 SBNO1A3KN83 1393 aa19.52■□□□□ 0.72
NELFA-208ENST00000443203 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
NELFA-208ENST00000443203 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
NELFA-208ENST00000443203 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
NELFA-208ENST00000443203 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
NELFA-208ENST00000443203 CABLES1Q8TDN4 633 aa19.5■□□□□ 0.71
NELFA-208ENST00000443203 GLI3P10071 1580 aa19.49■□□□□ 0.71
NELFA-208ENST00000443203 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
NELFA-208ENST00000443203 VPS72Q15906 364 aa19.49■□□□□ 0.71
NELFA-208ENST00000443203 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
NELFA-208ENST00000443203 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
NELFA-208ENST00000443203 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
NELFA-208ENST00000443203 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
NELFA-208ENST00000443203 CCDC9Q9Y3X0 531 aaKnown RBP19.49■□□□□ 0.71
NELFA-208ENST00000443203 ACEP12821 1306 aa19.49■□□□□ 0.71
NELFA-208ENST00000443203 RGPD8O14715 1765 aaPredicted RBP19.48■□□□□ 0.71
NELFA-208ENST00000443203 ZNF316A6NFI3 1004 aaPredicted RBP19.48■□□□□ 0.71
NELFA-208ENST00000443203 SF3B2Q13435 895 aaKnown RBP19.48■□□□□ 0.71
NELFA-208ENST00000443203 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
NELFA-208ENST00000443203 BLMP54132 1417 aaPredicted RBP19.48■□□□□ 0.71
NELFA-208ENST00000443203 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
NELFA-208ENST00000443203 BRWD3Q6RI45 1802 aa19.47■□□□□ 0.71
NELFA-208ENST00000443203 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
NELFA-208ENST00000443203 WASHC2AQ641Q2 1341 aa19.47■□□□□ 0.71
NELFA-208ENST00000443203 ONECUT3O60422 494 aaPredicted RBP19.45■□□□□ 0.7
NELFA-208ENST00000443203 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
NELFA-208ENST00000443203 DEFB132Q7Z7B7 95 aa19.44■□□□□ 0.7
NELFA-208ENST00000443203 FAM83GA6ND36 823 aa19.43■□□□□ 0.7
NELFA-208ENST00000443203 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
NELFA-208ENST00000443203 KRT27Q7Z3Y8 459 aa19.42■□□□□ 0.7
NELFA-208ENST00000443203 TOPAZ1Q8N9V7 1692 aa19.42■□□□□ 0.7
NELFA-208ENST00000443203 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
NELFA-208ENST00000443203 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
NELFA-208ENST00000443203 A0A0G2JS52 829 aa19.4■□□□□ 0.7
NELFA-208ENST00000443203 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
NELFA-208ENST00000443203 MYT1Q01538 1121 aa19.4■□□□□ 0.7
NELFA-208ENST00000443203 PANK3Q9H999 370 aa19.4■□□□□ 0.7
NELFA-208ENST00000443203 BRD4O60885 1362 aaPredicted RBP19.4■□□□□ 0.7
NELFA-208ENST00000443203 PLCH1Q4KWH8 1693 aa19.4■□□□□ 0.7
NELFA-208ENST00000443203 CPSF1Q10570 1443 aaKnown RBP19.39■□□□□ 0.69
NELFA-208ENST00000443203 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
NELFA-208ENST00000443203 BTG4Q9NY30 223 aa19.38■□□□□ 0.69
NELFA-208ENST00000443203 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
NELFA-208ENST00000443203 USP6P35125 1406 aa19.37■□□□□ 0.69
NELFA-208ENST00000443203 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
NELFA-208ENST00000443203 TTC21BQ7Z4L5 1316 aa19.35■□□□□ 0.69
NELFA-208ENST00000443203 FAM98CQ17RN3 349 aaKnown RBP19.35■□□□□ 0.69
NELFA-208ENST00000443203 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
NELFA-208ENST00000443203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.34■□□□□ 0.692e-6■■■□□ 15.3
NELFA-208ENST00000443203 KNSTRNQ9Y448 316 aa19.34■□□□□ 0.69
NELFA-208ENST00000443203 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
NELFA-208ENST00000443203 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
NELFA-208ENST00000443203 BAG6P46379 1132 aa19.33■□□□□ 0.68
NELFA-208ENST00000443203 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.68
NELFA-208ENST00000443203 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
NELFA-208ENST00000443203 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
NELFA-208ENST00000443203 COL14A1Q05707 1796 aaKnown RBP19.32■□□□□ 0.68
NELFA-208ENST00000443203 MYOM1P52179 1685 aa19.31■□□□□ 0.68
NELFA-208ENST00000443203 ALS2Q96Q42 1657 aa19.31■□□□□ 0.68
NELFA-208ENST00000443203 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
NELFA-208ENST00000443203 LRP5O75197 1615 aa19.3■□□□□ 0.68
NELFA-208ENST00000443203 AKAP12Q02952 1782 aa19.3■□□□□ 0.68
NELFA-208ENST00000443203 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
NELFA-208ENST00000443203 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
NELFA-208ENST00000443203 NRAPQ86VF7 1730 aa19.3■□□□□ 0.68
NELFA-208ENST00000443203 CGNL1Q0VF96 1302 aa19.29■□□□□ 0.68
NELFA-208ENST00000443203 SPATA31A5Q5VU36 1347 aa19.29■□□□□ 0.68
NELFA-208ENST00000443203 SPATA31A7Q8IWB4 1347 aa19.29■□□□□ 0.68
NELFA-208ENST00000443203 NLRP13Q86W25 1043 aa19.29■□□□□ 0.68
NELFA-208ENST00000443203 NLRP6P59044 892 aa19.28■□□□□ 0.68
NELFA-208ENST00000443203 PSDA5PKW4 1024 aaPredicted RBP19.27■□□□□ 0.68
NELFA-208ENST00000443203 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.68
NELFA-208ENST00000443203 NME9Q86XW9 330 aa19.27■□□□□ 0.68
NELFA-208ENST00000443203 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
NELFA-208ENST00000443203 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
NELFA-208ENST00000443203 COG3Q96JB2 828 aa19.26■□□□□ 0.67
NELFA-208ENST00000443203 FYB1O15117 783 aa19.25■□□□□ 0.67
NELFA-208ENST00000443203 USP31Q70CQ4 1352 aa19.23■□□□□ 0.67
NELFA-208ENST00000443203 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
NELFA-208ENST00000443203 EN1Q05925 392 aaPredicted RBP19.23■□□□□ 0.67
NELFA-208ENST00000443203 FAM182BQ5T319 152 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms