RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-208ENST00000443203 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
NELFA-208ENST00000443203 ABCC9O60706 1549 aa30.04■■■□□ 2.4
NELFA-208ENST00000443203 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
NELFA-208ENST00000443203 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
NELFA-208ENST00000443203 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
NELFA-208ENST00000443203 NACADO15069 1562 aa28.27■■■□□ 2.12
NELFA-208ENST00000443203 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
NELFA-208ENST00000443203 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
NELFA-208ENST00000443203 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
NELFA-208ENST00000443203 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
NELFA-208ENST00000443203 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
NELFA-208ENST00000443203 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
NELFA-208ENST00000443203 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
NELFA-208ENST00000443203 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
NELFA-208ENST00000443203 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
NELFA-208ENST00000443203 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
NELFA-208ENST00000443203 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
NELFA-208ENST00000443203 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
NELFA-208ENST00000443203 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
NELFA-208ENST00000443203 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
NELFA-208ENST00000443203 CUX2O14529 1486 aa26.01■■□□□ 1.75
NELFA-208ENST00000443203 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
NELFA-208ENST00000443203 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
NELFA-208ENST00000443203 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
NELFA-208ENST00000443203 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
NELFA-208ENST00000443203 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
NELFA-208ENST00000443203 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
NELFA-208ENST00000443203 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
NELFA-208ENST00000443203 NESP48681 1621 aa25.73■■□□□ 1.71
NELFA-208ENST00000443203 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
NELFA-208ENST00000443203 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
NELFA-208ENST00000443203 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
NELFA-208ENST00000443203 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
NELFA-208ENST00000443203 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
NELFA-208ENST00000443203 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
NELFA-208ENST00000443203 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
NELFA-208ENST00000443203 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
NELFA-208ENST00000443203 WIZO95785 1651 aa25.31■■□□□ 1.64
NELFA-208ENST00000443203 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
NELFA-208ENST00000443203 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
NELFA-208ENST00000443203 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
NELFA-208ENST00000443203 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
NELFA-208ENST00000443203 WDR62O43379 1518 aa25.09■■□□□ 1.61
NELFA-208ENST00000443203 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
NELFA-208ENST00000443203 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
NELFA-208ENST00000443203 CFTRP13569 1480 aa24.98■■□□□ 1.59
NELFA-208ENST00000443203 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
NELFA-208ENST00000443203 OSCARQ8IYS5 282 aa24.81■■□□□ 1.56
NELFA-208ENST00000443203 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
NELFA-208ENST00000443203 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
NELFA-208ENST00000443203 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
NELFA-208ENST00000443203 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
NELFA-208ENST00000443203 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
NELFA-208ENST00000443203 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
NELFA-208ENST00000443203 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
NELFA-208ENST00000443203 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
NELFA-208ENST00000443203 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.485e-7■■■■□ 22.5
NELFA-208ENST00000443203 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
NELFA-208ENST00000443203 CYB5RLQ6IPT4 315 aa24.26■■□□□ 1.47
NELFA-208ENST00000443203 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
NELFA-208ENST00000443203 CHD1O14646 1710 aa24.22■■□□□ 1.47
NELFA-208ENST00000443203 FBLN2P98095 1184 aa24.22■■□□□ 1.47
NELFA-208ENST00000443203 SOGA1O94964 1423 aa24.18■■□□□ 1.46
NELFA-208ENST00000443203 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
NELFA-208ENST00000443203 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
NELFA-208ENST00000443203 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
NELFA-208ENST00000443203 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
NELFA-208ENST00000443203 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
NELFA-208ENST00000443203 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
NELFA-208ENST00000443203 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
NELFA-208ENST00000443203 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
NELFA-208ENST00000443203 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
NELFA-208ENST00000443203 CUX1P39880 1505 aa24.01■■□□□ 1.43
NELFA-208ENST00000443203 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
NELFA-208ENST00000443203 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
NELFA-208ENST00000443203 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
NELFA-208ENST00000443203 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
NELFA-208ENST00000443203 SYNJ2O15056 1496 aa23.9■■□□□ 1.42
NELFA-208ENST00000443203 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
NELFA-208ENST00000443203 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
NELFA-208ENST00000443203 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
NELFA-208ENST00000443203 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
NELFA-208ENST00000443203 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
NELFA-208ENST00000443203 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
NELFA-208ENST00000443203 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
NELFA-208ENST00000443203 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
NELFA-208ENST00000443203 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
NELFA-208ENST00000443203 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
NELFA-208ENST00000443203 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
NELFA-208ENST00000443203 NUP160Q12769 1436 aa23.57■■□□□ 1.36
NELFA-208ENST00000443203 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
NELFA-208ENST00000443203 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
NELFA-208ENST00000443203 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
NELFA-208ENST00000443203 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
NELFA-208ENST00000443203 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
NELFA-208ENST00000443203 JPH4Q96JJ6 628 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms