RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
USP6NL-203ENST00000443016 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
USP6NL-203ENST00000443016 GJD4Q96KN9 370 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-203ENST00000443016 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
USP6NL-203ENST00000443016 ATRNO75882 1429 aa12.5□□□□□ -0.41
USP6NL-203ENST00000443016 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
USP6NL-203ENST00000443016 ATP7BP35670 1465 aa12.5□□□□□ -0.41
USP6NL-203ENST00000443016 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
USP6NL-203ENST00000443016 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
USP6NL-203ENST00000443016 ACEP12821 1306 aa12.49□□□□□ -0.41
USP6NL-203ENST00000443016 MARF1Q9Y4F3 1742 aaKnown RBP12.49□□□□□ -0.41
USP6NL-203ENST00000443016 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
USP6NL-203ENST00000443016 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
USP6NL-203ENST00000443016 SLIT2O94813 1529 aa12.48□□□□□ -0.41
USP6NL-203ENST00000443016 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
USP6NL-203ENST00000443016 FAM83GA6ND36 823 aa12.47□□□□□ -0.41
USP6NL-203ENST00000443016 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
USP6NL-203ENST00000443016 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
USP6NL-203ENST00000443016 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
USP6NL-203ENST00000443016 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
USP6NL-203ENST00000443016 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
USP6NL-203ENST00000443016 A0A0G2JS52 829 aa12.46□□□□□ -0.41
USP6NL-203ENST00000443016 MYT1Q01538 1121 aa12.46□□□□□ -0.41
USP6NL-203ENST00000443016 PRDM11Q9NQV5 511 aa12.46□□□□□ -0.41
USP6NL-203ENST00000443016 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.42
USP6NL-203ENST00000443016 FKBP8Q14318 412 aa12.46□□□□□ -0.42
USP6NL-203ENST00000443016 ABTB2Q8N961 1025 aa12.46□□□□□ -0.42
USP6NL-203ENST00000443016 VPS72Q15906 364 aa12.45□□□□□ -0.42
USP6NL-203ENST00000443016 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
USP6NL-203ENST00000443016 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
USP6NL-203ENST00000443016 POLR3AO14802 1390 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-203ENST00000443016 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
USP6NL-203ENST00000443016 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
USP6NL-203ENST00000443016 TRPM3Q9HCF6 1732 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-203ENST00000443016 CARD11Q9BXL7 1154 aa12.44□□□□□ -0.42
USP6NL-203ENST00000443016 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
USP6NL-203ENST00000443016 ZC3H6P61129 1189 aaKnown RBP12.43□□□□□ -0.42
USP6NL-203ENST00000443016 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
USP6NL-203ENST00000443016 ALS2Q96Q42 1657 aa12.43□□□□□ -0.42
USP6NL-203ENST00000443016 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
USP6NL-203ENST00000443016 TRPM1Q7Z4N2 1603 aa12.42□□□□□ -0.42
USP6NL-203ENST00000443016 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
USP6NL-203ENST00000443016 QRICH2Q9H0J4 1663 aa12.42□□□□□ -0.42
USP6NL-203ENST00000443016 ABCA3Q99758 1704 aa12.42□□□□□ -0.42
USP6NL-203ENST00000443016 CHRNA2Q15822 529 aa12.42□□□□□ -0.42
USP6NL-203ENST00000443016 KIAA0232Q92628 1395 aa12.42□□□□□ -0.42
USP6NL-203ENST00000443016 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
USP6NL-203ENST00000443016 PLCH1Q4KWH8 1693 aa12.41□□□□□ -0.42
USP6NL-203ENST00000443016 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
USP6NL-203ENST00000443016 GLI3P10071 1580 aa12.4□□□□□ -0.42
USP6NL-203ENST00000443016 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
USP6NL-203ENST00000443016 TOPAZ1Q8N9V7 1692 aa12.4□□□□□ -0.42
USP6NL-203ENST00000443016 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
USP6NL-203ENST00000443016 EVA1CP58658 441 aa12.39□□□□□ -0.43
USP6NL-203ENST00000443016 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
USP6NL-203ENST00000443016 NLRP6P59044 892 aa12.38□□□□□ -0.43
USP6NL-203ENST00000443016 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
USP6NL-203ENST00000443016 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
USP6NL-203ENST00000443016 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
USP6NL-203ENST00000443016 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
USP6NL-203ENST00000443016 CCER1Q8TC90 406 aaPredicted RBP12.38□□□□□ -0.43
USP6NL-203ENST00000443016 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
USP6NL-203ENST00000443016 USP35Q9P2H5 1018 aa12.37□□□□□ -0.43
USP6NL-203ENST00000443016 GCP02774 474 aa12.37□□□□□ -0.43
USP6NL-203ENST00000443016 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-203ENST00000443016 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-203ENST00000443016 USP6P35125 1406 aa12.37□□□□□ -0.43
USP6NL-203ENST00000443016 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
USP6NL-203ENST00000443016 SPATA31A5Q5VU36 1347 aa12.36□□□□□ -0.43
USP6NL-203ENST00000443016 SPATA31A7Q8IWB4 1347 aa12.36□□□□□ -0.43
USP6NL-203ENST00000443016 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
USP6NL-203ENST00000443016 USP19O94966 1318 aa12.35□□□□□ -0.43
USP6NL-203ENST00000443016 CLSPNQ9HAW4 1339 aa12.34□□□□□ -0.43
USP6NL-203ENST00000443016 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
USP6NL-203ENST00000443016 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
USP6NL-203ENST00000443016 SPATA31A1Q5TZJ5 1347 aa12.33□□□□□ -0.44
USP6NL-203ENST00000443016 NRAPQ86VF7 1730 aa12.33□□□□□ -0.44
USP6NL-203ENST00000443016 SOX12O15370 315 aa12.33□□□□□ -0.44
USP6NL-203ENST00000443016 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-203ENST00000443016 CPDO75976 1380 aa12.33□□□□□ -0.44
USP6NL-203ENST00000443016 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
USP6NL-203ENST00000443016 SBNO2Q9Y2G9 1366 aa12.33□□□□□ -0.44
USP6NL-203ENST00000443016 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
USP6NL-203ENST00000443016 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
USP6NL-203ENST00000443016 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
USP6NL-203ENST00000443016 LARP1Q6PKG0 1096 aaKnown RBP12.32□□□□□ -0.44
USP6NL-203ENST00000443016 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
USP6NL-203ENST00000443016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP6NL-203ENST00000443016 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
USP6NL-203ENST00000443016 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
USP6NL-203ENST00000443016 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-203ENST00000443016 DEFB132Q7Z7B7 95 aa12.31□□□□□ -0.44
USP6NL-203ENST00000443016 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
USP6NL-203ENST00000443016 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
USP6NL-203ENST00000443016 ST20-MTHFSA0A0A6YYL1 179 aa12.3□□□□□ -0.44
USP6NL-203ENST00000443016 PDE3BQ13370 1112 aa12.3□□□□□ -0.44
USP6NL-203ENST00000443016 TCP11L2Q8N4U5 519 aa12.3□□□□□ -0.44
USP6NL-203ENST00000443016 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
USP6NL-203ENST00000443016 SLC12A5Q9H2X9 1139 aa12.29□□□□□ -0.44
USP6NL-203ENST00000443016 TERF2IPQ9NYB0 399 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms