RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TMEM131LA2VDJ0 1609 aa12.41□□□□□ -0.42
HDAC6-209ENST00000440653 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
HDAC6-209ENST00000440653 ADGRB1O14514 1584 aa12.41□□□□□ -0.42
HDAC6-209ENST00000440653 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC6-209ENST00000440653 TESK2Q96S53 571 aa12.41□□□□□ -0.42
HDAC6-209ENST00000440653 NALCNQ8IZF0 1738 aa12.4□□□□□ -0.42
HDAC6-209ENST00000440653 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.42
HDAC6-209ENST00000440653 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
HDAC6-209ENST00000440653 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDAC6-209ENST00000440653 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
HDAC6-209ENST00000440653 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
HDAC6-209ENST00000440653 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
HDAC6-209ENST00000440653 SUPT16HQ9Y5B9 1047 aaKnown RBP12.39□□□□□ -0.43
HDAC6-209ENST00000440653 RGPD1P0DJD0 1748 aa12.38□□□□□ -0.43
HDAC6-209ENST00000440653 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-209ENST00000440653 VPS72Q15906 364 aa12.38□□□□□ -0.43
HDAC6-209ENST00000440653 POLR3GLQ9BT43 218 aa12.38□□□□□ -0.43
HDAC6-209ENST00000440653 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
HDAC6-209ENST00000440653 A0A0G2JS52 829 aa12.37□□□□□ -0.43
HDAC6-209ENST00000440653 MYT1Q01538 1121 aa12.37□□□□□ -0.43
HDAC6-209ENST00000440653 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
HDAC6-209ENST00000440653 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
HDAC6-209ENST00000440653 NPC1L1Q9UHC9 1359 aa12.37□□□□□ -0.43
HDAC6-209ENST00000440653 DISP2A7MBM2 1401 aa12.37□□□□□ -0.43
HDAC6-209ENST00000440653 KCNQ2O43526 872 aa12.36□□□□□ -0.43
HDAC6-209ENST00000440653 TNS1Q9HBL0 1735 aaKnown RBP12.36□□□□□ -0.43
HDAC6-209ENST00000440653 METP08581 1390 aa12.35□□□□□ -0.43
HDAC6-209ENST00000440653 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
HDAC6-209ENST00000440653 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
HDAC6-209ENST00000440653 GIGYF1O75420 1035 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-209ENST00000440653 PXDNQ92626 1479 aa12.33□□□□□ -0.44
HDAC6-209ENST00000440653 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.44
HDAC6-209ENST00000440653 SMG6Q86US8 1419 aaKnown RBP12.32□□□□□ -0.44
HDAC6-209ENST00000440653 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
HDAC6-209ENST00000440653 CHD4Q14839 1912 aa12.32□□□□□ -0.44
HDAC6-209ENST00000440653 FOXO3O43524 673 aa12.31□□□□□ -0.44
HDAC6-209ENST00000440653 TRIM37O94972 964 aa12.31□□□□□ -0.44
HDAC6-209ENST00000440653 TMC1Q8TDI8 760 aa12.31□□□□□ -0.44
HDAC6-209ENST00000440653 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
HDAC6-209ENST00000440653 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
HDAC6-209ENST00000440653 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
HDAC6-209ENST00000440653 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
HDAC6-209ENST00000440653 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
HDAC6-209ENST00000440653 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-209ENST00000440653 APBA3O96018 575 aa12.29□□□□□ -0.44
HDAC6-209ENST00000440653 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
HDAC6-209ENST00000440653 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
HDAC6-209ENST00000440653 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-209ENST00000440653 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
HDAC6-209ENST00000440653 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
HDAC6-209ENST00000440653 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
HDAC6-209ENST00000440653 PLCH1Q4KWH8 1693 aa12.28□□□□□ -0.44
HDAC6-209ENST00000440653 DLC1Q96QB1 1528 aa12.27□□□□□ -0.44
HDAC6-209ENST00000440653 RREB1Q92766 1687 aa12.27□□□□□ -0.45
HDAC6-209ENST00000440653 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-209ENST00000440653 NBPF14Q5TI25 921 aa12.27□□□□□ -0.45
HDAC6-209ENST00000440653 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
HDAC6-209ENST00000440653 C14orf93Q9H972 538 aaKnown RBP12.27□□□□□ -0.45
HDAC6-209ENST00000440653 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.45
HDAC6-209ENST00000440653 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
HDAC6-209ENST00000440653 CAPN15O75808 1086 aa12.26□□□□□ -0.45
HDAC6-209ENST00000440653 PUS7Q96PZ0 661 aaKnown RBP12.26□□□□□ -0.45
HDAC6-209ENST00000440653 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
HDAC6-209ENST00000440653 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-209ENST00000440653 PANK3Q9H999 370 aa12.25□□□□□ -0.45
HDAC6-209ENST00000440653 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
HDAC6-209ENST00000440653 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
HDAC6-209ENST00000440653 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
HDAC6-209ENST00000440653 FKBP8Q14318 412 aa12.24□□□□□ -0.45
HDAC6-209ENST00000440653 SPATA31A3Q5VYP0 1347 aa12.24□□□□□ -0.45
HDAC6-209ENST00000440653 ADGRB2O60241 1585 aa12.23□□□□□ -0.45
HDAC6-209ENST00000440653 NSD2O96028 1365 aa12.23□□□□□ -0.45
HDAC6-209ENST00000440653 ROBO2Q9HCK4 1378 aa12.23□□□□□ -0.45
HDAC6-209ENST00000440653 SYT17Q9BSW7 474 aa12.23□□□□□ -0.45
HDAC6-209ENST00000440653 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
HDAC6-209ENST00000440653 NUTM2FA1L443 756 aa12.22□□□□□ -0.45
HDAC6-209ENST00000440653 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-209ENST00000440653 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-209ENST00000440653 SLC34A2O95436 690 aa12.21□□□□□ -0.45
HDAC6-209ENST00000440653 PTGER2P43116 358 aa12.21□□□□□ -0.45
HDAC6-209ENST00000440653 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
HDAC6-209ENST00000440653 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
HDAC6-209ENST00000440653 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
HDAC6-209ENST00000440653 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-209ENST00000440653 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
HDAC6-209ENST00000440653 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
HDAC6-209ENST00000440653 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-209ENST00000440653 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
HDAC6-209ENST00000440653 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
HDAC6-209ENST00000440653 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
HDAC6-209ENST00000440653 BTG4Q9NY30 223 aa12.18□□□□□ -0.46
HDAC6-209ENST00000440653 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
HDAC6-209ENST00000440653 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
HDAC6-209ENST00000440653 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
HDAC6-209ENST00000440653 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
HDAC6-209ENST00000440653 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
HDAC6-209ENST00000440653 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-209ENST00000440653 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
HDAC6-209ENST00000440653 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
HDAC6-209ENST00000440653 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms