RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 CCDC9Q9Y3X0 531 aaKnown RBP8.35□□□□□ -1.07
PUM1-207ENST00000440538 SETBP1Q9Y6X0 1596 aa8.34□□□□□ -1.07
PUM1-207ENST00000440538 IFT172Q9UG01 1749 aa8.34□□□□□ -1.07
PUM1-207ENST00000440538 TULP4Q9NRJ4 1543 aa8.34□□□□□ -1.07
PUM1-207ENST00000440538 TTC21BQ7Z4L5 1316 aa8.34□□□□□ -1.07
PUM1-207ENST00000440538 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
PUM1-207ENST00000440538 STRN4Q9NRL3 753 aa8.34□□□□□ -1.07
PUM1-207ENST00000440538 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.07
PUM1-207ENST00000440538 HMOX1P09601 288 aa8.34□□□□□ -1.08
PUM1-207ENST00000440538 AMER1Q5JTC6 1135 aaPredicted RBP8.34□□□□□ -1.08
PUM1-207ENST00000440538 CERKQ8TCT0 537 aa8.34□□□□□ -1.08
PUM1-207ENST00000440538 RTN4Q9NQC3 1192 aaKnown RBP8.34□□□□□ -1.08
PUM1-207ENST00000440538 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
PUM1-207ENST00000440538 USHBP1Q8N6Y0 703 aa8.33□□□□□ -1.08
PUM1-207ENST00000440538 MED14O60244 1454 aa8.33□□□□□ -1.08
PUM1-207ENST00000440538 QRICH2Q9H0J4 1663 aa8.33□□□□□ -1.08
PUM1-207ENST00000440538 RRP7AQ9Y3A4 280 aaKnown RBP8.33□□□□□ -1.08
PUM1-207ENST00000440538 U2AF1L5P0DN76 240 aaPredicted RBP8.33□□□□□ -1.08
PUM1-207ENST00000440538 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.082e-8■□□□□ 9.5
PUM1-207ENST00000440538 PIK3R4Q99570 1358 aa8.32□□□□□ -1.08
PUM1-207ENST00000440538 ZNF692Q9BU19 519 aaPredicted RBP8.32□□□□□ -1.08
PUM1-207ENST00000440538 FAM135BQ49AJ0 1406 aa8.32□□□□□ -1.08
PUM1-207ENST00000440538 PPP2R1AP30153 589 aa8.32□□□□□ -1.08
PUM1-207ENST00000440538 CCDC136Q96JN2 1154 aa8.32□□□□□ -1.08
PUM1-207ENST00000440538 ADGRL3Q9HAR2 1447 aa8.32□□□□□ -1.08
PUM1-207ENST00000440538 SIRT1Q96EB6 747 aa8.31□□□□□ -1.08
PUM1-207ENST00000440538 HSP90AB2PQ58FF8 381 aa8.31□□□□□ -1.08
PUM1-207ENST00000440538 STRCQ7RTU9 1775 aa8.31□□□□□ -1.08
PUM1-207ENST00000440538 ANKRD36BQ8N2N9 1353 aa8.31□□□□□ -1.08
PUM1-207ENST00000440538 NPHP3Q7Z494 1330 aa8.31□□□□□ -1.08
PUM1-207ENST00000440538 ARHGEF28Q8N1W1 1705 aaKnown RBP8.31□□□□□ -1.08
PUM1-207ENST00000440538 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
PUM1-207ENST00000440538 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.3□□□□□ -1.08
PUM1-207ENST00000440538 LRRC7Q96NW7 1537 aa8.3□□□□□ -1.08
PUM1-207ENST00000440538 ZNF142P52746 1687 aaPredicted RBP8.3□□□□□ -1.08
PUM1-207ENST00000440538 NLRP13Q86W25 1043 aa8.3□□□□□ -1.08
PUM1-207ENST00000440538 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
PUM1-207ENST00000440538 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
PUM1-207ENST00000440538 PTCH1Q13635 1447 aa8.3□□□□□ -1.08
PUM1-207ENST00000440538 C1orf167Q5SNV9 1468 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 HSPA1LP34931 641 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 LRRC59Q96AG4 307 aaKnown RBP8.29□□□□□ -1.08
PUM1-207ENST00000440538 EVA1CP58658 441 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 CFAP53Q96M91 514 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 C8orf37Q96NL8 207 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 NLRP2Q9NX02 1062 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 MYBBP1AQ9BQG0 1328 aaKnown RBP8.29□□□□□ -1.08
PUM1-207ENST00000440538 DIP2AQ14689 1571 aa8.29□□□□□ -1.08
PUM1-207ENST00000440538 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
PUM1-207ENST00000440538 TECPR2O15040 1411 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 GCP02774 474 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 ATP7BP35670 1465 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 RALBP1Q15311 655 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 NOP58Q9Y2X3 529 aaKnown RBP8.28□□□□□ -1.08
PUM1-207ENST00000440538 LAMC1P11047 1609 aa8.28□□□□□ -1.08
PUM1-207ENST00000440538 NKTRP30414 1462 aaKnown RBP8.28□□□□□ -1.08
PUM1-207ENST00000440538 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
PUM1-207ENST00000440538 LAS1LQ9Y4W2 734 aaKnown RBP8.27□□□□□ -1.09
PUM1-207ENST00000440538 MAP3K19Q56UN5 1328 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 KDM5AP29375 1690 aaKnown RBP8.26□□□□□ -1.09
PUM1-207ENST00000440538 AEBP1Q8IUX7 1158 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 NGLY1Q96IV0 654 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
PUM1-207ENST00000440538 USP6P35125 1406 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 MST1RQ04912 1400 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 KIAA1210Q9ULL0 1709 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 STRCP1A6NGW2 1772 aa8.26□□□□□ -1.09
PUM1-207ENST00000440538 DIAPH1O60610 1272 aaKnown RBP8.25□□□□□ -1.09
PUM1-207ENST00000440538 CPS1P31327 1500 aa8.25□□□□□ -1.09
PUM1-207ENST00000440538 SULT6B1Q6IMI4 303 aa8.25□□□□□ -1.09
PUM1-207ENST00000440538 RGPD8O14715 1765 aaPredicted RBP8.25□□□□□ -1.09
PUM1-207ENST00000440538 SETD1AO15047 1707 aaKnown RBP8.25□□□□□ -1.09
PUM1-207ENST00000440538 CHD2O14647 1828 aaKnown RBP8.25□□□□□ -1.09
PUM1-207ENST00000440538 DLC1Q96QB1 1528 aa8.25□□□□□ -1.09
PUM1-207ENST00000440538 TOM1L2Q6ZVM7 507 aa8.24□□□□□ -1.09
PUM1-207ENST00000440538 NUDCQ9Y266 331 aa8.24□□□□□ -1.09
PUM1-207ENST00000440538 AXIN2Q9Y2T1 843 aa8.24□□□□□ -1.09
PUM1-207ENST00000440538 APAF1O14727 1248 aa8.24□□□□□ -1.09
PUM1-207ENST00000440538 NEFMP07197 916 aa8.24□□□□□ -1.09
PUM1-207ENST00000440538 NPM2Q86SE8 214 aaKnown RBP8.24□□□□□ -1.09
PUM1-207ENST00000440538 BTG4Q9NY30 223 aa8.24□□□□□ -1.09
PUM1-207ENST00000440538 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
PUM1-207ENST00000440538 EDC4Q6P2E9 1401 aaKnown RBP8.23□□□□□ -1.09
PUM1-207ENST00000440538 CD163L1Q9NR16 1453 aa8.23□□□□□ -1.09
PUM1-207ENST00000440538 THUMPD2Q9BTF0 503 aaKnown RBP8.23□□□□□ -1.09
PUM1-207ENST00000440538 KIAA0232Q92628 1395 aa8.23□□□□□ -1.09
PUM1-207ENST00000440538 PRKAR2BP31323 418 aa8.22□□□□□ -1.09
PUM1-207ENST00000440538 SPATA31A3Q5VYP0 1347 aa8.22□□□□□ -1.09
PUM1-207ENST00000440538 MAPK8IP3Q9UPT6 1336 aa8.22□□□□□ -1.09
PUM1-207ENST00000440538 DCTN1Q14203 1278 aa8.22□□□□□ -1.09
PUM1-207ENST00000440538 DDX54Q8TDD1 881 aaKnown RBP8.22□□□□□ -1.09
PUM1-207ENST00000440538 XRN1Q8IZH2 1706 aaKnown RBP8.22□□□□□ -1.09
PUM1-207ENST00000440538 EIF4A2Q14240 407 aaKnown RBP8.22□□□□□ -1.09
PUM1-207ENST00000440538 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
PUM1-207ENST00000440538 ANKRD24Q8TF21 1146 aa8.22□□□□□ -1.09
PUM1-207ENST00000440538 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms