RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 FYB1O15117 783 aa17.49■□□□□ 0.39
ACTN4-204ENST00000440400 HDGFL2Q7Z4V5 671 aaPredicted RBP17.49■□□□□ 0.39
ACTN4-204ENST00000440400 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
ACTN4-204ENST00000440400 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
ACTN4-204ENST00000440400 ANKARQ7Z5J8 1434 aa17.48■□□□□ 0.39
ACTN4-204ENST00000440400 AATKQ6ZMQ8 1374 aa17.48■□□□□ 0.39
ACTN4-204ENST00000440400 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
ACTN4-204ENST00000440400 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
ACTN4-204ENST00000440400 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
ACTN4-204ENST00000440400 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
ACTN4-204ENST00000440400 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.39
ACTN4-204ENST00000440400 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
ACTN4-204ENST00000440400 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
ACTN4-204ENST00000440400 PLEKHG3A1L390 1219 aa17.44■□□□□ 0.38
ACTN4-204ENST00000440400 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
ACTN4-204ENST00000440400 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
ACTN4-204ENST00000440400 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
ACTN4-204ENST00000440400 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
ACTN4-204ENST00000440400 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
ACTN4-204ENST00000440400 MTHFSP49914 203 aa17.42■□□□□ 0.38
ACTN4-204ENST00000440400 RGPD1P0DJD0 1748 aa17.42■□□□□ 0.38
ACTN4-204ENST00000440400 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
ACTN4-204ENST00000440400 CCDC27Q2M243 656 aa17.42■□□□□ 0.38
ACTN4-204ENST00000440400 USP6P35125 1406 aa17.41■□□□□ 0.38
ACTN4-204ENST00000440400 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
ACTN4-204ENST00000440400 CFAP53Q96M91 514 aa17.4■□□□□ 0.38
ACTN4-204ENST00000440400 PIK3C2AO00443 1686 aa17.4■□□□□ 0.38
ACTN4-204ENST00000440400 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
ACTN4-204ENST00000440400 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
ACTN4-204ENST00000440400 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
ACTN4-204ENST00000440400 PPP4R2Q9NY27 417 aa17.39■□□□□ 0.37
ACTN4-204ENST00000440400 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
ACTN4-204ENST00000440400 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
ACTN4-204ENST00000440400 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
ACTN4-204ENST00000440400 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
ACTN4-204ENST00000440400 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
ACTN4-204ENST00000440400 USP31Q70CQ4 1352 aa17.38■□□□□ 0.37
ACTN4-204ENST00000440400 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
ACTN4-204ENST00000440400 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
ACTN4-204ENST00000440400 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
ACTN4-204ENST00000440400 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
ACTN4-204ENST00000440400 NPHP4O75161 1426 aaPredicted RBP17.36■□□□□ 0.37
ACTN4-204ENST00000440400 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
ACTN4-204ENST00000440400 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
ACTN4-204ENST00000440400 APAF1O14727 1248 aa17.34■□□□□ 0.37
ACTN4-204ENST00000440400 ANKLE2Q86XL3 938 aa17.34■□□□□ 0.37
ACTN4-204ENST00000440400 PHRF1Q9P1Y6 1649 aaKnown RBP17.34■□□□□ 0.37
ACTN4-204ENST00000440400 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
ACTN4-204ENST00000440400 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
ACTN4-204ENST00000440400 E9PSI1 815 aa17.32■□□□□ 0.36
ACTN4-204ENST00000440400 CCDC146Q8IYE0 955 aa17.32■□□□□ 0.36
ACTN4-204ENST00000440400 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
ACTN4-204ENST00000440400 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
ACTN4-204ENST00000440400 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
ACTN4-204ENST00000440400 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
ACTN4-204ENST00000440400 ACEP12821 1306 aa17.3■□□□□ 0.36
ACTN4-204ENST00000440400 NCKAP5LQ9HCH0 1330 aa17.3■□□□□ 0.36
ACTN4-204ENST00000440400 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
ACTN4-204ENST00000440400 KCNA6P17658 529 aa17.29■□□□□ 0.36
ACTN4-204ENST00000440400 UBE2Q2Q8WVN8 375 aa17.29■□□□□ 0.36
ACTN4-204ENST00000440400 NME9Q86XW9 330 aa17.28■□□□□ 0.36
ACTN4-204ENST00000440400 KIF1AQ12756 1690 aa17.28■□□□□ 0.36
ACTN4-204ENST00000440400 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-204ENST00000440400 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.36
ACTN4-204ENST00000440400 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
ACTN4-204ENST00000440400 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-204ENST00000440400 MST1RQ04912 1400 aa17.26■□□□□ 0.35
ACTN4-204ENST00000440400 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
ACTN4-204ENST00000440400 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
ACTN4-204ENST00000440400 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-204ENST00000440400 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
ACTN4-204ENST00000440400 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
ACTN4-204ENST00000440400 IL16Q14005 1332 aa17.25■□□□□ 0.35
ACTN4-204ENST00000440400 IL13P35225 146 aa17.25■□□□□ 0.35
ACTN4-204ENST00000440400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
ACTN4-204ENST00000440400 KIF24Q5T7B8 1368 aa17.24■□□□□ 0.35
ACTN4-204ENST00000440400 FCHSD2O94868 740 aa17.24■□□□□ 0.35
ACTN4-204ENST00000440400 COG3Q96JB2 828 aa17.24■□□□□ 0.35
ACTN4-204ENST00000440400 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
ACTN4-204ENST00000440400 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
ACTN4-204ENST00000440400 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
ACTN4-204ENST00000440400 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
ACTN4-204ENST00000440400 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
ACTN4-204ENST00000440400 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
ACTN4-204ENST00000440400 NFAT5O94916 1531 aa17.21■□□□□ 0.35
ACTN4-204ENST00000440400 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
ACTN4-204ENST00000440400 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
ACTN4-204ENST00000440400 SLIT3O75094 1523 aa17.2■□□□□ 0.34
ACTN4-204ENST00000440400 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
ACTN4-204ENST00000440400 DCCP43146 1447 aa17.19■□□□□ 0.34
ACTN4-204ENST00000440400 LTN1O94822 1766 aa17.19■□□□□ 0.34
ACTN4-204ENST00000440400 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
ACTN4-204ENST00000440400 XIRP1Q702N8 1843 aaKnown RBP17.19■□□□□ 0.34
ACTN4-204ENST00000440400 CAMTA1Q9Y6Y1 1673 aa17.19■□□□□ 0.34
ACTN4-204ENST00000440400 CT47B1P0C2W7 299 aaPredicted RBP17.18■□□□□ 0.34
ACTN4-204ENST00000440400 ALS2Q96Q42 1657 aa17.18■□□□□ 0.34
ACTN4-204ENST00000440400 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
ACTN4-204ENST00000440400 STRCQ7RTU9 1775 aa17.18■□□□□ 0.34
ACTN4-204ENST00000440400 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
ACTN4-204ENST00000440400 SBNO1A3KN83 1393 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms