RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 RUNDC1Q96C34 613 aa9.09□□□□□ -0.95
TSC1-203ENST00000440111 PDE4AP27815 886 aa9.09□□□□□ -0.95
TSC1-203ENST00000440111 SEPT7Q16181 437 aaKnown RBP9.09□□□□□ -0.96
TSC1-203ENST00000440111 LUC7LQ9NQ29 371 aaKnown RBP9.08□□□□□ -0.96
TSC1-203ENST00000440111 PLCD4Q9BRC7 762 aa9.08□□□□□ -0.96
TSC1-203ENST00000440111 HOMER1Q86YM7 354 aa9.08□□□□□ -0.96
TSC1-203ENST00000440111 DDX19BQ9UMR2 479 aa9.08□□□□□ -0.96
TSC1-203ENST00000440111 CHMP5Q9NZZ3 219 aa9.08□□□□□ -0.96
TSC1-203ENST00000440111 ST18O60284 1047 aa9.08□□□□□ -0.96
TSC1-203ENST00000440111 STAMBPO95630 424 aa9.08□□□□□ -0.96
TSC1-203ENST00000440111 DHX8Q14562 1220 aaKnown RBP9.08□□□□□ -0.96
TSC1-203ENST00000440111 PCMTD1Q96MG8 357 aaPredicted RBP9.08□□□□□ -0.96
TSC1-203ENST00000440111 RABEP1Q15276 862 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 STK31Q9BXU1 1019 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 FAM13BQ9NYF5 915 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 PLXNC1O60486 1568 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 DYDC1Q8WWB3 177 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 H3BQV1 296 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 MAP3K9P80192 1104 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 ZKSCAN2Q63HK3 967 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 SKOR2Q2VWA4 1001 aaPredicted RBP9.07□□□□□ -0.96
TSC1-203ENST00000440111 SPATA24Q86W54 205 aa9.07□□□□□ -0.96
TSC1-203ENST00000440111 MAPK8IP2Q13387 824 aaPredicted RBP9.06□□□□□ -0.96
TSC1-203ENST00000440111 BECN2A8MW95 431 aa9.06□□□□□ -0.96
TSC1-203ENST00000440111 MAGI3Q5TCQ9 1506 aa9.06□□□□□ -0.96
TSC1-203ENST00000440111 GBP2P32456 591 aaPredicted RBP9.06□□□□□ -0.96
TSC1-203ENST00000440111 HSP90AB4PQ58FF6 505 aa9.06□□□□□ -0.96
TSC1-203ENST00000440111 CCDC66A2RUB6 948 aa9.06□□□□□ -0.96
TSC1-203ENST00000440111 GZF1Q9H116 711 aaPredicted RBP9.06□□□□□ -0.96
TSC1-203ENST00000440111 SYCP1Q15431 976 aa9.06□□□□□ -0.96
TSC1-203ENST00000440111 PRDM15P57071 1507 aaPredicted RBP9.05□□□□□ -0.96
TSC1-203ENST00000440111 POLR3AO14802 1390 aaPredicted RBP9.05□□□□□ -0.96
TSC1-203ENST00000440111 WDHD1O75717 1129 aaPredicted RBP9.05□□□□□ -0.96
TSC1-203ENST00000440111 BLMP54132 1417 aaPredicted RBP9.05□□□□□ -0.96
TSC1-203ENST00000440111 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 CCDC175P0C221 793 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 HOMEZQ8IX15 550 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 IL16Q14005 1332 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 HMGN5P82970 282 aaKnown RBP9.05□□□□□ -0.96
TSC1-203ENST00000440111 H0YHG0 523 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 ADGRL1O94910 1474 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 MYOM2P54296 1465 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 ZNF518AQ6AHZ1 1483 aa9.05□□□□□ -0.96
TSC1-203ENST00000440111 ZFYVE27Q5T4F4 411 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 CCAR2Q8N163 923 aaKnown RBP9.04□□□□□ -0.96
TSC1-203ENST00000440111 OFD1O75665 1012 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 BRMS1Q9HCU9 246 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 LAMC1P11047 1609 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 API5Q9BZZ5 524 aaKnown RBP9.04□□□□□ -0.96
TSC1-203ENST00000440111 GOLGA6L10A6NI86 522 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 AEBP1Q8IUX7 1158 aa9.04□□□□□ -0.96
TSC1-203ENST00000440111 CEP170Q5SW79 1584 aa9.03□□□□□ -0.96
TSC1-203ENST00000440111 CCDC9Q9Y3X0 531 aaKnown RBP9.03□□□□□ -0.96
TSC1-203ENST00000440111 FAM184AQ8NB25 1140 aa9.03□□□□□ -0.96
TSC1-203ENST00000440111 NEURL4Q96JN8 1562 aa9.03□□□□□ -0.96
TSC1-203ENST00000440111 ZNHIT6Q9NWK9 470 aaKnown RBP9.03□□□□□ -0.96
TSC1-203ENST00000440111 ASXL1Q8IXJ9 1541 aa9.03□□□□□ -0.96
TSC1-203ENST00000440111 OSCARQ8IYS5 282 aa9.03□□□□□ -0.96
TSC1-203ENST00000440111 FRAT1Q92837 279 aaPredicted RBP9.03□□□□□ -0.96
TSC1-203ENST00000440111 NKTRP30414 1462 aaKnown RBP9.03□□□□□ -0.96
TSC1-203ENST00000440111 ERICH2A1L162 156 aa9.02□□□□□ -0.96
TSC1-203ENST00000440111 ANKRD36BQ8N2N9 1353 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 KDM5BQ9UGL1 1544 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 U2SURPO15042 1029 aaKnown RBP9.02□□□□□ -0.97
TSC1-203ENST00000440111 CCP110O43303 1012 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 DDX23Q9BUQ8 820 aaKnown RBP9.02□□□□□ -0.97
TSC1-203ENST00000440111 XBP1P17861 261 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 USP8P40818 1118 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 CCDC91Q7Z6B0 441 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 CLUAP1Q96AJ1 413 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 TOMM22Q9NS69 142 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 ANKRD18BA2A2Z9 1011 aa9.02□□□□□ -0.97
TSC1-203ENST00000440111 MTERF4Q7Z6M4 381 aaKnown RBP9.01□□□□□ -0.97
TSC1-203ENST00000440111 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
TSC1-203ENST00000440111 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
TSC1-203ENST00000440111 PIP4K2AP48426 406 aaPredicted RBP9.01□□□□□ -0.97
TSC1-203ENST00000440111 GNAI1P63096 354 aa9.01□□□□□ -0.97
TSC1-203ENST00000440111 CLASRPQ8N2M8 674 aaKnown RBP9.01□□□□□ -0.97
TSC1-203ENST00000440111 BACH2Q9BYV9 841 aa9.01□□□□□ -0.97
TSC1-203ENST00000440111 SYCP2Q9BX26 1530 aa9.01□□□□□ -0.97
TSC1-203ENST00000440111 VPS37DQ86XT2 251 aa9.01□□□□□ -0.97
TSC1-203ENST00000440111 NAP1L1P55209 391 aaKnown RBP9.01□□□□□ -0.97
TSC1-203ENST00000440111 SAFBQ15424 915 aaKnown RBP eCLIP9.01□□□□□ -0.97
TSC1-203ENST00000440111 PTPRTO14522 1441 aa9□□□□□ -0.97
TSC1-203ENST00000440111 U2AF1L5P0DN76 240 aaPredicted RBP9□□□□□ -0.97
TSC1-203ENST00000440111 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
TSC1-203ENST00000440111 U2AF1Q01081 240 aaKnown RBP eCLIP9□□□□□ -0.976e-10■■■■□ 20.2
TSC1-203ENST00000440111 NOL12Q9UGY1 213 aaKnown RBP eCLIP9□□□□□ -0.97
TSC1-203ENST00000440111 V9GYY5 206 aaPredicted RBP9□□□□□ -0.97
TSC1-203ENST00000440111 MNS1Q8NEH6 495 aa9□□□□□ -0.97
TSC1-203ENST00000440111 TRDNQ13061 729 aa9□□□□□ -0.97
TSC1-203ENST00000440111 TRPM2O94759 1503 aa9□□□□□ -0.97
TSC1-203ENST00000440111 FANCAO15360 1455 aa9□□□□□ -0.97
TSC1-203ENST00000440111 NEO1Q92859 1461 aa9□□□□□ -0.97
TSC1-203ENST00000440111 TAF3Q5VWG9 929 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms