RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
GSE1-206ENST00000438180 COL3A1P02461 1466 aaPredicted RBP22.14■■□□□ 1.14
GSE1-206ENST00000438180 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.14
GSE1-206ENST00000438180 PNPLA6Q8IY17 1366 aa22.14■■□□□ 1.13
GSE1-206ENST00000438180 CCDC146Q8IYE0 955 aa22.14■■□□□ 1.13
GSE1-206ENST00000438180 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
GSE1-206ENST00000438180 NME9Q86XW9 330 aa22.12■■□□□ 1.13
GSE1-206ENST00000438180 TTC21BQ7Z4L5 1316 aa22.12■■□□□ 1.13
GSE1-206ENST00000438180 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
GSE1-206ENST00000438180 MAP2P11137 1827 aaKnown RBP22.12■■□□□ 1.13
GSE1-206ENST00000438180 NUTM2FA1L443 756 aa22.11■■□□□ 1.13
GSE1-206ENST00000438180 APAF1O14727 1248 aa22.11■■□□□ 1.13
GSE1-206ENST00000438180 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
GSE1-206ENST00000438180 RGPD8O14715 1765 aaPredicted RBP22.11■■□□□ 1.13
GSE1-206ENST00000438180 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
GSE1-206ENST00000438180 GOLGA2Q08379 1002 aa22.1■■□□□ 1.13
GSE1-206ENST00000438180 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
GSE1-206ENST00000438180 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
GSE1-206ENST00000438180 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
GSE1-206ENST00000438180 U2AF1L5P0DN76 240 aaPredicted RBP22.09■■□□□ 1.13
GSE1-206ENST00000438180 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.13
GSE1-206ENST00000438180 PELP1Q8IZL8 1130 aaKnown RBP22.09■■□□□ 1.13
GSE1-206ENST00000438180 NGDNQ8NEJ9 315 aaKnown RBP22.09■■□□□ 1.13
GSE1-206ENST00000438180 RNF123Q5XPI4 1314 aa22.09■■□□□ 1.13
GSE1-206ENST00000438180 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
GSE1-206ENST00000438180 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.13
GSE1-206ENST00000438180 POLKQ9UBT6 870 aa22.08■■□□□ 1.12
GSE1-206ENST00000438180 SSH2Q76I76 1423 aa22.08■■□□□ 1.12
GSE1-206ENST00000438180 CDCA7LQ96GN5 454 aa22.06■■□□□ 1.12
GSE1-206ENST00000438180 OVOS2A0A0J9YW53 1432 aa22.06■■□□□ 1.12
GSE1-206ENST00000438180 OVOS2Q6IE36 1432 aa22.06■■□□□ 1.12
GSE1-206ENST00000438180 RCAN3Q9UKA8 241 aa22.06■■□□□ 1.12
GSE1-206ENST00000438180 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
GSE1-206ENST00000438180 PMFBP1Q8TBY8 1022 aa22.04■■□□□ 1.12
GSE1-206ENST00000438180 E9PSI1 815 aa22.03■■□□□ 1.12
GSE1-206ENST00000438180 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
GSE1-206ENST00000438180 PPM1GO15355 546 aaPredicted RBP22.02■■□□□ 1.12
GSE1-206ENST00000438180 CCDC27Q2M243 656 aa22.02■■□□□ 1.12
GSE1-206ENST00000438180 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
GSE1-206ENST00000438180 ZRANB1Q9UGI0 708 aa22.01■■□□□ 1.11
GSE1-206ENST00000438180 USP31Q70CQ4 1352 aa22.01■■□□□ 1.11
GSE1-206ENST00000438180 MAPK8IP3Q9UPT6 1336 aa22.01■■□□□ 1.11
GSE1-206ENST00000438180 SLFN5Q08AF3 891 aa22■■□□□ 1.11
GSE1-206ENST00000438180 DUSP27Q5VZP5 1158 aa22■■□□□ 1.11
GSE1-206ENST00000438180 WWC1Q8IX03 1113 aa22■■□□□ 1.11
GSE1-206ENST00000438180 LRRC7Q96NW7 1537 aa21.99■■□□□ 1.11
GSE1-206ENST00000438180 FCHSD2O94868 740 aa21.99■■□□□ 1.11
GSE1-206ENST00000438180 IRX6P78412 446 aaPredicted RBP21.99■■□□□ 1.11
GSE1-206ENST00000438180 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
GSE1-206ENST00000438180 USP54Q70EL1 1684 aa21.99■■□□□ 1.11
GSE1-206ENST00000438180 NEFMP07197 916 aa21.98■■□□□ 1.11
GSE1-206ENST00000438180 PHF8Q9UPP1 1060 aa21.98■■□□□ 1.11
GSE1-206ENST00000438180 PROSER2Q86WR7 435 aaPredicted RBP21.97■■□□□ 1.11
GSE1-206ENST00000438180 WDR63Q8IWG1 891 aa21.97■■□□□ 1.11
GSE1-206ENST00000438180 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
GSE1-206ENST00000438180 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
GSE1-206ENST00000438180 PIK3C2AO00443 1686 aa21.97■■□□□ 1.11
GSE1-206ENST00000438180 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
GSE1-206ENST00000438180 RRP1P56182 461 aaKnown RBP21.96■■□□□ 1.11
GSE1-206ENST00000438180 PLEKHF1Q96S99 279 aa21.96■■□□□ 1.11
GSE1-206ENST00000438180 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
GSE1-206ENST00000438180 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
GSE1-206ENST00000438180 KDM4FA0A1W2PPD8 638 aa21.94■■□□□ 1.1
GSE1-206ENST00000438180 FBLN1P23142 703 aa21.93■■□□□ 1.1
GSE1-206ENST00000438180 IL13P35225 146 aa21.93■■□□□ 1.1
GSE1-206ENST00000438180 NEUROD2Q15784 382 aa21.93■■□□□ 1.1
GSE1-206ENST00000438180 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
GSE1-206ENST00000438180 DCCP43146 1447 aa21.92■■□□□ 1.1
GSE1-206ENST00000438180 RBM33Q96EV2 1170 aaKnown RBP21.92■■□□□ 1.1
GSE1-206ENST00000438180 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
GSE1-206ENST00000438180 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
GSE1-206ENST00000438180 KIF1AQ12756 1690 aa21.91■■□□□ 1.1
GSE1-206ENST00000438180 ESCO1Q5FWF5 840 aa21.91■■□□□ 1.1
GSE1-206ENST00000438180 TMPOP42166 694 aaKnown RBP21.9■■□□□ 1.1
GSE1-206ENST00000438180 RSPH6AQ9H0K4 717 aa21.9■■□□□ 1.1
GSE1-206ENST00000438180 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
GSE1-206ENST00000438180 NLRP6P59044 892 aa21.89■■□□□ 1.1
GSE1-206ENST00000438180 MYH16Q9H6N6 1097 aa21.89■■□□□ 1.09
GSE1-206ENST00000438180 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
GSE1-206ENST00000438180 HSPA2P54652 639 aa21.88■■□□□ 1.09
GSE1-206ENST00000438180 ABTB2Q8N961 1025 aa21.88■■□□□ 1.09
GSE1-206ENST00000438180 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.88■■□□□ 1.09
GSE1-206ENST00000438180 FLT4P35916 1363 aa21.88■■□□□ 1.09
GSE1-206ENST00000438180 PAK3O75914 559 aaPredicted RBP21.87■■□□□ 1.09
GSE1-206ENST00000438180 PRKAR2BP31323 418 aa21.87■■□□□ 1.09
GSE1-206ENST00000438180 PSME1Q06323 249 aa21.87■■□□□ 1.09
GSE1-206ENST00000438180 STRCP1A6NGW2 1772 aa21.86■■□□□ 1.09
GSE1-206ENST00000438180 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
GSE1-206ENST00000438180 SPINK5Q9NQ38 1064 aaPredicted RBP21.86■■□□□ 1.09
GSE1-206ENST00000438180 MARF1Q9Y4F3 1742 aaKnown RBP21.86■■□□□ 1.09
GSE1-206ENST00000438180 IL16Q14005 1332 aa21.86■■□□□ 1.09
GSE1-206ENST00000438180 TMEM94Q12767 1356 aa21.85■■□□□ 1.09
GSE1-206ENST00000438180 MAP3K19Q56UN5 1328 aa21.84■■□□□ 1.09
GSE1-206ENST00000438180 ATF3P18847 181 aa21.84■■□□□ 1.09
GSE1-206ENST00000438180 C1orf167Q5SNV9 1468 aa21.84■■□□□ 1.09
GSE1-206ENST00000438180 STRCQ7RTU9 1775 aa21.84■■□□□ 1.09
GSE1-206ENST00000438180 RIPK4P57078 832 aa21.83■■□□□ 1.09
GSE1-206ENST00000438180 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
GSE1-206ENST00000438180 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
GSE1-206ENST00000438180 HMOX1P09601 288 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms