RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 COG3Q96JB2 828 aa20.29■□□□□ 0.84
SGCE-205ENST00000437425 RNF123Q5XPI4 1314 aa20.28■□□□□ 0.84
SGCE-205ENST00000437425 ACEP12821 1306 aa20.27■□□□□ 0.84
SGCE-205ENST00000437425 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.84
SGCE-205ENST00000437425 ZNF521Q96K83 1311 aa20.27■□□□□ 0.84
SGCE-205ENST00000437425 USP6P35125 1406 aa20.27■□□□□ 0.84
SGCE-205ENST00000437425 NRKQ7Z2Y5 1582 aa20.26■□□□□ 0.83
SGCE-205ENST00000437425 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
SGCE-205ENST00000437425 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
SGCE-205ENST00000437425 FMN2Q9NZ56 1722 aa20.26■□□□□ 0.83
SGCE-205ENST00000437425 NWD1Q149M9 1564 aa20.25■□□□□ 0.83
SGCE-205ENST00000437425 TTC21BQ7Z4L5 1316 aa20.25■□□□□ 0.83
SGCE-205ENST00000437425 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
SGCE-205ENST00000437425 APAF1O14727 1248 aa20.24■□□□□ 0.83
SGCE-205ENST00000437425 DIAPH1O60610 1272 aaKnown RBP20.23■□□□□ 0.83
SGCE-205ENST00000437425 ADGRL3Q9HAR2 1447 aa20.23■□□□□ 0.83
SGCE-205ENST00000437425 NCKAP5LQ9HCH0 1330 aa20.23■□□□□ 0.83
SGCE-205ENST00000437425 NME9Q86XW9 330 aa20.22■□□□□ 0.83
SGCE-205ENST00000437425 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
SGCE-205ENST00000437425 NKTRP30414 1462 aaKnown RBP20.22■□□□□ 0.83
SGCE-205ENST00000437425 CDK12Q9NYV4 1490 aaPredicted RBP20.22■□□□□ 0.83
SGCE-205ENST00000437425 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
SGCE-205ENST00000437425 U2AF1L5P0DN76 240 aaPredicted RBP20.22■□□□□ 0.83
SGCE-205ENST00000437425 U2AF1Q01081 240 aaKnown RBP eCLIP20.22■□□□□ 0.83
SGCE-205ENST00000437425 CCDC27Q2M243 656 aa20.22■□□□□ 0.83
SGCE-205ENST00000437425 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
SGCE-205ENST00000437425 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
SGCE-205ENST00000437425 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
SGCE-205ENST00000437425 IQSEC2Q5JU85 1478 aa20.2■□□□□ 0.82
SGCE-205ENST00000437425 E9PSI1 815 aa20.2■□□□□ 0.82
SGCE-205ENST00000437425 OVOS2A0A0J9YW53 1432 aa20.19■□□□□ 0.82
SGCE-205ENST00000437425 OVOS2Q6IE36 1432 aa20.19■□□□□ 0.82
SGCE-205ENST00000437425 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
SGCE-205ENST00000437425 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
SGCE-205ENST00000437425 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
SGCE-205ENST00000437425 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 NUTM2FA1L443 756 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 FCHSD2O94868 740 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
SGCE-205ENST00000437425 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
SGCE-205ENST00000437425 LMTK3Q96Q04 1460 aa20.16■□□□□ 0.82
SGCE-205ENST00000437425 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
SGCE-205ENST00000437425 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
SGCE-205ENST00000437425 NEFMP07197 916 aa20.16■□□□□ 0.82
SGCE-205ENST00000437425 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
SGCE-205ENST00000437425 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
SGCE-205ENST00000437425 LRRC7Q96NW7 1537 aa20.15■□□□□ 0.82
SGCE-205ENST00000437425 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
SGCE-205ENST00000437425 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
SGCE-205ENST00000437425 PPP4R2Q9NY27 417 aa20.15■□□□□ 0.82
SGCE-205ENST00000437425 HSPA2P54652 639 aa20.14■□□□□ 0.81
SGCE-205ENST00000437425 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
SGCE-205ENST00000437425 RGPD8O14715 1765 aaPredicted RBP20.13■□□□□ 0.81
SGCE-205ENST00000437425 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
SGCE-205ENST00000437425 PHF8Q9UPP1 1060 aa20.12■□□□□ 0.81
SGCE-205ENST00000437425 RRP1P56182 461 aaKnown RBP20.12■□□□□ 0.81
SGCE-205ENST00000437425 USP54Q70EL1 1684 aa20.11■□□□□ 0.81
SGCE-205ENST00000437425 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
SGCE-205ENST00000437425 KIF24Q5T7B8 1368 aa20.1■□□□□ 0.81
SGCE-205ENST00000437425 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
SGCE-205ENST00000437425 PROSER2Q86WR7 435 aaPredicted RBP20.1■□□□□ 0.81
SGCE-205ENST00000437425 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
SGCE-205ENST00000437425 IL13P35225 146 aa20.09■□□□□ 0.81
SGCE-205ENST00000437425 EMILIN1Q9Y6C2 1016 aa20.09■□□□□ 0.81
SGCE-205ENST00000437425 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.81
SGCE-205ENST00000437425 DCCP43146 1447 aa20.08■□□□□ 0.8
SGCE-205ENST00000437425 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
SGCE-205ENST00000437425 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
SGCE-205ENST00000437425 TMPOP42166 694 aaKnown RBP20.06■□□□□ 0.8
SGCE-205ENST00000437425 IRX6P78412 446 aaPredicted RBP20.06■□□□□ 0.8
SGCE-205ENST00000437425 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
SGCE-205ENST00000437425 IL16Q14005 1332 aa20.06■□□□□ 0.8
SGCE-205ENST00000437425 PIK3C2AO00443 1686 aa20.05■□□□□ 0.8
SGCE-205ENST00000437425 SBNO1A3KN83 1393 aa20.04■□□□□ 0.8
SGCE-205ENST00000437425 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
SGCE-205ENST00000437425 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
SGCE-205ENST00000437425 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
SGCE-205ENST00000437425 KIF1AQ12756 1690 aa20.03■□□□□ 0.8
SGCE-205ENST00000437425 FLT4P35916 1363 aa20.03■□□□□ 0.8
SGCE-205ENST00000437425 CT47B1P0C2W7 299 aaPredicted RBP20.02■□□□□ 0.8
SGCE-205ENST00000437425 NLRP6P59044 892 aa20.02■□□□□ 0.8
SGCE-205ENST00000437425 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
SGCE-205ENST00000437425 FBLN1P23142 703 aa20.02■□□□□ 0.79
SGCE-205ENST00000437425 PSME1Q06323 249 aa20.02■□□□□ 0.79
SGCE-205ENST00000437425 ABTB2Q8N961 1025 aa20.02■□□□□ 0.79
SGCE-205ENST00000437425 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.79
SGCE-205ENST00000437425 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
SGCE-205ENST00000437425 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
SGCE-205ENST00000437425 ATF3P18847 181 aa19.99■□□□□ 0.79
SGCE-205ENST00000437425 RIPK4P57078 832 aa19.99■□□□□ 0.79
SGCE-205ENST00000437425 CERKQ8TCT0 537 aa19.99■□□□□ 0.79
SGCE-205ENST00000437425 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
SGCE-205ENST00000437425 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
SGCE-205ENST00000437425 NFE2L2Q16236 605 aa19.98■□□□□ 0.79
SGCE-205ENST00000437425 KCNH5Q8NCM2 988 aa19.98■□□□□ 0.79
SGCE-205ENST00000437425 MAP3K19Q56UN5 1328 aa19.98■□□□□ 0.79
SGCE-205ENST00000437425 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms