RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 CENPJQ9HC77 1338 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 JCADQ9P266 1359 aa8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 NHSL1Q5SYE7 1610 aa8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 GSE1Q14687 1217 aa8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 MEX3CQ5U5Q3 659 aaKnown RBP8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 PRR36Q9H6K5 1346 aa8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 MED1Q15648 1581 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 AHDC1Q5TGY3 1603 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 USP32Q8NFA0 1604 aa8.18□□□□□ -1.1
HMGB3P24-201ENST00000433260 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P24-201ENST00000433260 CHRDL2Q6WN34 429 aa8.17□□□□□ -1.1
HMGB3P24-201ENST00000433260 NGDNQ8NEJ9 315 aaKnown RBP8.17□□□□□ -1.1
HMGB3P24-201ENST00000433260 SOS2Q07890 1332 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P24-201ENST00000433260 NPHP3Q7Z494 1330 aa8.17□□□□□ -1.1
HMGB3P24-201ENST00000433260 QRICH2Q9H0J4 1663 aa8.17□□□□□ -1.1
HMGB3P24-201ENST00000433260 PAK3O75914 559 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P24-201ENST00000433260 ADAMTS2O95450 1211 aa8.16□□□□□ -1.1
HMGB3P24-201ENST00000433260 ILDR2Q71H61 639 aa8.16□□□□□ -1.1
HMGB3P24-201ENST00000433260 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.1
HMGB3P24-201ENST00000433260 CLSPNQ9HAW4 1339 aa8.15□□□□□ -1.1
HMGB3P24-201ENST00000433260 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
HMGB3P24-201ENST00000433260 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
HMGB3P24-201ENST00000433260 RGS17Q9UGC6 210 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P24-201ENST00000433260 TIMELESSQ9UNS1 1208 aa8.15□□□□□ -1.1
HMGB3P24-201ENST00000433260 PNPLA6Q8IY17 1366 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 ACEP12821 1306 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 EVC2Q86UK5 1308 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 PRKAR2AP13861 404 aaKnown RBP8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 HAP1P54257 671 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 NUTM2GQ5VZR2 741 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 FAM212AQ96EL1 285 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 CABP1Q9NZU7 370 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 CCDC61Q9Y6R9 512 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 KIF1AQ12756 1690 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 SHPRHQ149N8 1683 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 ADGRB2O60241 1585 aa8.14□□□□□ -1.11
HMGB3P24-201ENST00000433260 TULP4Q9NRJ4 1543 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 PXDNQ92626 1479 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 EIF3AQ14152 1382 aaKnown RBP8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 GPRASP1Q5JY77 1395 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 SPATA31A3Q5VYP0 1347 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 CHADLQ6NUI6 762 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 NGLY1Q96IV0 654 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 LRP6O75581 1613 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 RALGAPBQ86X10 1494 aa8.13□□□□□ -1.11
HMGB3P24-201ENST00000433260 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 FXR2P51116 673 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 NUBP1P53384 320 aa8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 POTEAQ6S8J7 498 aa8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 TMC1Q8TDI8 760 aa8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 ITSN1Q15811 1721 aa8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
HMGB3P24-201ENST00000433260 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
HMGB3P24-201ENST00000433260 MNX1P50219 401 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P24-201ENST00000433260 FARP1Q9Y4F1 1045 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P24-201ENST00000433260 ATP7BP35670 1465 aa8.11□□□□□ -1.11
HMGB3P24-201ENST00000433260 AFF2P51816 1311 aa8.1□□□□□ -1.11
HMGB3P24-201ENST00000433260 ABTB2Q8N961 1025 aa8.1□□□□□ -1.11
HMGB3P24-201ENST00000433260 ZNF772Q68DY9 489 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P24-201ENST00000433260 POLR3GLQ9BT43 218 aa8.09□□□□□ -1.11
HMGB3P24-201ENST00000433260 SLC12A5Q9H2X9 1139 aa8.09□□□□□ -1.11
HMGB3P24-201ENST00000433260 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
HMGB3P24-201ENST00000433260 SBNO1A3KN83 1393 aa8.09□□□□□ -1.12
HMGB3P24-201ENST00000433260 TOPAZ1Q8N9V7 1692 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 ZBTB7CA1YPR0 619 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 TESK2Q96S53 571 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 USP21Q9UK80 565 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 TNS3Q68CZ2 1445 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 TRPM3Q9HCF6 1732 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 USP47Q96K76 1375 aa8.08□□□□□ -1.12
HMGB3P24-201ENST00000433260 COL22A1Q8NFW1 1626 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 MARF1Q9Y4F3 1742 aaKnown RBP8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 FAM83GA6ND36 823 aa8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 ZC3H6P61129 1189 aaKnown RBP8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 TMF1P82094 1093 aa8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 POLR3AO14802 1390 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 ARHGEF10O15013 1369 aa8.07□□□□□ -1.12
HMGB3P24-201ENST00000433260 ALS2Q96Q42 1657 aa8.06□□□□□ -1.12
HMGB3P24-201ENST00000433260 SOX12O15370 315 aa8.06□□□□□ -1.12
HMGB3P24-201ENST00000433260 HSPA5P11021 654 aaKnown RBP8.06□□□□□ -1.12
HMGB3P24-201ENST00000433260 RXRBP28702 533 aa8.06□□□□□ -1.12
HMGB3P24-201ENST00000433260 NLRP6P59044 892 aa8.06□□□□□ -1.12
HMGB3P24-201ENST00000433260 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGB3P24-201ENST00000433260 SLC24A1O60721 1099 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 CHRNA2Q15822 529 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 RASEFQ8IZ41 740 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 ZRANB1Q9UGI0 708 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 ATAD2Q6PL18 1390 aa8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 KTN1Q86UP2 1357 aaKnown RBP8.05□□□□□ -1.12
HMGB3P24-201ENST00000433260 AKAP12Q02952 1782 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms