RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ACEP12821 1306 aa25.08■■□□□ 1.6
NUP50-208ENST00000430547 POLR3AO14802 1390 aaPredicted RBP25.07■■□□□ 1.6
NUP50-208ENST00000430547 PPIP5K1Q6PFW1 1433 aa25.07■■□□□ 1.6
NUP50-208ENST00000430547 NBPF8Q3BBV2 869 aa25.07■■□□□ 1.6
NUP50-208ENST00000430547 CABP2Q9NPB3 220 aa25.07■■□□□ 1.6
NUP50-208ENST00000430547 UNC5CLQ8IV45 518 aa25.06■■□□□ 1.6
NUP50-208ENST00000430547 EVC2Q86UK5 1308 aa25.06■■□□□ 1.6
NUP50-208ENST00000430547 PLEKHG3A1L390 1219 aa25.05■■□□□ 1.6
NUP50-208ENST00000430547 COL14A1Q05707 1796 aaKnown RBP25.04■■□□□ 1.6
NUP50-208ENST00000430547 RALGAPBQ86X10 1494 aa25.03■■□□□ 1.6
NUP50-208ENST00000430547 GJD4Q96KN9 370 aaPredicted RBP25.03■■□□□ 1.6
NUP50-208ENST00000430547 PHRF1Q9P1Y6 1649 aaKnown RBP25.03■■□□□ 1.6
NUP50-208ENST00000430547 CARD11Q9BXL7 1154 aa25.02■■□□□ 1.6
NUP50-208ENST00000430547 UPF1Q92900 1129 aaKnown RBP eCLIP25■■□□□ 1.59
NUP50-208ENST00000430547 GLI3P10071 1580 aa24.99■■□□□ 1.59
NUP50-208ENST00000430547 CCDC9Q9Y3X0 531 aaKnown RBP24.99■■□□□ 1.59
NUP50-208ENST00000430547 NRAPQ86VF7 1730 aa24.98■■□□□ 1.59
NUP50-208ENST00000430547 FAM83GA6ND36 823 aa24.98■■□□□ 1.59
NUP50-208ENST00000430547 NUTM2GQ5VZR2 741 aa24.97■■□□□ 1.59
NUP50-208ENST00000430547 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
NUP50-208ENST00000430547 ABTB2Q8N961 1025 aa24.96■■□□□ 1.59
NUP50-208ENST00000430547 PRDM11Q9NQV5 511 aa24.96■■□□□ 1.59
NUP50-208ENST00000430547 CABP1Q9NZU7 370 aa24.96■■□□□ 1.59
NUP50-208ENST00000430547 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
NUP50-208ENST00000430547 VPS72Q15906 364 aa24.95■■□□□ 1.58
NUP50-208ENST00000430547 BTG4Q9NY30 223 aa24.95■■□□□ 1.58
NUP50-208ENST00000430547 SBNO2Q9Y2G9 1366 aa24.93■■□□□ 1.58
NUP50-208ENST00000430547 USP6P35125 1406 aa24.93■■□□□ 1.58
NUP50-208ENST00000430547 AKAP12Q02952 1782 aa24.93■■□□□ 1.58
NUP50-208ENST00000430547 NRKQ7Z2Y5 1582 aa24.92■■□□□ 1.58
NUP50-208ENST00000430547 BRWD3Q6RI45 1802 aa24.91■■□□□ 1.58
NUP50-208ENST00000430547 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
NUP50-208ENST00000430547 NLRP13Q86W25 1043 aa24.9■■□□□ 1.58
NUP50-208ENST00000430547 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
NUP50-208ENST00000430547 ZC3H6P61129 1189 aaKnown RBP24.88■■□□□ 1.57
NUP50-208ENST00000430547 A0A0G2JS52 829 aa24.87■■□□□ 1.57
NUP50-208ENST00000430547 MYT1Q01538 1121 aa24.87■■□□□ 1.57
NUP50-208ENST00000430547 ZNF692Q9BU19 519 aaPredicted RBP24.86■■□□□ 1.57
NUP50-208ENST00000430547 USP19O94966 1318 aa24.86■■□□□ 1.57
NUP50-208ENST00000430547 PIK3C2AO00443 1686 aa24.85■■□□□ 1.57
NUP50-208ENST00000430547 CHRNA2Q15822 529 aa24.85■■□□□ 1.57
NUP50-208ENST00000430547 MON2Q7Z3U7 1717 aa24.84■■□□□ 1.57
NUP50-208ENST00000430547 SEPT12Q8IYM1 358 aa24.84■■□□□ 1.57
NUP50-208ENST00000430547 NLRP6P59044 892 aa24.83■■□□□ 1.57
NUP50-208ENST00000430547 CLSPNQ9HAW4 1339 aa24.83■■□□□ 1.56
NUP50-208ENST00000430547 EP400Q96L91 3159 aa24.82■■□□□ 1.56
NUP50-208ENST00000430547 CPDO75976 1380 aa24.81■■□□□ 1.56
NUP50-208ENST00000430547 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
NUP50-208ENST00000430547 GCP02774 474 aa24.81■■□□□ 1.56
NUP50-208ENST00000430547 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
NUP50-208ENST00000430547 SSH2Q76I76 1423 aa24.8■■□□□ 1.56
NUP50-208ENST00000430547 FAM98CQ17RN3 349 aaKnown RBP24.8■■□□□ 1.56
NUP50-208ENST00000430547 SPATA31A5Q5VU36 1347 aa24.8■■□□□ 1.56
NUP50-208ENST00000430547 SPATA31A7Q8IWB4 1347 aa24.8■■□□□ 1.56
NUP50-208ENST00000430547 CPSF1Q10570 1443 aaKnown RBP24.79■■□□□ 1.56
NUP50-208ENST00000430547 LMO7Q8WWI1 1683 aa24.79■■□□□ 1.56
NUP50-208ENST00000430547 ONECUT3O60422 494 aaPredicted RBP24.79■■□□□ 1.56
NUP50-208ENST00000430547 EVA1CP58658 441 aa24.79■■□□□ 1.56
NUP50-208ENST00000430547 TMC1Q8TDI8 760 aa24.79■■□□□ 1.56
NUP50-208ENST00000430547 SLIT3O75094 1523 aa24.79■■□□□ 1.56
NUP50-208ENST00000430547 TTC21AQ8NDW8 1320 aa24.79■■□□□ 1.56
NUP50-208ENST00000430547 SLC24A1O60721 1099 aa24.78■■□□□ 1.56
NUP50-208ENST00000430547 TTC21BQ7Z4L5 1316 aa24.78■■□□□ 1.56
NUP50-208ENST00000430547 ST20-MTHFSA0A0A6YYL1 179 aa24.77■■□□□ 1.56
NUP50-208ENST00000430547 ZBTB7CA1YPR0 619 aa24.77■■□□□ 1.56
NUP50-208ENST00000430547 KRT27Q7Z3Y8 459 aa24.77■■□□□ 1.56
NUP50-208ENST00000430547 TIMELESSQ9UNS1 1208 aa24.77■■□□□ 1.56
NUP50-208ENST00000430547 CCDC125Q86Z20 511 aa24.76■■□□□ 1.55
NUP50-208ENST00000430547 CAMTA1Q9Y6Y1 1673 aa24.75■■□□□ 1.55
NUP50-208ENST00000430547 HDGFL2Q7Z4V5 671 aaPredicted RBP24.75■■□□□ 1.55
NUP50-208ENST00000430547 SPATA31A1Q5TZJ5 1347 aa24.74■■□□□ 1.55
NUP50-208ENST00000430547 THSD7AQ9UPZ6 1657 aa24.74■■□□□ 1.55
NUP50-208ENST00000430547 USP47Q96K76 1375 aa24.73■■□□□ 1.55
NUP50-208ENST00000430547 PUS7Q96PZ0 661 aaKnown RBP24.73■■□□□ 1.55
NUP50-208ENST00000430547 KCNH5Q8NCM2 988 aa24.72■■□□□ 1.55
NUP50-208ENST00000430547 TERF2IPQ9NYB0 399 aa24.72■■□□□ 1.55
NUP50-208ENST00000430547 CD163L1Q9NR16 1453 aa24.71■■□□□ 1.55
NUP50-208ENST00000430547 TESK2Q96S53 571 aa24.71■■□□□ 1.55
NUP50-208ENST00000430547 USP35Q9P2H5 1018 aa24.71■■□□□ 1.55
NUP50-208ENST00000430547 BLMP54132 1417 aaPredicted RBP24.7■■□□□ 1.55
NUP50-208ENST00000430547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.7■■□□□ 1.54
NUP50-208ENST00000430547 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
NUP50-208ENST00000430547 SLC12A5Q9H2X9 1139 aa24.7■■□□□ 1.54
NUP50-208ENST00000430547 COL5A2P05997 1499 aaPredicted RBP24.7■■□□□ 1.54
NUP50-208ENST00000430547 NINLQ9Y2I6 1382 aa24.69■■□□□ 1.54
NUP50-208ENST00000430547 SOX12O15370 315 aa24.69■■□□□ 1.54
NUP50-208ENST00000430547 SF3B2Q13435 895 aaKnown RBP24.69■■□□□ 1.54
NUP50-208ENST00000430547 USP54Q70EL1 1684 aa24.69■■□□□ 1.54
NUP50-208ENST00000430547 AATKQ6ZMQ8 1374 aa24.68■■□□□ 1.54
NUP50-208ENST00000430547 LARP1Q6PKG0 1096 aaKnown RBP24.68■■□□□ 1.54
NUP50-208ENST00000430547 EDC4Q6P2E9 1401 aaKnown RBP24.68■■□□□ 1.54
NUP50-208ENST00000430547 COL18A1P39060 1754 aa24.67■■□□□ 1.54
NUP50-208ENST00000430547 RGPD5Q99666 1765 aa24.67■■□□□ 1.54
NUP50-208ENST00000430547 A0A1W2PP64 1363 aa24.67■■□□□ 1.54
NUP50-208ENST00000430547 TMF1P82094 1093 aa24.66■■□□□ 1.54
NUP50-208ENST00000430547 CRB1P82279 1406 aa24.64■■□□□ 1.54
NUP50-208ENST00000430547 BARGINQ6ZT62 677 aa24.64■■□□□ 1.54
NUP50-208ENST00000430547 TCP11L2Q8N4U5 519 aa24.64■■□□□ 1.54
NUP50-208ENST00000430547 NFAT5O94916 1531 aa24.64■■□□□ 1.53
NUP50-208ENST00000430547 LTN1O94822 1766 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms