RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 DUOX2Q9NRD8 1548 aa10.15□□□□□ -0.78
HPS4-205ENST00000429411 FRMPD1Q5SYB0 1578 aa10.15□□□□□ -0.78
HPS4-205ENST00000429411 VGFO15240 615 aaPredicted RBP10.15□□□□□ -0.78
HPS4-205ENST00000429411 HDGFL2Q7Z4V5 671 aaPredicted RBP10.15□□□□□ -0.78
HPS4-205ENST00000429411 CFAP74Q9C0B2 1584 aa10.15□□□□□ -0.79
HPS4-205ENST00000429411 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.79
HPS4-205ENST00000429411 ANKRD45Q5TZF3 282 aa10.15□□□□□ -0.79
HPS4-205ENST00000429411 ARID3AQ99856 593 aa10.15□□□□□ -0.79
HPS4-205ENST00000429411 NOB1Q9ULX3 412 aaKnown RBP10.15□□□□□ -0.79
HPS4-205ENST00000429411 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 ARHGEF40Q8TER5 1519 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
HPS4-205ENST00000429411 PRAM1Q96QH2 718 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 SLC52A1Q9NWF4 448 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 TERF2IPQ9NYB0 399 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 RTEL1-TNFRSF6BF6WH68 1400 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 ARHGEF5Q12774 1597 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 ABCA6Q8N139 1617 aa10.14□□□□□ -0.79
HPS4-205ENST00000429411 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
HPS4-205ENST00000429411 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
HPS4-205ENST00000429411 XPCQ01831 940 aaPredicted RBP10.13□□□□□ -0.79
HPS4-205ENST00000429411 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
HPS4-205ENST00000429411 ZBTB7CA1YPR0 619 aa10.13□□□□□ -0.79
HPS4-205ENST00000429411 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
HPS4-205ENST00000429411 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
HPS4-205ENST00000429411 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
HPS4-205ENST00000429411 IPO8O15397 1037 aaKnown RBP10.12□□□□□ -0.79
HPS4-205ENST00000429411 AAMPQ13685 434 aa10.12□□□□□ -0.79
HPS4-205ENST00000429411 MVPQ14764 893 aaKnown RBP10.12□□□□□ -0.79
HPS4-205ENST00000429411 ZNF521Q96K83 1311 aa10.12□□□□□ -0.79
HPS4-205ENST00000429411 PRKAR2BP31323 418 aa10.11□□□□□ -0.79
HPS4-205ENST00000429411 TMEM57Q8N5G2 664 aa10.11□□□□□ -0.79
HPS4-205ENST00000429411 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
HPS4-205ENST00000429411 NPATQ14207 1427 aa10.11□□□□□ -0.79
HPS4-205ENST00000429411 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
HPS4-205ENST00000429411 LMTK3Q96Q04 1460 aa10.11□□□□□ -0.79
HPS4-205ENST00000429411 KIDINS220Q9ULH0 1771 aa10.11□□□□□ -0.79
HPS4-205ENST00000429411 TMPOP42166 694 aaKnown RBP10.1□□□□□ -0.79
HPS4-205ENST00000429411 RBM10P98175 930 aaKnown RBP10.1□□□□□ -0.79
HPS4-205ENST00000429411 RICTORQ6R327 1708 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 DDX19BQ9UMR2 479 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 TRIM27P14373 513 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 KCNA6P17658 529 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 WDR63Q8IWG1 891 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
HPS4-205ENST00000429411 EIF2AK4Q9P2K8 1649 aaKnown RBP10.1□□□□□ -0.79
HPS4-205ENST00000429411 PRDM15P57071 1507 aaPredicted RBP10.1□□□□□ -0.79
HPS4-205ENST00000429411 PIK3C2GO75747 1445 aa10.09□□□□□ -0.79
HPS4-205ENST00000429411 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
HPS4-205ENST00000429411 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
HPS4-205ENST00000429411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
HPS4-205ENST00000429411 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
HPS4-205ENST00000429411 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
HPS4-205ENST00000429411 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
HPS4-205ENST00000429411 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
HPS4-205ENST00000429411 GOLGA6L3A6NEY3 463 aa10.09□□□□□ -0.79
HPS4-205ENST00000429411 ATF7IPQ6VMQ6 1270 aa10.09□□□□□ -0.79
HPS4-205ENST00000429411 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
HPS4-205ENST00000429411 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
HPS4-205ENST00000429411 ATF3P18847 181 aa10.08□□□□□ -0.8
HPS4-205ENST00000429411 FOXD4L5Q5VV16 416 aaPredicted RBP10.08□□□□□ -0.8
HPS4-205ENST00000429411 FOXD4L4Q8WXT5 416 aaPredicted RBP10.08□□□□□ -0.8
HPS4-205ENST00000429411 DDX17Q92841 729 aaKnown RBP10.08□□□□□ -0.8
HPS4-205ENST00000429411 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
HPS4-205ENST00000429411 DCTN1Q14203 1278 aa10.07□□□□□ -0.8
HPS4-205ENST00000429411 SLC4A10Q6U841 1118 aa10.07□□□□□ -0.8
HPS4-205ENST00000429411 TRIM44Q96DX7 344 aaPredicted RBP10.07□□□□□ -0.8
HPS4-205ENST00000429411 CDK19Q9BWU1 502 aa10.07□□□□□ -0.8
HPS4-205ENST00000429411 NOL8Q76FK4 1167 aaKnown RBP10.06□□□□□ -0.8
HPS4-205ENST00000429411 RRS1Q15050 365 aaKnown RBP10.06□□□□□ -0.8
HPS4-205ENST00000429411 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
HPS4-205ENST00000429411 TRMT2AQ8IZ69 625 aaKnown RBP10.06□□□□□ -0.8
HPS4-205ENST00000429411 PNNQ9H307 717 aaKnown RBP10.06□□□□□ -0.8
HPS4-205ENST00000429411 CCDC9Q9Y3X0 531 aaKnown RBP10.06□□□□□ -0.8
HPS4-205ENST00000429411 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.05□□□□□ -0.8
HPS4-205ENST00000429411 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
HPS4-205ENST00000429411 TOM1O60784 492 aa10.05□□□□□ -0.8
HPS4-205ENST00000429411 POLR3AO14802 1390 aaPredicted RBP10.05□□□□□ -0.8
HPS4-205ENST00000429411 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 GLIPR1L2Q4G1C9 344 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 CHMP5Q9NZZ3 219 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 FYB1O15117 783 aa10.04□□□□□ -0.8
HPS4-205ENST00000429411 FOXD4L6Q3SYB3 417 aaPredicted RBP10.04□□□□□ -0.8
HPS4-205ENST00000429411 FOXD4L3Q6VB84 417 aaPredicted RBP10.04□□□□□ -0.8
HPS4-205ENST00000429411 ANP32BQ92688 251 aaKnown RBP10.04□□□□□ -0.8
HPS4-205ENST00000429411 TRAK2O60296 914 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 CLTCQ00610 1675 aaKnown RBP10.03□□□□□ -0.8
HPS4-205ENST00000429411 A0A0G2JS52 829 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 ESCO1Q5FWF5 840 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 ZRANB1Q9UGI0 708 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 KIF16BQ96L93 1317 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 SIGLEC1Q9BZZ2 1709 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 NUTM2GQ5VZR2 741 aa10.03□□□□□ -0.8
HPS4-205ENST00000429411 PTPRTO14522 1441 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms