RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 SYNMO15061 1565 aa18.85■□□□□ 0.61
CACTIN-203ENST00000429344 PANK2Q9BZ23 570 aa18.85■□□□□ 0.61
CACTIN-203ENST00000429344 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
CACTIN-203ENST00000429344 PKNOX2Q96KN3 472 aa18.85■□□□□ 0.61
CACTIN-203ENST00000429344 HMOX1P09601 288 aa18.85■□□□□ 0.61
CACTIN-203ENST00000429344 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
CACTIN-203ENST00000429344 NCKAP5LQ9HCH0 1330 aa18.84■□□□□ 0.61
CACTIN-203ENST00000429344 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
CACTIN-203ENST00000429344 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
CACTIN-203ENST00000429344 CAMSAP1Q5T5Y3 1602 aa18.84■□□□□ 0.61
CACTIN-203ENST00000429344 L1TD1Q5T7N2 865 aaKnown RBP18.84■□□□□ 0.61
CACTIN-203ENST00000429344 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
CACTIN-203ENST00000429344 FYB1O15117 783 aa18.83■□□□□ 0.61
CACTIN-203ENST00000429344 UBE2Q2Q8WVN8 375 aa18.83■□□□□ 0.61
CACTIN-203ENST00000429344 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.6
CACTIN-203ENST00000429344 TNRQ92752 1358 aa18.82■□□□□ 0.6
CACTIN-203ENST00000429344 TRMT2AQ8IZ69 625 aaKnown RBP18.82■□□□□ 0.6
CACTIN-203ENST00000429344 RRAGDQ9NQL2 400 aaPredicted RBP18.82■□□□□ 0.6
CACTIN-203ENST00000429344 COG3Q96JB2 828 aa18.82■□□□□ 0.6
CACTIN-203ENST00000429344 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
CACTIN-203ENST00000429344 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
CACTIN-203ENST00000429344 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
CACTIN-203ENST00000429344 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
CACTIN-203ENST00000429344 VSIG10Q8N0Z9 540 aa18.81■□□□□ 0.6
CACTIN-203ENST00000429344 NME9Q86XW9 330 aa18.8■□□□□ 0.6
CACTIN-203ENST00000429344 HSCBQ8IWL3 235 aa18.8■□□□□ 0.6
CACTIN-203ENST00000429344 RIPK4P57078 832 aa18.8■□□□□ 0.6
CACTIN-203ENST00000429344 WASLO00401 505 aaPredicted RBP18.79■□□□□ 0.6
CACTIN-203ENST00000429344 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
CACTIN-203ENST00000429344 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
CACTIN-203ENST00000429344 ZKSCAN2Q63HK3 967 aa18.79■□□□□ 0.6
CACTIN-203ENST00000429344 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
CACTIN-203ENST00000429344 RSPH6AQ9H0K4 717 aa18.79■□□□□ 0.6
CACTIN-203ENST00000429344 DIP2BQ9P265 1576 aa18.79■□□□□ 0.6
CACTIN-203ENST00000429344 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
CACTIN-203ENST00000429344 TBC1D32Q96NH3 1257 aa18.79■□□□□ 0.6
CACTIN-203ENST00000429344 POLR3AO14802 1390 aaPredicted RBP18.78■□□□□ 0.6
CACTIN-203ENST00000429344 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
CACTIN-203ENST00000429344 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
CACTIN-203ENST00000429344 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
CACTIN-203ENST00000429344 CCDC61Q9Y6R9 512 aa18.77■□□□□ 0.6
CACTIN-203ENST00000429344 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
CACTIN-203ENST00000429344 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
CACTIN-203ENST00000429344 NGEFQ8N5V2 710 aa18.77■□□□□ 0.6
CACTIN-203ENST00000429344 NRXN1Q9ULB1 1477 aa18.76■□□□□ 0.59
CACTIN-203ENST00000429344 MCM4P33991 863 aa18.76■□□□□ 0.59
CACTIN-203ENST00000429344 TRAK2O60296 914 aa18.76■□□□□ 0.59
CACTIN-203ENST00000429344 XRCC6P12956 609 aaKnown RBP eCLIP18.76■□□□□ 0.59
CACTIN-203ENST00000429344 PRKAR2BP31323 418 aa18.75■□□□□ 0.59
CACTIN-203ENST00000429344 EMILIN1Q9Y6C2 1016 aa18.75■□□□□ 0.59
CACTIN-203ENST00000429344 GLI2P10070 1586 aa18.75■□□□□ 0.59
CACTIN-203ENST00000429344 RICTORQ6R327 1708 aa18.74■□□□□ 0.59
CACTIN-203ENST00000429344 NEXMIFQ5QGS0 1516 aa18.74■□□□□ 0.59
CACTIN-203ENST00000429344 INSRP06213 1382 aa18.74■□□□□ 0.59
CACTIN-203ENST00000429344 MVPQ14764 893 aaKnown RBP18.74■□□□□ 0.59
CACTIN-203ENST00000429344 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
CACTIN-203ENST00000429344 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
CACTIN-203ENST00000429344 METP08581 1390 aa18.72■□□□□ 0.59
CACTIN-203ENST00000429344 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
CACTIN-203ENST00000429344 LMOD2Q6P5Q4 547 aa18.72■□□□□ 0.59
CACTIN-203ENST00000429344 RBM33Q96EV2 1170 aaKnown RBP18.72■□□□□ 0.59
CACTIN-203ENST00000429344 NUTM2GQ5VZR2 741 aa18.72■□□□□ 0.59
CACTIN-203ENST00000429344 TRIM44Q96DX7 344 aaPredicted RBP18.72■□□□□ 0.59
CACTIN-203ENST00000429344 CHMP5Q9NZZ3 219 aa18.72■□□□□ 0.59
CACTIN-203ENST00000429344 NSD2O96028 1365 aa18.71■□□□□ 0.59
CACTIN-203ENST00000429344 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
CACTIN-203ENST00000429344 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
CACTIN-203ENST00000429344 THEMISQ8N1K5 641 aaPredicted RBP18.71■□□□□ 0.59
CACTIN-203ENST00000429344 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
CACTIN-203ENST00000429344 SETBP1Q9Y6X0 1596 aa18.71■□□□□ 0.59
CACTIN-203ENST00000429344 PIK3C2BO00750 1634 aa18.71■□□□□ 0.58
CACTIN-203ENST00000429344 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
CACTIN-203ENST00000429344 LTKP29376 864 aa18.7■□□□□ 0.58
CACTIN-203ENST00000429344 SSH1Q8WYL5 1049 aa18.7■□□□□ 0.58
CACTIN-203ENST00000429344 AMOTL2Q9Y2J4 779 aa18.7■□□□□ 0.58
CACTIN-203ENST00000429344 QRICH2Q9H0J4 1663 aa18.7■□□□□ 0.58
CACTIN-203ENST00000429344 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
CACTIN-203ENST00000429344 ANTXR1Q9H6X2 564 aa18.7■□□□□ 0.58
CACTIN-203ENST00000429344 A2ML1A8K2U0 1454 aa18.69■□□□□ 0.58
CACTIN-203ENST00000429344 APBB1O00213 710 aa18.69■□□□□ 0.58
CACTIN-203ENST00000429344 TRIM27P14373 513 aa18.69■□□□□ 0.58
CACTIN-203ENST00000429344 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
CACTIN-203ENST00000429344 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
CACTIN-203ENST00000429344 ZFYVE9O95405 1425 aa18.68■□□□□ 0.58
CACTIN-203ENST00000429344 ANKRD45Q5TZF3 282 aa18.68■□□□□ 0.58
CACTIN-203ENST00000429344 TMEM57Q8N5G2 664 aa18.68■□□□□ 0.58
CACTIN-203ENST00000429344 WDR63Q8IWG1 891 aa18.68■□□□□ 0.58
CACTIN-203ENST00000429344 PPLO60437 1756 aa18.68■□□□□ 0.58
CACTIN-203ENST00000429344 PPIP5K1Q6PFW1 1433 aa18.67■□□□□ 0.58
CACTIN-203ENST00000429344 TULP4Q9NRJ4 1543 aa18.67■□□□□ 0.58
CACTIN-203ENST00000429344 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
CACTIN-203ENST00000429344 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
CACTIN-203ENST00000429344 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
CACTIN-203ENST00000429344 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
CACTIN-203ENST00000429344 CLTCQ00610 1675 aaKnown RBP18.66■□□□□ 0.58
CACTIN-203ENST00000429344 TMEM2Q9UHN6 1383 aa18.65■□□□□ 0.58
CACTIN-203ENST00000429344 AMPHP49418 695 aa18.64■□□□□ 0.58
CACTIN-203ENST00000429344 PREX1Q8TCU6 1659 aa18.64■□□□□ 0.57
CACTIN-203ENST00000429344 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.57
CACTIN-203ENST00000429344 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms