RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 ATRNO75882 1429 aa16.36■□□□□ 0.21
RCC1-208ENST00000429051 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
RCC1-208ENST00000429051 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
RCC1-208ENST00000429051 CABP2Q9NPB3 220 aa16.36■□□□□ 0.21
RCC1-208ENST00000429051 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
RCC1-208ENST00000429051 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
RCC1-208ENST00000429051 SLIT2O94813 1529 aa16.35■□□□□ 0.21
RCC1-208ENST00000429051 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
RCC1-208ENST00000429051 SBNO2Q9Y2G9 1366 aa16.35■□□□□ 0.21
RCC1-208ENST00000429051 CRYBG1Q9Y4K1 1723 aa16.34■□□□□ 0.21
RCC1-208ENST00000429051 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
RCC1-208ENST00000429051 BRD4O60885 1362 aaPredicted RBP16.34■□□□□ 0.21
RCC1-208ENST00000429051 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
RCC1-208ENST00000429051 RGS12O14924 1447 aa16.33■□□□□ 0.2
RCC1-208ENST00000429051 COL14A1Q05707 1796 aaKnown RBP16.32■□□□□ 0.2
RCC1-208ENST00000429051 PHRF1Q9P1Y6 1649 aaKnown RBP16.32■□□□□ 0.2
RCC1-208ENST00000429051 ATAD2Q6PL18 1390 aa16.31■□□□□ 0.2
RCC1-208ENST00000429051 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
RCC1-208ENST00000429051 GJD4Q96KN9 370 aaPredicted RBP16.3■□□□□ 0.2
RCC1-208ENST00000429051 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
RCC1-208ENST00000429051 ABTB2Q8N961 1025 aa16.29■□□□□ 0.2
RCC1-208ENST00000429051 USP6P35125 1406 aa16.28■□□□□ 0.2
RCC1-208ENST00000429051 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
RCC1-208ENST00000429051 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
RCC1-208ENST00000429051 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
RCC1-208ENST00000429051 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
RCC1-208ENST00000429051 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.2
RCC1-208ENST00000429051 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
RCC1-208ENST00000429051 VPS72Q15906 364 aa16.26■□□□□ 0.19
RCC1-208ENST00000429051 NUTM2GQ5VZR2 741 aa16.26■□□□□ 0.19
RCC1-208ENST00000429051 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
RCC1-208ENST00000429051 GLI3P10071 1580 aa16.26■□□□□ 0.19
RCC1-208ENST00000429051 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
RCC1-208ENST00000429051 CCDC9Q9Y3X0 531 aaKnown RBP16.25■□□□□ 0.19
RCC1-208ENST00000429051 NRKQ7Z2Y5 1582 aa16.25■□□□□ 0.19
RCC1-208ENST00000429051 KIAA0232Q92628 1395 aa16.24■□□□□ 0.19
RCC1-208ENST00000429051 USP19O94966 1318 aa16.23■□□□□ 0.19
RCC1-208ENST00000429051 UPF1Q92900 1129 aaKnown RBP eCLIP16.23■□□□□ 0.19
RCC1-208ENST00000429051 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
RCC1-208ENST00000429051 PIK3C2AO00443 1686 aa16.22■□□□□ 0.19
RCC1-208ENST00000429051 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
RCC1-208ENST00000429051 PUS7Q96PZ0 661 aaKnown RBP16.22■□□□□ 0.19
RCC1-208ENST00000429051 KTN1Q86UP2 1357 aaKnown RBP16.22■□□□□ 0.19
RCC1-208ENST00000429051 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
RCC1-208ENST00000429051 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
RCC1-208ENST00000429051 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
RCC1-208ENST00000429051 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
RCC1-208ENST00000429051 NLRP6P59044 892 aa16.21■□□□□ 0.19
RCC1-208ENST00000429051 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
RCC1-208ENST00000429051 CPDO75976 1380 aa16.21■□□□□ 0.19
RCC1-208ENST00000429051 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
RCC1-208ENST00000429051 USP47Q96K76 1375 aa16.2■□□□□ 0.18
RCC1-208ENST00000429051 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
RCC1-208ENST00000429051 SLIT3O75094 1523 aa16.19■□□□□ 0.18
RCC1-208ENST00000429051 NINLQ9Y2I6 1382 aa16.19■□□□□ 0.18
RCC1-208ENST00000429051 GCP02774 474 aa16.19■□□□□ 0.18
RCC1-208ENST00000429051 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
RCC1-208ENST00000429051 HDGFL2Q7Z4V5 671 aaPredicted RBP16.19■□□□□ 0.18
RCC1-208ENST00000429051 TESK2Q96S53 571 aa16.18■□□□□ 0.18
RCC1-208ENST00000429051 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
RCC1-208ENST00000429051 EP400Q96L91 3159 aa16.18■□□□□ 0.18
RCC1-208ENST00000429051 BRWD3Q6RI45 1802 aa16.17■□□□□ 0.18
RCC1-208ENST00000429051 A0A0G2JS52 829 aa16.17■□□□□ 0.18
RCC1-208ENST00000429051 ONECUT3O60422 494 aaPredicted RBP16.17■□□□□ 0.18
RCC1-208ENST00000429051 MYT1Q01538 1121 aa16.17■□□□□ 0.18
RCC1-208ENST00000429051 SEPT12Q8IYM1 358 aa16.17■□□□□ 0.18
RCC1-208ENST00000429051 LMO7Q8WWI1 1683 aa16.17■□□□□ 0.18
RCC1-208ENST00000429051 EVA1CP58658 441 aa16.16■□□□□ 0.18
RCC1-208ENST00000429051 TMF1P82094 1093 aa16.16■□□□□ 0.18
RCC1-208ENST00000429051 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
RCC1-208ENST00000429051 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
RCC1-208ENST00000429051 SPATA31A5Q5VU36 1347 aa16.16■□□□□ 0.18
RCC1-208ENST00000429051 SPATA31A7Q8IWB4 1347 aa16.16■□□□□ 0.18
RCC1-208ENST00000429051 CD163L1Q9NR16 1453 aa16.15■□□□□ 0.18
RCC1-208ENST00000429051 EDC4Q6P2E9 1401 aaKnown RBP16.14■□□□□ 0.17
RCC1-208ENST00000429051 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
RCC1-208ENST00000429051 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
RCC1-208ENST00000429051 SLC12A5Q9H2X9 1139 aa16.14■□□□□ 0.17
RCC1-208ENST00000429051 USP54Q70EL1 1684 aa16.14■□□□□ 0.17
RCC1-208ENST00000429051 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.17
RCC1-208ENST00000429051 CCDC125Q86Z20 511 aa16.13■□□□□ 0.17
RCC1-208ENST00000429051 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
RCC1-208ENST00000429051 A0A1W2PP64 1363 aa16.13■□□□□ 0.17
RCC1-208ENST00000429051 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
RCC1-208ENST00000429051 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
RCC1-208ENST00000429051 KRT27Q7Z3Y8 459 aa16.12■□□□□ 0.17
RCC1-208ENST00000429051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
RCC1-208ENST00000429051 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
RCC1-208ENST00000429051 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
RCC1-208ENST00000429051 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
RCC1-208ENST00000429051 NFAT5O94916 1531 aa16.09■□□□□ 0.17
RCC1-208ENST00000429051 ABCC6O95255 1503 aa16.09■□□□□ 0.17
RCC1-208ENST00000429051 COL18A1P39060 1754 aa16.08■□□□□ 0.17
RCC1-208ENST00000429051 SOX12O15370 315 aa16.08■□□□□ 0.16
RCC1-208ENST00000429051 LARP1Q6PKG0 1096 aaKnown RBP16.08■□□□□ 0.16
RCC1-208ENST00000429051 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
RCC1-208ENST00000429051 USP35Q9P2H5 1018 aa16.08■□□□□ 0.16
RCC1-208ENST00000429051 THRAP3Q9Y2W1 955 aaKnown RBP16.08■□□□□ 0.16
RCC1-208ENST00000429051 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
RCC1-208ENST00000429051 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms