RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 TBC1D2Q9BYX2 928 aa21.46■■□□□ 1.03
PCDH8P1-201ENST00000428983 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
PCDH8P1-201ENST00000428983 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
PCDH8P1-201ENST00000428983 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
PCDH8P1-201ENST00000428983 PTPRMP28827 1452 aa21.44■■□□□ 1.02
PCDH8P1-201ENST00000428983 ARHGAP31Q2M1Z3 1444 aa21.44■■□□□ 1.02
PCDH8P1-201ENST00000428983 NUTM2FA1L443 756 aa21.44■■□□□ 1.02
PCDH8P1-201ENST00000428983 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
PCDH8P1-201ENST00000428983 PANK2Q9BZ23 570 aa21.43■■□□□ 1.02
PCDH8P1-201ENST00000428983 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
PCDH8P1-201ENST00000428983 HMOX1P09601 288 aa21.43■■□□□ 1.02
PCDH8P1-201ENST00000428983 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
PCDH8P1-201ENST00000428983 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
PCDH8P1-201ENST00000428983 XRCC6P12956 609 aaKnown RBP eCLIP21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 TERF2IPQ9NYB0 399 aa21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 TMEM131LA2VDJ0 1609 aa21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 PREX1Q8TCU6 1659 aa21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
PCDH8P1-201ENST00000428983 ABCC11Q96J66 1382 aa21.41■■□□□ 1.02
PCDH8P1-201ENST00000428983 WDR63Q8IWG1 891 aa21.41■■□□□ 1.02
PCDH8P1-201ENST00000428983 CD163L1Q9NR16 1453 aa21.4■■□□□ 1.02
PCDH8P1-201ENST00000428983 RIPK4P57078 832 aa21.4■■□□□ 1.02
PCDH8P1-201ENST00000428983 TBC1D32Q96NH3 1257 aa21.4■■□□□ 1.02
PCDH8P1-201ENST00000428983 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
PCDH8P1-201ENST00000428983 L1TD1Q5T7N2 865 aaKnown RBP21.39■■□□□ 1.01
PCDH8P1-201ENST00000428983 HDGFL2Q7Z4V5 671 aaPredicted RBP21.39■■□□□ 1.01
PCDH8P1-201ENST00000428983 EMILIN1Q9Y6C2 1016 aa21.38■■□□□ 1.01
PCDH8P1-201ENST00000428983 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
PCDH8P1-201ENST00000428983 DIAPH1O60610 1272 aaKnown RBP21.37■■□□□ 1.01
PCDH8P1-201ENST00000428983 NME9Q86XW9 330 aa21.36■■□□□ 1.01
PCDH8P1-201ENST00000428983 UPF2Q9HAU5 1272 aaKnown RBP21.36■■□□□ 1.01
PCDH8P1-201ENST00000428983 ALKQ9UM73 1620 aa21.36■■□□□ 1.01
PCDH8P1-201ENST00000428983 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
PCDH8P1-201ENST00000428983 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
PCDH8P1-201ENST00000428983 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
PCDH8P1-201ENST00000428983 ELL2O00472 640 aaPredicted RBP21.35■■□□□ 1.01
PCDH8P1-201ENST00000428983 PHACTR3Q96KR7 559 aa21.35■■□□□ 1.01
PCDH8P1-201ENST00000428983 GOLGA6L3A6NEY3 463 aa21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 FTSJ3Q8IY81 847 aaKnown RBP21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 ATAD2Q6PL18 1390 aa21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 PRKAR2BP31323 418 aa21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 RRS1Q15050 365 aaKnown RBP21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 POLKQ9UBT6 870 aa21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
PCDH8P1-201ENST00000428983 MCM4P33991 863 aa21.33■■□□□ 1.01
PCDH8P1-201ENST00000428983 CCDC27Q2M243 656 aa21.33■■□□□ 1
PCDH8P1-201ENST00000428983 METP08581 1390 aa21.32■■□□□ 1
PCDH8P1-201ENST00000428983 NSD2O96028 1365 aa21.32■■□□□ 1
PCDH8P1-201ENST00000428983 SOX12O15370 315 aa21.32■■□□□ 1
PCDH8P1-201ENST00000428983 PMFBP1Q8TBY8 1022 aa21.32■■□□□ 1
PCDH8P1-201ENST00000428983 NAP1L5Q96NT1 182 aaPredicted RBP21.32■■□□□ 1
PCDH8P1-201ENST00000428983 TRIM27P14373 513 aa21.31■■□□□ 1
PCDH8P1-201ENST00000428983 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
PCDH8P1-201ENST00000428983 ITPRIPQ8IWB1 547 aa21.31■■□□□ 1
PCDH8P1-201ENST00000428983 CLTCQ00610 1675 aaKnown RBP21.31■■□□□ 1
PCDH8P1-201ENST00000428983 RIMS2Q9UQ26 1411 aa21.3■■□□□ 1
PCDH8P1-201ENST00000428983 FSD2A1L4K1 749 aa21.3■■□□□ 1
PCDH8P1-201ENST00000428983 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
PCDH8P1-201ENST00000428983 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
PCDH8P1-201ENST00000428983 USP32Q8NFA0 1604 aa21.3■■□□□ 1
PCDH8P1-201ENST00000428983 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
PCDH8P1-201ENST00000428983 MFAP1P55081 439 aaKnown RBP21.3■■□□□ 1
PCDH8P1-201ENST00000428983 ESF1Q9H501 851 aaKnown RBP21.3■■□□□ 1
PCDH8P1-201ENST00000428983 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
PCDH8P1-201ENST00000428983 ZKSCAN2Q63HK3 967 aa21.29■■□□□ 1
PCDH8P1-201ENST00000428983 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
PCDH8P1-201ENST00000428983 A2ML1A8K2U0 1454 aa21.29■■□□□ 1
PCDH8P1-201ENST00000428983 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
PCDH8P1-201ENST00000428983 MVPQ14764 893 aaKnown RBP21.28■■□□□ 1
PCDH8P1-201ENST00000428983 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
PCDH8P1-201ENST00000428983 TRAK2O60296 914 aa21.27■■□□□ 1
PCDH8P1-201ENST00000428983 DIP2BQ9P265 1576 aa21.27■■□□□ 1
PCDH8P1-201ENST00000428983 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
PCDH8P1-201ENST00000428983 DCTN1Q14203 1278 aa21.26■□□□□ 0.99
PCDH8P1-201ENST00000428983 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
PCDH8P1-201ENST00000428983 TMEM57Q8N5G2 664 aa21.25■□□□□ 0.99
PCDH8P1-201ENST00000428983 C22orf23Q9BZE7 217 aa21.25■□□□□ 0.99
PCDH8P1-201ENST00000428983 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
PCDH8P1-201ENST00000428983 WASLO00401 505 aaPredicted RBP21.25■□□□□ 0.99
PCDH8P1-201ENST00000428983 TSPYL6Q8N831 410 aa21.25■□□□□ 0.99
PCDH8P1-201ENST00000428983 RWDD1Q9H446 243 aaPredicted RBP21.25■□□□□ 0.99
PCDH8P1-201ENST00000428983 NUDT16Q96DE0 195 aaKnown RBP21.24■□□□□ 0.99
PCDH8P1-201ENST00000428983 ZMYM3Q14202 1370 aa21.22■□□□□ 0.99
PCDH8P1-201ENST00000428983 PPIP5K1Q6PFW1 1433 aa21.22■□□□□ 0.99
PCDH8P1-201ENST00000428983 SLC26A8Q96RN1 970 aa21.21■□□□□ 0.99
PCDH8P1-201ENST00000428983 C1orf115Q9H7X2 142 aa21.21■□□□□ 0.99
PCDH8P1-201ENST00000428983 CHMP5Q9NZZ3 219 aa21.21■□□□□ 0.99
PCDH8P1-201ENST00000428983 CLCN1P35523 988 aa21.21■□□□□ 0.99
PCDH8P1-201ENST00000428983 ATF7IPQ6VMQ6 1270 aa21.21■□□□□ 0.99
PCDH8P1-201ENST00000428983 ADGRB2O60241 1585 aa21.2■□□□□ 0.99
PCDH8P1-201ENST00000428983 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
PCDH8P1-201ENST00000428983 FCHSD2O94868 740 aa21.18■□□□□ 0.98
PCDH8P1-201ENST00000428983 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
PCDH8P1-201ENST00000428983 ERBB4Q15303 1308 aa21.18■□□□□ 0.98
PCDH8P1-201ENST00000428983 AEBP1Q8IUX7 1158 aa21.18■□□□□ 0.98
PCDH8P1-201ENST00000428983 LRRC7Q96NW7 1537 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms