RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
ABCA8-202ENST00000428549 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
ABCA8-202ENST00000428549 KDM5AP29375 1690 aaKnown RBP11.73□□□□□ -0.53
ABCA8-202ENST00000428549 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
ABCA8-202ENST00000428549 PPLO60437 1756 aa11.72□□□□□ -0.53
ABCA8-202ENST00000428549 HDGFP51858 240 aaKnown RBP11.72□□□□□ -0.53
ABCA8-202ENST00000428549 SPTY2D1Q68D10 685 aaPredicted RBP11.72□□□□□ -0.53
ABCA8-202ENST00000428549 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
ABCA8-202ENST00000428549 LAMC1P11047 1609 aa11.72□□□□□ -0.53
ABCA8-202ENST00000428549 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.53
ABCA8-202ENST00000428549 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
ABCA8-202ENST00000428549 TMEM2Q9UHN6 1383 aa11.71□□□□□ -0.53
ABCA8-202ENST00000428549 NRXN1Q9ULB1 1477 aa11.71□□□□□ -0.53
ABCA8-202ENST00000428549 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
ABCA8-202ENST00000428549 TRAK2O60296 914 aa11.71□□□□□ -0.54
ABCA8-202ENST00000428549 DSG3P32926 999 aa11.71□□□□□ -0.54
ABCA8-202ENST00000428549 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
ABCA8-202ENST00000428549 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
ABCA8-202ENST00000428549 MYCNP04198 464 aaPredicted RBP11.7□□□□□ -0.54
ABCA8-202ENST00000428549 SLIT1O75093 1534 aa11.7□□□□□ -0.54
ABCA8-202ENST00000428549 ZFYVE9O95405 1425 aa11.7□□□□□ -0.54
ABCA8-202ENST00000428549 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
ABCA8-202ENST00000428549 LTKP29376 864 aa11.69□□□□□ -0.54
ABCA8-202ENST00000428549 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.69□□□□□ -0.54
ABCA8-202ENST00000428549 IGSF5Q9NSI5 407 aa11.69□□□□□ -0.54
ABCA8-202ENST00000428549 SGSM3Q96HU1 749 aa11.68□□□□□ -0.54
ABCA8-202ENST00000428549 MYO5BQ9ULV0 1848 aa11.68□□□□□ -0.54
ABCA8-202ENST00000428549 SCAF11Q99590 1463 aaKnown RBP11.68□□□□□ -0.54
ABCA8-202ENST00000428549 MARCH6O60337 910 aa11.68□□□□□ -0.54
ABCA8-202ENST00000428549 FAM193AP78312 1265 aa11.68□□□□□ -0.54
ABCA8-202ENST00000428549 EIF4G2P78344 907 aaKnown RBP eCLIP11.68□□□□□ -0.54
ABCA8-202ENST00000428549 MED14O60244 1454 aa11.67□□□□□ -0.54
ABCA8-202ENST00000428549 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
ABCA8-202ENST00000428549 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
ABCA8-202ENST00000428549 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
ABCA8-202ENST00000428549 POLR1AO95602 1720 aaPredicted RBP11.66□□□□□ -0.54
ABCA8-202ENST00000428549 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
ABCA8-202ENST00000428549 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
ABCA8-202ENST00000428549 TPD52L2O43399 206 aaKnown RBP11.66□□□□□ -0.54
ABCA8-202ENST00000428549 PHF14O94880 888 aa11.66□□□□□ -0.54
ABCA8-202ENST00000428549 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
ABCA8-202ENST00000428549 FLIIQ13045 1269 aa11.65□□□□□ -0.54
ABCA8-202ENST00000428549 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
ABCA8-202ENST00000428549 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
ABCA8-202ENST00000428549 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
ABCA8-202ENST00000428549 USP47Q96K76 1375 aa11.65□□□□□ -0.54
ABCA8-202ENST00000428549 CARD11Q9BXL7 1154 aa11.64□□□□□ -0.55
ABCA8-202ENST00000428549 A6NJR5 290 aa11.64□□□□□ -0.55
ABCA8-202ENST00000428549 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
ABCA8-202ENST00000428549 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
ABCA8-202ENST00000428549 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
ABCA8-202ENST00000428549 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
ABCA8-202ENST00000428549 PPME1Q9Y570 386 aa11.64□□□□□ -0.55
ABCA8-202ENST00000428549 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
ABCA8-202ENST00000428549 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
ABCA8-202ENST00000428549 PLEKHG1Q9ULL1 1385 aa11.62□□□□□ -0.55
ABCA8-202ENST00000428549 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
ABCA8-202ENST00000428549 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
ABCA8-202ENST00000428549 UNCXA6NJT0 531 aa11.6□□□□□ -0.55
ABCA8-202ENST00000428549 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
ABCA8-202ENST00000428549 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
ABCA8-202ENST00000428549 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
ABCA8-202ENST00000428549 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
ABCA8-202ENST00000428549 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
ABCA8-202ENST00000428549 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
ABCA8-202ENST00000428549 TERF2IPQ9NYB0 399 aa11.6□□□□□ -0.55
ABCA8-202ENST00000428549 ADGRB1O14514 1584 aa11.59□□□□□ -0.55
ABCA8-202ENST00000428549 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
ABCA8-202ENST00000428549 FOXD4L6Q3SYB3 417 aaPredicted RBP11.59□□□□□ -0.55
ABCA8-202ENST00000428549 FOXD4L3Q6VB84 417 aaPredicted RBP11.59□□□□□ -0.55
ABCA8-202ENST00000428549 PROM2Q8N271 834 aa11.59□□□□□ -0.55
ABCA8-202ENST00000428549 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
ABCA8-202ENST00000428549 EIF3AQ14152 1382 aaKnown RBP11.58□□□□□ -0.56
ABCA8-202ENST00000428549 CFAP70Q5T0N1 1121 aa11.58□□□□□ -0.56
ABCA8-202ENST00000428549 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
ABCA8-202ENST00000428549 RBM27Q9P2N5 1060 aaKnown RBP11.58□□□□□ -0.56
ABCA8-202ENST00000428549 SUGT1Q9Y2Z0 365 aa11.58□□□□□ -0.56
ABCA8-202ENST00000428549 CLGNO14967 610 aa11.57□□□□□ -0.56
ABCA8-202ENST00000428549 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
ABCA8-202ENST00000428549 HS6ST3Q8IZP7 471 aa11.57□□□□□ -0.56
ABCA8-202ENST00000428549 HIRIP3Q9BW71 556 aaPredicted RBP11.57□□□□□ -0.56
ABCA8-202ENST00000428549 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
ABCA8-202ENST00000428549 SETD1AO15047 1707 aaKnown RBP11.56□□□□□ -0.56
ABCA8-202ENST00000428549 ABCB7O75027 752 aa11.56□□□□□ -0.56
ABCA8-202ENST00000428549 KCNA6P17658 529 aa11.56□□□□□ -0.56
ABCA8-202ENST00000428549 SERPINA10Q9UK55 444 aa11.56□□□□□ -0.56
ABCA8-202ENST00000428549 NRXN3Q9Y4C0 1643 aa11.56□□□□□ -0.56
ABCA8-202ENST00000428549 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
ABCA8-202ENST00000428549 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
ABCA8-202ENST00000428549 PATL2C9JE40 543 aaKnown RBP11.55□□□□□ -0.56
ABCA8-202ENST00000428549 NME8Q8N427 588 aa11.55□□□□□ -0.56
ABCA8-202ENST00000428549 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
ABCA8-202ENST00000428549 ERCC3P19447 782 aa11.54□□□□□ -0.56
ABCA8-202ENST00000428549 RALBP1Q15311 655 aa11.54□□□□□ -0.56
ABCA8-202ENST00000428549 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
ABCA8-202ENST00000428549 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
ABCA8-202ENST00000428549 CCDC97Q96F63 343 aaPredicted RBP11.54□□□□□ -0.56
ABCA8-202ENST00000428549 ADAMTS13Q76LX8 1427 aa11.54□□□□□ -0.56
ABCA8-202ENST00000428549 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
ABCA8-202ENST00000428549 CPS1P31327 1500 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms