RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 ARHGAP23Q9P227 1491 aa22.57■■□□□ 1.2
PRDM5-203ENST00000428209 COL3A1P02461 1466 aaPredicted RBP22.56■■□□□ 1.2
PRDM5-203ENST00000428209 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
PRDM5-203ENST00000428209 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
PRDM5-203ENST00000428209 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
PRDM5-203ENST00000428209 C20orf194Q5TEA3 1177 aa22.55■■□□□ 1.2
PRDM5-203ENST00000428209 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
PRDM5-203ENST00000428209 PNPLA6Q8IY17 1366 aa22.54■■□□□ 1.2
PRDM5-203ENST00000428209 CDC42BPGQ6DT37 1551 aa22.53■■□□□ 1.2
PRDM5-203ENST00000428209 TBX22Q9Y458 520 aa22.53■■□□□ 1.2
PRDM5-203ENST00000428209 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
PRDM5-203ENST00000428209 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
PRDM5-203ENST00000428209 FBLN1P23142 703 aa22.53■■□□□ 1.2
PRDM5-203ENST00000428209 NCBP3Q53F19 620 aaKnown RBP22.53■■□□□ 1.2
PRDM5-203ENST00000428209 NME9Q86XW9 330 aa22.53■■□□□ 1.2
PRDM5-203ENST00000428209 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
PRDM5-203ENST00000428209 POLKQ9UBT6 870 aa22.52■■□□□ 1.2
PRDM5-203ENST00000428209 AMOTL2Q9Y2J4 779 aa22.52■■□□□ 1.2
PRDM5-203ENST00000428209 ZNF692Q9BU19 519 aaPredicted RBP22.52■■□□□ 1.2
PRDM5-203ENST00000428209 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.52■■□□□ 1.2
PRDM5-203ENST00000428209 PLEKHF1Q96S99 279 aa22.51■■□□□ 1.19
PRDM5-203ENST00000428209 MAPK8IP3Q9UPT6 1336 aa22.5■■□□□ 1.19
PRDM5-203ENST00000428209 BCAR3O75815 825 aa22.49■■□□□ 1.19
PRDM5-203ENST00000428209 ADGRB2O60241 1585 aa22.49■■□□□ 1.19
PRDM5-203ENST00000428209 NUTM2FA1L443 756 aa22.48■■□□□ 1.19
PRDM5-203ENST00000428209 COG3Q96JB2 828 aa22.48■■□□□ 1.19
PRDM5-203ENST00000428209 ZRANB1Q9UGI0 708 aa22.48■■□□□ 1.19
PRDM5-203ENST00000428209 MON2Q7Z3U7 1717 aa22.48■■□□□ 1.19
PRDM5-203ENST00000428209 PNNQ9H307 717 aaKnown RBP22.47■■□□□ 1.19
PRDM5-203ENST00000428209 MAP2P11137 1827 aaKnown RBP22.47■■□□□ 1.19
PRDM5-203ENST00000428209 ITSN1Q15811 1721 aa22.47■■□□□ 1.19
PRDM5-203ENST00000428209 ADAMTSL3P82987 1691 aa22.47■■□□□ 1.19
PRDM5-203ENST00000428209 AKAP12Q02952 1782 aa22.46■■□□□ 1.19
PRDM5-203ENST00000428209 TMPOP42166 694 aaKnown RBP22.46■■□□□ 1.19
PRDM5-203ENST00000428209 MYH16Q9H6N6 1097 aa22.45■■□□□ 1.18
PRDM5-203ENST00000428209 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
PRDM5-203ENST00000428209 ACEP12821 1306 aa22.44■■□□□ 1.18
PRDM5-203ENST00000428209 PLEKHG3A1L390 1219 aa22.43■■□□□ 1.18
PRDM5-203ENST00000428209 FCHSD2O94868 740 aa22.43■■□□□ 1.18
PRDM5-203ENST00000428209 DIP2AQ14689 1571 aa22.43■■□□□ 1.18
PRDM5-203ENST00000428209 AATKQ6ZMQ8 1374 aa22.43■■□□□ 1.18
PRDM5-203ENST00000428209 PTCH1Q13635 1447 aa22.42■■□□□ 1.18
PRDM5-203ENST00000428209 RIMS1Q86UR5 1692 aaKnown RBP22.42■■□□□ 1.18
PRDM5-203ENST00000428209 CEP170BQ9Y4F5 1589 aaPredicted RBP22.42■■□□□ 1.18
PRDM5-203ENST00000428209 TRIM35Q9UPQ4 493 aa22.41■■□□□ 1.18
PRDM5-203ENST00000428209 RIPK4P57078 832 aa22.4■■□□□ 1.18
PRDM5-203ENST00000428209 TTC21BQ7Z4L5 1316 aa22.4■■□□□ 1.18
PRDM5-203ENST00000428209 TOPAZ1Q8N9V7 1692 aa22.4■■□□□ 1.18
PRDM5-203ENST00000428209 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
PRDM5-203ENST00000428209 NEFMP07197 916 aa22.39■■□□□ 1.17
PRDM5-203ENST00000428209 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
PRDM5-203ENST00000428209 RARSP54136 660 aaKnown RBP22.39■■□□□ 1.17
PRDM5-203ENST00000428209 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
PRDM5-203ENST00000428209 PRKAR2BP31323 418 aa22.38■■□□□ 1.17
PRDM5-203ENST00000428209 CDK12Q9NYV4 1490 aaPredicted RBP22.38■■□□□ 1.17
PRDM5-203ENST00000428209 IL13P35225 146 aa22.37■■□□□ 1.17
PRDM5-203ENST00000428209 HMOX1P09601 288 aa22.36■■□□□ 1.17
PRDM5-203ENST00000428209 PDE3AQ14432 1141 aa22.36■■□□□ 1.17
PRDM5-203ENST00000428209 LRRC7Q96NW7 1537 aa22.36■■□□□ 1.17
PRDM5-203ENST00000428209 USP6P35125 1406 aa22.36■■□□□ 1.17
PRDM5-203ENST00000428209 KCNA6P17658 529 aa22.35■■□□□ 1.17
PRDM5-203ENST00000428209 PMFBP1Q8TBY8 1022 aa22.35■■□□□ 1.17
PRDM5-203ENST00000428209 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
PRDM5-203ENST00000428209 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
PRDM5-203ENST00000428209 ANKLE2Q86XL3 938 aa22.34■■□□□ 1.17
PRDM5-203ENST00000428209 NRKQ7Z2Y5 1582 aa22.34■■□□□ 1.17
PRDM5-203ENST00000428209 PIK3R4Q99570 1358 aa22.34■■□□□ 1.17
PRDM5-203ENST00000428209 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
PRDM5-203ENST00000428209 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
PRDM5-203ENST00000428209 IL16Q14005 1332 aa22.33■■□□□ 1.17
PRDM5-203ENST00000428209 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
PRDM5-203ENST00000428209 NGDNQ8NEJ9 315 aaKnown RBP22.31■■□□□ 1.16
PRDM5-203ENST00000428209 PHACTR3Q96KR7 559 aa22.31■■□□□ 1.16
PRDM5-203ENST00000428209 BCL2L13Q9BXK5 485 aa22.31■■□□□ 1.16
PRDM5-203ENST00000428209 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
PRDM5-203ENST00000428209 CT47B1P0C2W7 299 aaPredicted RBP22.3■■□□□ 1.16
PRDM5-203ENST00000428209 PANK1Q8TE04 598 aa22.3■■□□□ 1.16
PRDM5-203ENST00000428209 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
PRDM5-203ENST00000428209 CENPQQ7L2Z9 268 aaPredicted RBP22.3■■□□□ 1.16
PRDM5-203ENST00000428209 OVOS2A0A0J9YW53 1432 aa22.3■■□□□ 1.16
PRDM5-203ENST00000428209 OVOS2Q6IE36 1432 aa22.3■■□□□ 1.16
PRDM5-203ENST00000428209 NFE2L2Q16236 605 aa22.29■■□□□ 1.16
PRDM5-203ENST00000428209 COG6Q9Y2V7 657 aa22.29■■□□□ 1.16
PRDM5-203ENST00000428209 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
PRDM5-203ENST00000428209 RGPD8O14715 1765 aaPredicted RBP22.28■■□□□ 1.16
PRDM5-203ENST00000428209 TTC21AQ8NDW8 1320 aa22.28■■□□□ 1.16
PRDM5-203ENST00000428209 ZNF142P52746 1687 aaPredicted RBP22.26■■□□□ 1.15
PRDM5-203ENST00000428209 SETD1BQ9UPS6 1966 aaKnown RBP22.26■■□□□ 1.15
PRDM5-203ENST00000428209 SOX12O15370 315 aa22.25■■□□□ 1.15
PRDM5-203ENST00000428209 USP31Q70CQ4 1352 aa22.24■■□□□ 1.15
PRDM5-203ENST00000428209 ANKARQ7Z5J8 1434 aa22.24■■□□□ 1.15
PRDM5-203ENST00000428209 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
PRDM5-203ENST00000428209 MS4A1P11836 297 aa22.24■■□□□ 1.15
PRDM5-203ENST00000428209 EIF4A2Q14240 407 aaKnown RBP22.23■■□□□ 1.15
PRDM5-203ENST00000428209 SKAP1Q86WV1 359 aa22.23■■□□□ 1.15
PRDM5-203ENST00000428209 CLUAP1Q96AJ1 413 aa22.22■■□□□ 1.15
PRDM5-203ENST00000428209 LAS1LQ9Y4W2 734 aaKnown RBP22.22■■□□□ 1.15
PRDM5-203ENST00000428209 NALCNQ8IZF0 1738 aa22.22■■□□□ 1.15
PRDM5-203ENST00000428209 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
PRDM5-203ENST00000428209 SMC4Q9NTJ3 1288 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms