RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 BCL9LQ86UU0 1499 aa10.33□□□□□ -0.76
FARP1-204ENST00000427404 TRPC5Q9UL62 973 aaPredicted RBP10.32□□□□□ -0.76
FARP1-204ENST00000427404 BRD4O60885 1362 aaPredicted RBP10.31□□□□□ -0.76
FARP1-204ENST00000427404 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
FARP1-204ENST00000427404 SRPK2P78362 688 aaKnown RBP10.31□□□□□ -0.76
FARP1-204ENST00000427404 RGS12O14924 1447 aa10.31□□□□□ -0.76
FARP1-204ENST00000427404 PPIP5K1Q6PFW1 1433 aa10.31□□□□□ -0.76
FARP1-204ENST00000427404 ACEP12821 1306 aa10.31□□□□□ -0.76
FARP1-204ENST00000427404 EVC2Q86UK5 1308 aa10.31□□□□□ -0.76
FARP1-204ENST00000427404 CLSPNQ9HAW4 1339 aa10.31□□□□□ -0.76
FARP1-204ENST00000427404 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
FARP1-204ENST00000427404 CARD11Q9BXL7 1154 aa10.3□□□□□ -0.76
FARP1-204ENST00000427404 CABP2Q9NPB3 220 aa10.3□□□□□ -0.76
FARP1-204ENST00000427404 PLCH1Q4KWH8 1693 aa10.3□□□□□ -0.76
FARP1-204ENST00000427404 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
FARP1-204ENST00000427404 CABLES1Q8TDN4 633 aa10.29□□□□□ -0.76
FARP1-204ENST00000427404 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
FARP1-204ENST00000427404 COL14A1Q05707 1796 aaKnown RBP10.29□□□□□ -0.76
FARP1-204ENST00000427404 ATAD2Q6PL18 1390 aa10.28□□□□□ -0.76
FARP1-204ENST00000427404 UNC5CLQ8IV45 518 aa10.28□□□□□ -0.76
FARP1-204ENST00000427404 NRAPQ86VF7 1730 aa10.27□□□□□ -0.76
FARP1-204ENST00000427404 USP6P35125 1406 aa10.27□□□□□ -0.77
FARP1-204ENST00000427404 SSH2Q76I76 1423 aa10.27□□□□□ -0.77
FARP1-204ENST00000427404 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
FARP1-204ENST00000427404 GLI3P10071 1580 aa10.26□□□□□ -0.77
FARP1-204ENST00000427404 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
FARP1-204ENST00000427404 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
FARP1-204ENST00000427404 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
FARP1-204ENST00000427404 USP19O94966 1318 aa10.26□□□□□ -0.77
FARP1-204ENST00000427404 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
FARP1-204ENST00000427404 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
FARP1-204ENST00000427404 FAM83GA6ND36 823 aa10.25□□□□□ -0.77
FARP1-204ENST00000427404 VPS72Q15906 364 aa10.25□□□□□ -0.77
FARP1-204ENST00000427404 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
FARP1-204ENST00000427404 CPSF1Q10570 1443 aaKnown RBP10.24□□□□□ -0.77
FARP1-204ENST00000427404 DCAF8L1A6NGE4 600 aa10.24□□□□□ -0.77
FARP1-204ENST00000427404 PUS7Q96PZ0 661 aaKnown RBP10.24□□□□□ -0.77
FARP1-204ENST00000427404 ZNF692Q9BU19 519 aaPredicted RBP10.24□□□□□ -0.77
FARP1-204ENST00000427404 CPDO75976 1380 aa10.24□□□□□ -0.77
FARP1-204ENST00000427404 SLIT3O75094 1523 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 PIK3C2AO00443 1686 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 ABTB2Q8N961 1025 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.77
FARP1-204ENST00000427404 MON2Q7Z3U7 1717 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 KIAA0232Q92628 1395 aa10.23□□□□□ -0.77
FARP1-204ENST00000427404 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
FARP1-204ENST00000427404 TESK2Q96S53 571 aa10.22□□□□□ -0.77
FARP1-204ENST00000427404 PRDM11Q9NQV5 511 aa10.22□□□□□ -0.77
FARP1-204ENST00000427404 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
FARP1-204ENST00000427404 LMO7Q8WWI1 1683 aa10.22□□□□□ -0.77
FARP1-204ENST00000427404 ONECUT3O60422 494 aaPredicted RBP10.21□□□□□ -0.77
FARP1-204ENST00000427404 NUTM2GQ5VZR2 741 aa10.21□□□□□ -0.77
FARP1-204ENST00000427404 TTC21BQ7Z4L5 1316 aa10.21□□□□□ -0.78
FARP1-204ENST00000427404 TTC21AQ8NDW8 1320 aa10.21□□□□□ -0.78
FARP1-204ENST00000427404 USP47Q96K76 1375 aa10.21□□□□□ -0.78
FARP1-204ENST00000427404 NINLQ9Y2I6 1382 aa10.21□□□□□ -0.78
FARP1-204ENST00000427404 CD163L1Q9NR16 1453 aa10.21□□□□□ -0.78
FARP1-204ENST00000427404 USP54Q70EL1 1684 aa10.21□□□□□ -0.78
FARP1-204ENST00000427404 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
FARP1-204ENST00000427404 GCP02774 474 aa10.2□□□□□ -0.78
FARP1-204ENST00000427404 EP400Q96L91 3159 aa10.19□□□□□ -0.78
FARP1-204ENST00000427404 KTN1Q86UP2 1357 aaKnown RBP10.19□□□□□ -0.78
FARP1-204ENST00000427404 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
FARP1-204ENST00000427404 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
FARP1-204ENST00000427404 HOXD11P31277 338 aaPredicted RBP10.19□□□□□ -0.78
FARP1-204ENST00000427404 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
FARP1-204ENST00000427404 RNF39Q9H2S5 420 aa10.19□□□□□ -0.78
FARP1-204ENST00000427404 BRWD3Q6RI45 1802 aa10.19□□□□□ -0.78
FARP1-204ENST00000427404 THSD7AQ9UPZ6 1657 aa10.18□□□□□ -0.78
FARP1-204ENST00000427404 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
FARP1-204ENST00000427404 USP31Q70CQ4 1352 aa10.18□□□□□ -0.78
FARP1-204ENST00000427404 NLRP6P59044 892 aa10.18□□□□□ -0.78
FARP1-204ENST00000427404 CHRNA2Q15822 529 aa10.18□□□□□ -0.78
FARP1-204ENST00000427404 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
FARP1-204ENST00000427404 CCDC9Q9Y3X0 531 aaKnown RBP10.18□□□□□ -0.78
FARP1-204ENST00000427404 EDC4Q6P2E9 1401 aaKnown RBP10.17□□□□□ -0.78
FARP1-204ENST00000427404 AATKQ6ZMQ8 1374 aa10.17□□□□□ -0.78
FARP1-204ENST00000427404 SPATA31A1Q5TZJ5 1347 aa10.17□□□□□ -0.78
FARP1-204ENST00000427404 HDGFL2Q7Z4V5 671 aaPredicted RBP10.17□□□□□ -0.78
FARP1-204ENST00000427404 NFAT5O94916 1531 aa10.17□□□□□ -0.78
FARP1-204ENST00000427404 ABCC6O95255 1503 aa10.17□□□□□ -0.78
FARP1-204ENST00000427404 COL5A2P05997 1499 aaPredicted RBP10.17□□□□□ -0.78
FARP1-204ENST00000427404 COL18A1P39060 1754 aa10.16□□□□□ -0.78
FARP1-204ENST00000427404 A0A1W2PP64 1363 aa10.16□□□□□ -0.78
FARP1-204ENST00000427404 KCNH5Q8NCM2 988 aa10.16□□□□□ -0.78
FARP1-204ENST00000427404 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
FARP1-204ENST00000427404 TMC1Q8TDI8 760 aa10.16□□□□□ -0.78
FARP1-204ENST00000427404 SLC12A5Q9H2X9 1139 aa10.16□□□□□ -0.78
FARP1-204ENST00000427404 TERF2IPQ9NYB0 399 aa10.16□□□□□ -0.78
FARP1-204ENST00000427404 TMF1P82094 1093 aa10.15□□□□□ -0.78
FARP1-204ENST00000427404 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
FARP1-204ENST00000427404 CCDC125Q86Z20 511 aa10.15□□□□□ -0.78
FARP1-204ENST00000427404 CDCA8Q53HL2 280 aa10.14□□□□□ -0.79
FARP1-204ENST00000427404 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
FARP1-204ENST00000427404 KRT27Q7Z3Y8 459 aa10.14□□□□□ -0.79
FARP1-204ENST00000427404 ARHGEF25Q86VW2 580 aa10.14□□□□□ -0.79
FARP1-204ENST00000427404 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
FARP1-204ENST00000427404 OVOS2A0A0J9YW53 1432 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms