RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MS4A1P11836 297 aa14.94□□□□□ -0.02
UBR4-207ENST00000425413 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
UBR4-207ENST00000425413 EMILIN1Q9Y6C2 1016 aa14.94□□□□□ -0.02
UBR4-207ENST00000425413 RIPK4P57078 832 aa14.94□□□□□ -0.02
UBR4-207ENST00000425413 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
UBR4-207ENST00000425413 WASLO00401 505 aaPredicted RBP14.93□□□□□ -0.02
UBR4-207ENST00000425413 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
UBR4-207ENST00000425413 AGLP35573 1532 aa14.93□□□□□ -0.02
UBR4-207ENST00000425413 IQSEC2Q5JU85 1478 aa14.93□□□□□ -0.02
UBR4-207ENST00000425413 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
UBR4-207ENST00000425413 SLC26A8Q96RN1 970 aa14.93□□□□□ -0.02
UBR4-207ENST00000425413 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
UBR4-207ENST00000425413 PLEKHF1Q96S99 279 aa14.92□□□□□ -0.02
UBR4-207ENST00000425413 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBR4-207ENST00000425413 POLKQ9UBT6 870 aa14.92□□□□□ -0.02
UBR4-207ENST00000425413 SOX12O15370 315 aa14.91□□□□□ -0.02
UBR4-207ENST00000425413 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
UBR4-207ENST00000425413 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
UBR4-207ENST00000425413 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
UBR4-207ENST00000425413 TNRQ92752 1358 aa14.91□□□□□ -0.02
UBR4-207ENST00000425413 PRKAR2BP31323 418 aa14.91□□□□□ -0.02
UBR4-207ENST00000425413 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
UBR4-207ENST00000425413 THUMPD2Q9BTF0 503 aaKnown RBP14.91□□□□□ -0.02
UBR4-207ENST00000425413 SPATA31D1Q6ZQQ2 1576 aa14.9□□□□□ -0.02
UBR4-207ENST00000425413 CCDC27Q2M243 656 aa14.9□□□□□ -0.02
UBR4-207ENST00000425413 NLRP1Q9C000 1473 aa14.9□□□□□ -0.02
UBR4-207ENST00000425413 PPIP5K1Q6PFW1 1433 aa14.89□□□□□ -0.03
UBR4-207ENST00000425413 SMC4Q9NTJ3 1288 aa14.89□□□□□ -0.03
UBR4-207ENST00000425413 LTKP29376 864 aa14.88□□□□□ -0.03
UBR4-207ENST00000425413 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
UBR4-207ENST00000425413 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
UBR4-207ENST00000425413 HDGFP51858 240 aaKnown RBP14.87□□□□□ -0.03
UBR4-207ENST00000425413 FTSJ3Q8IY81 847 aaKnown RBP14.87□□□□□ -0.03
UBR4-207ENST00000425413 PCDHB15Q9Y5E8 787 aa14.87□□□□□ -0.03
UBR4-207ENST00000425413 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
UBR4-207ENST00000425413 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
UBR4-207ENST00000425413 SLC4A3P48751 1232 aa14.86□□□□□ -0.03
UBR4-207ENST00000425413 NEFMP07197 916 aa14.86□□□□□ -0.03
UBR4-207ENST00000425413 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
UBR4-207ENST00000425413 PRR36Q9H6K5 1346 aa14.85□□□□□ -0.03
UBR4-207ENST00000425413 ELL2O00472 640 aaPredicted RBP14.85□□□□□ -0.03
UBR4-207ENST00000425413 SSH1Q8WYL5 1049 aa14.85□□□□□ -0.03
UBR4-207ENST00000425413 COG3Q96JB2 828 aa14.85□□□□□ -0.03
UBR4-207ENST00000425413 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
UBR4-207ENST00000425413 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
UBR4-207ENST00000425413 KIF13AQ9H1H9 1805 aa14.84□□□□□ -0.03
UBR4-207ENST00000425413 FAM161AQ3B820 660 aa14.84□□□□□ -0.03
UBR4-207ENST00000425413 RSPH6AQ9H0K4 717 aa14.84□□□□□ -0.03
UBR4-207ENST00000425413 C8orf34Q49A92 452 aa14.83□□□□□ -0.03
UBR4-207ENST00000425413 ZKSCAN2Q63HK3 967 aa14.83□□□□□ -0.03
UBR4-207ENST00000425413 FCHSD2O94868 740 aa14.83□□□□□ -0.04
UBR4-207ENST00000425413 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
UBR4-207ENST00000425413 ITPRIPQ8IWB1 547 aa14.83□□□□□ -0.04
UBR4-207ENST00000425413 DZIP1LQ8IYY4 767 aaKnown RBP14.82□□□□□ -0.04
UBR4-207ENST00000425413 PMFBP1Q8TBY8 1022 aa14.82□□□□□ -0.04
UBR4-207ENST00000425413 NOB1Q9ULX3 412 aaKnown RBP14.82□□□□□ -0.04
UBR4-207ENST00000425413 TRIM27P14373 513 aa14.82□□□□□ -0.04
UBR4-207ENST00000425413 PNPLA6Q8IY17 1366 aa14.82□□□□□ -0.04
UBR4-207ENST00000425413 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
UBR4-207ENST00000425413 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
UBR4-207ENST00000425413 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
UBR4-207ENST00000425413 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
UBR4-207ENST00000425413 PNNQ9H307 717 aaKnown RBP14.8□□□□□ -0.04
UBR4-207ENST00000425413 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
UBR4-207ENST00000425413 MED14O60244 1454 aa14.8□□□□□ -0.04
UBR4-207ENST00000425413 ATP7BP35670 1465 aa14.8□□□□□ -0.04
UBR4-207ENST00000425413 MVPQ14764 893 aaKnown RBP14.8□□□□□ -0.04
UBR4-207ENST00000425413 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
UBR4-207ENST00000425413 CPS1P31327 1500 aa14.79□□□□□ -0.04
UBR4-207ENST00000425413 IL13P35225 146 aa14.79□□□□□ -0.04
UBR4-207ENST00000425413 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
UBR4-207ENST00000425413 CPSF1Q10570 1443 aaKnown RBP14.79□□□□□ -0.04
UBR4-207ENST00000425413 ACEP12821 1306 aa14.79□□□□□ -0.04
UBR4-207ENST00000425413 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
UBR4-207ENST00000425413 ADGRB2O60241 1585 aa14.78□□□□□ -0.04
UBR4-207ENST00000425413 NFE2L2Q16236 605 aa14.78□□□□□ -0.04
UBR4-207ENST00000425413 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
UBR4-207ENST00000425413 SETD1AO15047 1707 aaKnown RBP14.78□□□□□ -0.04
UBR4-207ENST00000425413 TSPYL6Q8N831 410 aa14.78□□□□□ -0.04
UBR4-207ENST00000425413 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
UBR4-207ENST00000425413 LRRC7Q96NW7 1537 aa14.77□□□□□ -0.04
UBR4-207ENST00000425413 RTL5Q5HYW3 569 aaPredicted RBP14.77□□□□□ -0.05
UBR4-207ENST00000425413 ATF7IPQ6VMQ6 1270 aa14.77□□□□□ -0.05
UBR4-207ENST00000425413 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.05
UBR4-207ENST00000425413 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.05
UBR4-207ENST00000425413 SEC24BO95487 1268 aa14.76□□□□□ -0.05
UBR4-207ENST00000425413 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
UBR4-207ENST00000425413 TTC21BQ7Z4L5 1316 aa14.75□□□□□ -0.05
UBR4-207ENST00000425413 SULT6B1Q6IMI4 303 aa14.75□□□□□ -0.05
UBR4-207ENST00000425413 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
UBR4-207ENST00000425413 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
UBR4-207ENST00000425413 KIF20BQ96Q89 1820 aa14.75□□□□□ -0.05
UBR4-207ENST00000425413 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
UBR4-207ENST00000425413 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
UBR4-207ENST00000425413 FAM135BQ49AJ0 1406 aa14.74□□□□□ -0.05
UBR4-207ENST00000425413 IL16Q14005 1332 aa14.74□□□□□ -0.05
UBR4-207ENST00000425413 HSP90AB2PQ58FF8 381 aa14.74□□□□□ -0.05
UBR4-207ENST00000425413 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
UBR4-207ENST00000425413 ANKRD26Q9UPS8 1709 aa14.74□□□□□ -0.05
UBR4-207ENST00000425413 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms