RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TMPOP42166 694 aaKnown RBP19.24■□□□□ 0.67
C9orf3-204ENST00000424143 CHMP4BQ9H444 224 aaKnown RBP19.24■□□□□ 0.67
C9orf3-204ENST00000424143 KIF16BQ96L93 1317 aa19.24■□□□□ 0.67
C9orf3-204ENST00000424143 ATAD2Q6PL18 1390 aa19.24■□□□□ 0.67
C9orf3-204ENST00000424143 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
C9orf3-204ENST00000424143 CD109Q6YHK3 1445 aa19.24■□□□□ 0.67
C9orf3-204ENST00000424143 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
C9orf3-204ENST00000424143 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
C9orf3-204ENST00000424143 RBM25P49756 843 aaKnown RBP19.22■□□□□ 0.67
C9orf3-204ENST00000424143 SLKQ9H2G2 1235 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-204ENST00000424143 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-204ENST00000424143 EIF5BO60841 1220 aaKnown RBP19.22■□□□□ 0.67
C9orf3-204ENST00000424143 TRIM27P14373 513 aa19.22■□□□□ 0.67
C9orf3-204ENST00000424143 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
C9orf3-204ENST00000424143 PTMSP20962 102 aa19.21■□□□□ 0.67
C9orf3-204ENST00000424143 SMC4Q9NTJ3 1288 aa19.21■□□□□ 0.67
C9orf3-204ENST00000424143 ZBTB40Q9NUA8 1239 aa19.21■□□□□ 0.67
C9orf3-204ENST00000424143 DDX11L8A8MPP1 907 aa19.19■□□□□ 0.66
C9orf3-204ENST00000424143 DDIT3P35638 169 aa19.19■□□□□ 0.66
C9orf3-204ENST00000424143 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
C9orf3-204ENST00000424143 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
C9orf3-204ENST00000424143 SIGLEC1Q9BZZ2 1709 aa19.19■□□□□ 0.66
C9orf3-204ENST00000424143 GOLGA6L3A6NEY3 463 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 TNNT2P45379 298 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-204ENST00000424143 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 PIK3R4Q99570 1358 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 NUCB1Q02818 461 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 TMEM132EQ6IEE7 984 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 BCL2L13Q9BXK5 485 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
C9orf3-204ENST00000424143 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
C9orf3-204ENST00000424143 ARHGAP45Q92619 1136 aa19.17■□□□□ 0.66
C9orf3-204ENST00000424143 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
C9orf3-204ENST00000424143 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
C9orf3-204ENST00000424143 NEO1Q92859 1461 aa19.17■□□□□ 0.66
C9orf3-204ENST00000424143 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
C9orf3-204ENST00000424143 PTPRMP28827 1452 aa19.15■□□□□ 0.66
C9orf3-204ENST00000424143 FCHSD2O94868 740 aa19.14■□□□□ 0.66
C9orf3-204ENST00000424143 PRKCSHP14314 528 aaPredicted RBP19.14■□□□□ 0.66
C9orf3-204ENST00000424143 MRE11P49959 708 aa19.14■□□□□ 0.66
C9orf3-204ENST00000424143 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
C9orf3-204ENST00000424143 XRCC6P12956 609 aaKnown RBP eCLIP19.14■□□□□ 0.65
C9orf3-204ENST00000424143 BMP2KLQ5H9B9 411 aa19.14■□□□□ 0.65
C9orf3-204ENST00000424143 TRAK2O60296 914 aa19.13■□□□□ 0.65
C9orf3-204ENST00000424143 NOB1Q9ULX3 412 aaKnown RBP19.13■□□□□ 0.65
C9orf3-204ENST00000424143 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
C9orf3-204ENST00000424143 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
C9orf3-204ENST00000424143 GCC1Q96CN9 775 aa19.12■□□□□ 0.65
C9orf3-204ENST00000424143 CFAP44Q96MT7 982 aa19.12■□□□□ 0.65
C9orf3-204ENST00000424143 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
C9orf3-204ENST00000424143 CFAP65Q6ZU64 1925 aaKnown RBP19.12■□□□□ 0.65
C9orf3-204ENST00000424143 FYB1O15117 783 aa19.11■□□□□ 0.65
C9orf3-204ENST00000424143 SKOR2Q2VWA4 1001 aaPredicted RBP19.11■□□□□ 0.65
C9orf3-204ENST00000424143 TMEM57Q8N5G2 664 aa19.11■□□□□ 0.65
C9orf3-204ENST00000424143 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
C9orf3-204ENST00000424143 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
C9orf3-204ENST00000424143 PTCH1Q13635 1447 aa19.11■□□□□ 0.65
C9orf3-204ENST00000424143 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
C9orf3-204ENST00000424143 MFAP1P55081 439 aaKnown RBP19.1■□□□□ 0.65
C9orf3-204ENST00000424143 CABP2Q9NPB3 220 aa19.1■□□□□ 0.65
C9orf3-204ENST00000424143 FAM135BQ49AJ0 1406 aa19.1■□□□□ 0.65
C9orf3-204ENST00000424143 CLCN1P35523 988 aa19.09■□□□□ 0.65
C9orf3-204ENST00000424143 RIPK4P57078 832 aa19.09■□□□□ 0.65
C9orf3-204ENST00000424143 CHD1LQ86WJ1 897 aa19.09■□□□□ 0.65
C9orf3-204ENST00000424143 TMEM131LA2VDJ0 1609 aa19.08■□□□□ 0.65
C9orf3-204ENST00000424143 DLC1Q96QB1 1528 aa19.08■□□□□ 0.65
C9orf3-204ENST00000424143 CLEC17AQ6ZS10 378 aa19.08■□□□□ 0.65
C9orf3-204ENST00000424143 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.65
C9orf3-204ENST00000424143 GGT6Q6P531 493 aa19.07■□□□□ 0.64
C9orf3-204ENST00000424143 RRAGDQ9NQL2 400 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-204ENST00000424143 ARHGEF40Q8TER5 1519 aa19.07■□□□□ 0.64
C9orf3-204ENST00000424143 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
C9orf3-204ENST00000424143 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-204ENST00000424143 YTHDC2Q9H6S0 1430 aaKnown RBP19.06■□□□□ 0.64
C9orf3-204ENST00000424143 GBP4Q96PP9 640 aa19.06■□□□□ 0.64
C9orf3-204ENST00000424143 ATP7BP35670 1465 aa19.06■□□□□ 0.64
C9orf3-204ENST00000424143 LRRC7Q96NW7 1537 aa19.04■□□□□ 0.64
C9orf3-204ENST00000424143 ZBTB7BO15156 539 aaPredicted RBP19.04■□□□□ 0.64
C9orf3-204ENST00000424143 NPM1P06748 294 aaKnown RBP eCLIP19.04■□□□□ 0.64
C9orf3-204ENST00000424143 RAB3GAP1Q15042 981 aa19.04■□□□□ 0.64
C9orf3-204ENST00000424143 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.04■□□□□ 0.64
C9orf3-204ENST00000424143 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
C9orf3-204ENST00000424143 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
C9orf3-204ENST00000424143 YEATS2Q9ULM3 1422 aa19.03■□□□□ 0.64
C9orf3-204ENST00000424143 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
C9orf3-204ENST00000424143 IDI1Q13907 227 aa19.03■□□□□ 0.64
C9orf3-204ENST00000424143 UBE2Q2Q8WVN8 375 aa19.03■□□□□ 0.64
C9orf3-204ENST00000424143 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
C9orf3-204ENST00000424143 MRPL50Q8N5N7 158 aaKnown RBP19.02■□□□□ 0.64
C9orf3-204ENST00000424143 ZNF853P0CG23 659 aa19.01■□□□□ 0.63
C9orf3-204ENST00000424143 NFE2L2Q16236 605 aa19.01■□□□□ 0.63
C9orf3-204ENST00000424143 GRPEL1Q9HAV7 217 aa19.01■□□□□ 0.63
C9orf3-204ENST00000424143 ABCC4O15439 1325 aa19.01■□□□□ 0.63
C9orf3-204ENST00000424143 IBTKQ9P2D0 1353 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-204ENST00000424143 VAMP4O75379 141 aa19■□□□□ 0.63
C9orf3-204ENST00000424143 GNAI1P63096 354 aa19■□□□□ 0.63
C9orf3-204ENST00000424143 KIF2CQ99661 725 aa19■□□□□ 0.63
C9orf3-204ENST00000424143 ALKQ9UM73 1620 aa18.99■□□□□ 0.63
C9orf3-204ENST00000424143 AATKQ6ZMQ8 1374 aa18.99■□□□□ 0.63
C9orf3-204ENST00000424143 TNPO1Q92973 898 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms