RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 TMPOP42166 694 aaKnown RBP33.22■■■□□ 2.91
ITGA9-203ENST00000422441 AAMPQ13685 434 aa33.22■■■□□ 2.91
ITGA9-203ENST00000422441 TNNQ9UQP3 1299 aa33.22■■■□□ 2.91
ITGA9-203ENST00000422441 SETD1AO15047 1707 aaKnown RBP33.21■■■□□ 2.91
ITGA9-203ENST00000422441 WAPLQ7Z5K2 1190 aa33.2■■■□□ 2.91
ITGA9-203ENST00000422441 PNPLA6Q8IY17 1366 aa33.2■■■□□ 2.9
ITGA9-203ENST00000422441 TRIM35Q9UPQ4 493 aa33.19■■■□□ 2.9
ITGA9-203ENST00000422441 KIF20BQ96Q89 1820 aa33.19■■■□□ 2.9
ITGA9-203ENST00000422441 MLECQ14165 292 aa33.18■■■□□ 2.9
ITGA9-203ENST00000422441 DIAPH1O60610 1272 aaKnown RBP33.16■■■□□ 2.9
ITGA9-203ENST00000422441 CT47B1P0C2W7 299 aaPredicted RBP33.16■■■□□ 2.9
ITGA9-203ENST00000422441 MAPK8IP3Q9UPT6 1336 aa33.16■■■□□ 2.9
ITGA9-203ENST00000422441 TSR2Q969E8 191 aaKnown RBP33.15■■■□□ 2.9
ITGA9-203ENST00000422441 DEKP35659 375 aaKnown RBP33.13■■■□□ 2.89
ITGA9-203ENST00000422441 PMFBP1Q8TBY8 1022 aa33.13■■■□□ 2.89
ITGA9-203ENST00000422441 PCDHB15Q9Y5E8 787 aa33.13■■■□□ 2.89
ITGA9-203ENST00000422441 ATP7BP35670 1465 aa33.13■■■□□ 2.89
ITGA9-203ENST00000422441 IL16Q14005 1332 aa33.11■■■□□ 2.89
ITGA9-203ENST00000422441 EXOSC9Q06265 439 aaKnown RBP33.1■■■□□ 2.89
ITGA9-203ENST00000422441 RTL5Q5HYW3 569 aaPredicted RBP33.09■■■□□ 2.89
ITGA9-203ENST00000422441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.09■■■□□ 2.89
ITGA9-203ENST00000422441 LAS1LQ9Y4W2 734 aaKnown RBP33.09■■■□□ 2.89
ITGA9-203ENST00000422441 NRXN3Q9Y4C0 1643 aa33.09■■■□□ 2.89
ITGA9-203ENST00000422441 PNNQ9H307 717 aaKnown RBP33.09■■■□□ 2.89
ITGA9-203ENST00000422441 RIPK4P57078 832 aa33.08■■■□□ 2.89
ITGA9-203ENST00000422441 ZKSCAN2Q63HK3 967 aa33.08■■■□□ 2.89
ITGA9-203ENST00000422441 MVPQ14764 893 aaKnown RBP33.06■■■□□ 2.88
ITGA9-203ENST00000422441 CDC42BPGQ6DT37 1551 aa33.06■■■□□ 2.88
ITGA9-203ENST00000422441 POLKQ9UBT6 870 aa33.06■■■□□ 2.88
ITGA9-203ENST00000422441 VIRMAQ69YN4 1812 aaKnown RBP33.05■■■□□ 2.88
ITGA9-203ENST00000422441 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.05■■■□□ 2.88
ITGA9-203ENST00000422441 FCHSD2O94868 740 aa33.04■■■□□ 2.88
ITGA9-203ENST00000422441 METP08581 1390 aa33.04■■■□□ 2.88
ITGA9-203ENST00000422441 FBLN1P23142 703 aa33.03■■■□□ 2.88
ITGA9-203ENST00000422441 DZIP1LQ8IYY4 767 aaKnown RBP33.03■■■□□ 2.88
ITGA9-203ENST00000422441 WASLO00401 505 aaPredicted RBP33.03■■■□□ 2.88
ITGA9-203ENST00000422441 SMC4Q9NTJ3 1288 aa33.03■■■□□ 2.88
ITGA9-203ENST00000422441 ZMYM3Q14202 1370 aa33.03■■■□□ 2.88
ITGA9-203ENST00000422441 PPM1GO15355 546 aaPredicted RBP33.02■■■□□ 2.88
ITGA9-203ENST00000422441 CPSF1Q10570 1443 aaKnown RBP33.02■■■□□ 2.88
ITGA9-203ENST00000422441 SSH1Q8WYL5 1049 aa33.01■■■□□ 2.87
ITGA9-203ENST00000422441 FTSJ3Q8IY81 847 aaKnown RBP33■■■□□ 2.87
ITGA9-203ENST00000422441 LRRC7Q96NW7 1537 aa33■■■□□ 2.87
ITGA9-203ENST00000422441 RWDD1Q9H446 243 aaPredicted RBP32.99■■■□□ 2.87
ITGA9-203ENST00000422441 RSPH6AQ9H0K4 717 aa32.99■■■□□ 2.87
ITGA9-203ENST00000422441 PPIP5K1Q6PFW1 1433 aa32.99■■■□□ 2.87
ITGA9-203ENST00000422441 MAP2P11137 1827 aaKnown RBP32.98■■■□□ 2.87
ITGA9-203ENST00000422441 SLC4A3P48751 1232 aa32.98■■■□□ 2.87
ITGA9-203ENST00000422441 EDC4Q6P2E9 1401 aaKnown RBP32.98■■■□□ 2.87
ITGA9-203ENST00000422441 TXNDC2Q86VQ3 553 aa32.97■■■□□ 2.87
ITGA9-203ENST00000422441 FAM135BQ49AJ0 1406 aa32.97■■■□□ 2.87
ITGA9-203ENST00000422441 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
ITGA9-203ENST00000422441 TRIM27P14373 513 aa32.96■■■□□ 2.87
ITGA9-203ENST00000422441 PDZRN3Q9UPQ7 1066 aa32.96■■■□□ 2.87
ITGA9-203ENST00000422441 NEFMP07197 916 aa32.95■■■□□ 2.87
ITGA9-203ENST00000422441 PRKAR2BP31323 418 aa32.95■■■□□ 2.87
ITGA9-203ENST00000422441 USP35Q9P2H5 1018 aa32.95■■■□□ 2.87
ITGA9-203ENST00000422441 SIRT1Q96EB6 747 aa32.94■■■□□ 2.86
ITGA9-203ENST00000422441 KIF13AQ9H1H9 1805 aa32.94■■■□□ 2.86
ITGA9-203ENST00000422441 USP19O94966 1318 aa32.94■■■□□ 2.86
ITGA9-203ENST00000422441 DAXXQ9UER7 740 aaPredicted RBP32.93■■■□□ 2.86
ITGA9-203ENST00000422441 ATF7IPQ6VMQ6 1270 aa32.93■■■□□ 2.86
ITGA9-203ENST00000422441 NUDT16Q96DE0 195 aaKnown RBP32.93■■■□□ 2.86
ITGA9-203ENST00000422441 KNDC1Q76NI1 1749 aa32.92■■■□□ 2.86
ITGA9-203ENST00000422441 NME9Q86XW9 330 aa32.92■■■□□ 2.86
ITGA9-203ENST00000422441 NOB1Q9ULX3 412 aaKnown RBP32.92■■■□□ 2.86
ITGA9-203ENST00000422441 TECPR2O15040 1411 aa32.91■■■□□ 2.86
ITGA9-203ENST00000422441 HDGFP51858 240 aaKnown RBP32.91■■■□□ 2.86
ITGA9-203ENST00000422441 SEC24BO95487 1268 aa32.9■■■□□ 2.86
ITGA9-203ENST00000422441 EMILIN1Q9Y6C2 1016 aa32.9■■■□□ 2.86
ITGA9-203ENST00000422441 ZRANB1Q9UGI0 708 aa32.89■■■□□ 2.86
ITGA9-203ENST00000422441 PHACTR3Q96KR7 559 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 DDX19BQ9UMR2 479 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 IL13P35225 146 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 BCL11AQ9H165 835 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 CCDC61Q9Y6R9 512 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 NCKAP5LQ9HCH0 1330 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 AATKQ6ZMQ8 1374 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 TNRQ92752 1358 aa32.88■■■□□ 2.85
ITGA9-203ENST00000422441 HMOX1P09601 288 aa32.87■■■□□ 2.85
ITGA9-203ENST00000422441 NFE2L2Q16236 605 aa32.86■■■□□ 2.85
ITGA9-203ENST00000422441 CPS1P31327 1500 aa32.86■■■□□ 2.85
ITGA9-203ENST00000422441 CDK12Q9NYV4 1490 aaPredicted RBP32.86■■■□□ 2.85
ITGA9-203ENST00000422441 ITPRIPQ8IWB1 547 aa32.85■■■□□ 2.85
ITGA9-203ENST00000422441 MON2Q7Z3U7 1717 aa32.85■■■□□ 2.85
ITGA9-203ENST00000422441 ALDH1L2Q3SY69 923 aa32.85■■■□□ 2.85
ITGA9-203ENST00000422441 KIF16BQ96L93 1317 aa32.84■■■□□ 2.85
ITGA9-203ENST00000422441 HDAC1Q13547 482 aaPredicted RBP32.83■■■□□ 2.85
ITGA9-203ENST00000422441 IPO8O15397 1037 aaKnown RBP32.82■■■□□ 2.85
ITGA9-203ENST00000422441 TMEM57Q8N5G2 664 aa32.82■■■□□ 2.85
ITGA9-203ENST00000422441 TMEM2Q9UHN6 1383 aa32.82■■■□□ 2.84
ITGA9-203ENST00000422441 COG3Q96JB2 828 aa32.81■■■□□ 2.84
ITGA9-203ENST00000422441 AKAP12Q02952 1782 aa32.8■■■□□ 2.84
ITGA9-203ENST00000422441 UBR1Q8IWV7 1749 aa32.8■■■□□ 2.84
ITGA9-203ENST00000422441 PRR36Q9H6K5 1346 aa32.78■■■□□ 2.84
ITGA9-203ENST00000422441 ZNF428Q96B54 188 aa32.78■■■□□ 2.84
ITGA9-203ENST00000422441 C3P01024 1663 aa32.78■■■□□ 2.84
ITGA9-203ENST00000422441 BRPF1P55201 1214 aaPredicted RBP32.77■■■□□ 2.84
ITGA9-203ENST00000422441 ZNF692Q9BU19 519 aaPredicted RBP32.77■■■□□ 2.84
ITGA9-203ENST00000422441 ZBTB40Q9NUA8 1239 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms