RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
SSX2IP-202ENST00000422026 TTC21BQ7Z4L5 1316 aa19.39■□□□□ 0.69
SSX2IP-202ENST00000422026 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SSX2IP-202ENST00000422026 MST1RQ04912 1400 aa19.39■□□□□ 0.69
SSX2IP-202ENST00000422026 ESCO1Q5FWF5 840 aa19.38■□□□□ 0.69
SSX2IP-202ENST00000422026 XIRP1Q702N8 1843 aaKnown RBP19.38■□□□□ 0.69
SSX2IP-202ENST00000422026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.38■□□□□ 0.69
SSX2IP-202ENST00000422026 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
SSX2IP-202ENST00000422026 COG3Q96JB2 828 aa19.36■□□□□ 0.69
SSX2IP-202ENST00000422026 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
SSX2IP-202ENST00000422026 INSRP06213 1382 aa19.33■□□□□ 0.69
SSX2IP-202ENST00000422026 CFAP53Q96M91 514 aa19.33■□□□□ 0.68
SSX2IP-202ENST00000422026 OVOS2A0A0J9YW53 1432 aa19.33■□□□□ 0.68
SSX2IP-202ENST00000422026 OVOS2Q6IE36 1432 aa19.33■□□□□ 0.68
SSX2IP-202ENST00000422026 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
SSX2IP-202ENST00000422026 USP31Q70CQ4 1352 aa19.32■□□□□ 0.68
SSX2IP-202ENST00000422026 NME9Q86XW9 330 aa19.32■□□□□ 0.68
SSX2IP-202ENST00000422026 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
SSX2IP-202ENST00000422026 USP54Q70EL1 1684 aa19.31■□□□□ 0.68
SSX2IP-202ENST00000422026 PSME1Q06323 249 aa19.31■□□□□ 0.68
SSX2IP-202ENST00000422026 YTHDC1Q96MU7 727 aaKnown RBP19.31■□□□□ 0.68
SSX2IP-202ENST00000422026 LTBP4Q8N2S1 1624 aa19.3■□□□□ 0.68
SSX2IP-202ENST00000422026 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
SSX2IP-202ENST00000422026 ORAI2Q96SN7 254 aa19.29■□□□□ 0.68
SSX2IP-202ENST00000422026 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
SSX2IP-202ENST00000422026 CENPBP07199 599 aaPredicted RBP19.28■□□□□ 0.68
SSX2IP-202ENST00000422026 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
SSX2IP-202ENST00000422026 NPHP3Q7Z494 1330 aa19.27■□□□□ 0.68
SSX2IP-202ENST00000422026 SMG6Q86US8 1419 aaKnown RBP19.27■□□□□ 0.68
SSX2IP-202ENST00000422026 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
SSX2IP-202ENST00000422026 MTHFSP49914 203 aa19.26■□□□□ 0.67
SSX2IP-202ENST00000422026 SBNO1A3KN83 1393 aa19.24■□□□□ 0.67
SSX2IP-202ENST00000422026 FOXO3O43524 673 aa19.24■□□□□ 0.67
SSX2IP-202ENST00000422026 PAK3O75914 559 aaPredicted RBP19.24■□□□□ 0.67
SSX2IP-202ENST00000422026 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
SSX2IP-202ENST00000422026 SLAIN2Q9P270 581 aa19.24■□□□□ 0.67
SSX2IP-202ENST00000422026 CDK12Q9NYV4 1490 aaPredicted RBP19.23■□□□□ 0.67
SSX2IP-202ENST00000422026 TRPM3Q9HCF6 1732 aaPredicted RBP19.23■□□□□ 0.67
SSX2IP-202ENST00000422026 KRT28Q7Z3Y7 464 aa19.23■□□□□ 0.67
SSX2IP-202ENST00000422026 PNPLA6Q8IY17 1366 aa19.22■□□□□ 0.67
SSX2IP-202ENST00000422026 NLRP6P59044 892 aa19.22■□□□□ 0.67
SSX2IP-202ENST00000422026 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
SSX2IP-202ENST00000422026 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
SSX2IP-202ENST00000422026 KIF24Q5T7B8 1368 aa19.2■□□□□ 0.66
SSX2IP-202ENST00000422026 BLMP54132 1417 aaPredicted RBP19.2■□□□□ 0.66
SSX2IP-202ENST00000422026 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.66
SSX2IP-202ENST00000422026 BRINP3Q76B58 766 aa19.2■□□□□ 0.66
SSX2IP-202ENST00000422026 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
SSX2IP-202ENST00000422026 KCNH5Q8NCM2 988 aa19.19■□□□□ 0.66
SSX2IP-202ENST00000422026 COL3A1P02461 1466 aaPredicted RBP19.19■□□□□ 0.66
SSX2IP-202ENST00000422026 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
SSX2IP-202ENST00000422026 SHPRHQ149N8 1683 aa19.18■□□□□ 0.66
SSX2IP-202ENST00000422026 IQSEC2Q5JU85 1478 aa19.18■□□□□ 0.66
SSX2IP-202ENST00000422026 PXDNQ92626 1479 aa19.18■□□□□ 0.66
SSX2IP-202ENST00000422026 ARHGEF10O15013 1369 aa19.18■□□□□ 0.66
SSX2IP-202ENST00000422026 ALS2Q96Q42 1657 aa19.17■□□□□ 0.66
SSX2IP-202ENST00000422026 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
SSX2IP-202ENST00000422026 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
SSX2IP-202ENST00000422026 SLIT3O75094 1523 aa19.16■□□□□ 0.66
SSX2IP-202ENST00000422026 DIAPH1O60610 1272 aaKnown RBP19.16■□□□□ 0.66
SSX2IP-202ENST00000422026 NHSL1Q5SYE7 1610 aa19.15■□□□□ 0.66
SSX2IP-202ENST00000422026 ADAMTS8Q9UP79 889 aa19.15■□□□□ 0.66
SSX2IP-202ENST00000422026 ZBED9Q6R2W3 1325 aa19.15■□□□□ 0.66
SSX2IP-202ENST00000422026 RTL1A6NKG5 1358 aa19.15■□□□□ 0.66
SSX2IP-202ENST00000422026 PNNQ9H307 717 aaKnown RBP19.14■□□□□ 0.65
SSX2IP-202ENST00000422026 EMILIN1Q9Y6C2 1016 aa19.14■□□□□ 0.65
SSX2IP-202ENST00000422026 USP19O94966 1318 aa19.14■□□□□ 0.65
SSX2IP-202ENST00000422026 FLT4P35916 1363 aa19.14■□□□□ 0.65
SSX2IP-202ENST00000422026 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
SSX2IP-202ENST00000422026 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
SSX2IP-202ENST00000422026 RRS1Q15050 365 aaKnown RBP19.13■□□□□ 0.65
SSX2IP-202ENST00000422026 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
SSX2IP-202ENST00000422026 MED1Q15648 1581 aaPredicted RBP19.12■□□□□ 0.65
SSX2IP-202ENST00000422026 NFAT5O94916 1531 aa19.12■□□□□ 0.65
SSX2IP-202ENST00000422026 SPATA31A3Q5VYP0 1347 aa19.12■□□□□ 0.65
SSX2IP-202ENST00000422026 NGEFQ8N5V2 710 aa19.12■□□□□ 0.65
SSX2IP-202ENST00000422026 MAP3K19Q56UN5 1328 aa19.11■□□□□ 0.65
SSX2IP-202ENST00000422026 NUTM2GQ5VZR2 741 aa19.11■□□□□ 0.65
SSX2IP-202ENST00000422026 LMOD2Q6P5Q4 547 aa19.11■□□□□ 0.65
SSX2IP-202ENST00000422026 PHRF1Q9P1Y6 1649 aaKnown RBP19.11■□□□□ 0.65
SSX2IP-202ENST00000422026 TOM1O60784 492 aa19.1■□□□□ 0.65
SSX2IP-202ENST00000422026 AHDC1Q5TGY3 1603 aaPredicted RBP19.1■□□□□ 0.65
SSX2IP-202ENST00000422026 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
SSX2IP-202ENST00000422026 AMPHP49418 695 aa19.09■□□□□ 0.65
SSX2IP-202ENST00000422026 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
SSX2IP-202ENST00000422026 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
SSX2IP-202ENST00000422026 SOX12O15370 315 aa19.08■□□□□ 0.64
SSX2IP-202ENST00000422026 FBLN1P23142 703 aa19.08■□□□□ 0.64
SSX2IP-202ENST00000422026 PEAK1Q9H792 1746 aa19.08■□□□□ 0.64
SSX2IP-202ENST00000422026 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
SSX2IP-202ENST00000422026 GCP02774 474 aa19.07■□□□□ 0.64
SSX2IP-202ENST00000422026 IL13P35225 146 aa19.07■□□□□ 0.64
SSX2IP-202ENST00000422026 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
SSX2IP-202ENST00000422026 ABCC6O95255 1503 aa19.06■□□□□ 0.64
SSX2IP-202ENST00000422026 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
SSX2IP-202ENST00000422026 LTN1O94822 1766 aa19.06■□□□□ 0.64
SSX2IP-202ENST00000422026 NEFMP07197 916 aa19.05■□□□□ 0.64
SSX2IP-202ENST00000422026 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
SSX2IP-202ENST00000422026 FCHSD2O94868 740 aa19.04■□□□□ 0.64
SSX2IP-202ENST00000422026 HOXC9P31274 260 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms