RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 GLMNQ92990 594 aa8.88□□□□□ -0.99
VPS8-202ENST00000421069 CALR3Q96L12 384 aaKnown RBP8.88□□□□□ -0.99
VPS8-202ENST00000421069 SLC6A16Q9GZN6 736 aa8.88□□□□□ -0.99
VPS8-202ENST00000421069 PRDM9Q9NQV7 894 aa8.88□□□□□ -0.99
VPS8-202ENST00000421069 MAP10Q9P2G4 905 aa8.88□□□□□ -0.99
VPS8-202ENST00000421069 HCSTQ9UBK5 93 aa8.88□□□□□ -0.99
VPS8-202ENST00000421069 CTHP32929 405 aa8.87□□□□□ -0.99
VPS8-202ENST00000421069 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
VPS8-202ENST00000421069 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
VPS8-202ENST00000421069 NR1H3Q13133 447 aa8.85□□□□□ -0.99
VPS8-202ENST00000421069 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
VPS8-202ENST00000421069 SPNS2Q8IVW8 549 aa8.85□□□□□ -0.99
VPS8-202ENST00000421069 RNF166Q96A37 237 aaPredicted RBP8.85□□□□□ -0.99
VPS8-202ENST00000421069 GPSM3Q9Y4H4 160 aa8.85□□□□□ -0.99
VPS8-202ENST00000421069 ZBBXA8MT70 800 aa8.84□□□□□ -0.99
VPS8-202ENST00000421069 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
VPS8-202ENST00000421069 ALG2Q9H553 416 aa8.84□□□□□ -0.99
VPS8-202ENST00000421069 ITGBL1O95965 494 aaPredicted RBP8.83□□□□□ -1
VPS8-202ENST00000421069 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
VPS8-202ENST00000421069 PDXDC2PQ6P474 469 aa8.83□□□□□ -1
VPS8-202ENST00000421069 FBXO45P0C2W1 286 aa8.82□□□□□ -1
VPS8-202ENST00000421069 NBPF14Q5TI25 921 aa8.82□□□□□ -1
VPS8-202ENST00000421069 NKX2-3Q8TAU0 364 aa8.82□□□□□ -1
VPS8-202ENST00000421069 S1PR4O95977 384 aa8.81□□□□□ -1
VPS8-202ENST00000421069 KCNC4Q03721 635 aa8.81□□□□□ -1
VPS8-202ENST00000421069 PTK2Q05397 1052 aa8.81□□□□□ -1
VPS8-202ENST00000421069 SEMA3FQ13275 785 aa8.81□□□□□ -1
VPS8-202ENST00000421069 UNC93B1Q9H1C4 597 aa8.81□□□□□ -1
VPS8-202ENST00000421069 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
VPS8-202ENST00000421069 CCDC24Q8N4L8 307 aa8.8□□□□□ -1
VPS8-202ENST00000421069 ZNF592Q92610 1267 aa8.79□□□□□ -1
VPS8-202ENST00000421069 MCCD1P59942 119 aaPredicted RBP8.78□□□□□ -1
VPS8-202ENST00000421069 FCF1Q9Y324 198 aaKnown RBP8.78□□□□□ -1
VPS8-202ENST00000421069 PPP1R15AO75807 674 aaPredicted RBP8.76□□□□□ -1.01
VPS8-202ENST00000421069 GGCXP38435 758 aa8.76□□□□□ -1.01
VPS8-202ENST00000421069 SH3BP5LQ7L8J4 393 aa8.76□□□□□ -1.01
VPS8-202ENST00000421069 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
VPS8-202ENST00000421069 OCSTAMPQ9BR26 566 aa8.75□□□□□ -1.01
VPS8-202ENST00000421069 ARHGAP9Q9BRR9 750 aa8.75□□□□□ -1.01
VPS8-202ENST00000421069 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
VPS8-202ENST00000421069 UCN2Q96RP3 112 aa8.74□□□□□ -1.01
VPS8-202ENST00000421069 PALM3A6NDB9 673 aaPredicted RBP8.73□□□□□ -1.01
VPS8-202ENST00000421069 CFAP70Q5T0N1 1121 aa8.73□□□□□ -1.01
VPS8-202ENST00000421069 SH3RF1Q7Z6J0 888 aa8.73□□□□□ -1.01
VPS8-202ENST00000421069 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
VPS8-202ENST00000421069 NFATC2IPQ8NCF5 419 aa8.73□□□□□ -1.01
VPS8-202ENST00000421069 ADAM32Q8TC27 787 aa8.73□□□□□ -1.01
VPS8-202ENST00000421069 BAP1Q92560 729 aa8.73□□□□□ -1.01
VPS8-202ENST00000421069 RNF223E7ERA6 249 aa8.72□□□□□ -1.01
VPS8-202ENST00000421069 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
VPS8-202ENST00000421069 ZNF511Q8NB15 262 aa8.72□□□□□ -1.01
VPS8-202ENST00000421069 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
VPS8-202ENST00000421069 PPEF1O14829 653 aaPredicted RBP8.71□□□□□ -1.02
VPS8-202ENST00000421069 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.02
VPS8-202ENST00000421069 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.02
VPS8-202ENST00000421069 ZBTB24O43167 697 aaPredicted RBP8.7□□□□□ -1.02
VPS8-202ENST00000421069 ATP9BO43861 1147 aa8.7□□□□□ -1.02
VPS8-202ENST00000421069 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
VPS8-202ENST00000421069 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.7□□□□□ -1.02
VPS8-202ENST00000421069 PCDHB9Q9Y5E1 797 aa8.7□□□□□ -1.02
VPS8-202ENST00000421069 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
VPS8-202ENST00000421069 LINC01559Q495D7 138 aa8.69□□□□□ -1.02
VPS8-202ENST00000421069 IFFO2Q5TF58 517 aa8.69□□□□□ -1.02
VPS8-202ENST00000421069 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
VPS8-202ENST00000421069 TBC1D9Q6ZT07 1266 aa8.69□□□□□ -1.02
VPS8-202ENST00000421069 MAFBQ9Y5Q3 323 aaPredicted RBP8.69□□□□□ -1.02
VPS8-202ENST00000421069 ACIN1Q9UKV3 1341 aaKnown RBP8.69□□□□□ -1.02
VPS8-202ENST00000421069 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
VPS8-202ENST00000421069 RPIAP49247 311 aa8.68□□□□□ -1.02
VPS8-202ENST00000421069 SH3BP2P78314 561 aa8.68□□□□□ -1.02
VPS8-202ENST00000421069 AGERQ15109 404 aa8.68□□□□□ -1.02
VPS8-202ENST00000421069 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
VPS8-202ENST00000421069 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 RFX1P22670 979 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 WNT7BP56706 349 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 TRIM32Q13049 653 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
VPS8-202ENST00000421069 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 C1QTNF2Q9BXJ5 285 aa8.67□□□□□ -1.02
VPS8-202ENST00000421069 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
VPS8-202ENST00000421069 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
VPS8-202ENST00000421069 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
VPS8-202ENST00000421069 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
VPS8-202ENST00000421069 PIK3CDO00329 1044 aa8.65□□□□□ -1.02
VPS8-202ENST00000421069 LZTS3O60299 673 aaPredicted RBP8.65□□□□□ -1.02
VPS8-202ENST00000421069 SKIP12755 728 aa8.65□□□□□ -1.02
VPS8-202ENST00000421069 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
VPS8-202ENST00000421069 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
VPS8-202ENST00000421069 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
VPS8-202ENST00000421069 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
VPS8-202ENST00000421069 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
VPS8-202ENST00000421069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
VPS8-202ENST00000421069 CD2BP2O95400 341 aaKnown RBP8.64□□□□□ -1.03
VPS8-202ENST00000421069 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
VPS8-202ENST00000421069 PDE4CQ08493 712 aa8.64□□□□□ -1.03
VPS8-202ENST00000421069 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
VPS8-202ENST00000421069 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
VPS8-202ENST00000421069 VARSP26640 1264 aaKnown RBP8.63□□□□□ -1.03
VPS8-202ENST00000421069 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms