RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
CHRD-204ENST00000420973 GZF1Q9H116 711 aaPredicted RBP18.36■□□□□ 0.53
CHRD-204ENST00000420973 E9PSI1 815 aa18.36■□□□□ 0.53
CHRD-204ENST00000420973 VGLL3A8MV65 326 aa18.36■□□□□ 0.53
CHRD-204ENST00000420973 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
CHRD-204ENST00000420973 RIPK4P57078 832 aa18.36■□□□□ 0.53
CHRD-204ENST00000420973 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
CHRD-204ENST00000420973 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
CHRD-204ENST00000420973 DEPDC5O75140 1603 aa18.35■□□□□ 0.53
CHRD-204ENST00000420973 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
CHRD-204ENST00000420973 NUDT16Q96DE0 195 aaKnown RBP18.35■□□□□ 0.53
CHRD-204ENST00000420973 TRIM44Q96DX7 344 aaPredicted RBP18.34■□□□□ 0.53
CHRD-204ENST00000420973 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
CHRD-204ENST00000420973 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
CHRD-204ENST00000420973 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
CHRD-204ENST00000420973 MYOM2P54296 1465 aa18.33■□□□□ 0.53
CHRD-204ENST00000420973 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.53
CHRD-204ENST00000420973 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
CHRD-204ENST00000420973 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
CHRD-204ENST00000420973 NCLP19338 710 aaKnown RBP18.32■□□□□ 0.52
CHRD-204ENST00000420973 LTKP29376 864 aa18.32■□□□□ 0.52
CHRD-204ENST00000420973 CFAP74Q9C0B2 1584 aa18.32■□□□□ 0.52
CHRD-204ENST00000420973 DHX37Q8IY37 1157 aaKnown RBP18.32■□□□□ 0.52
CHRD-204ENST00000420973 SMC4Q9NTJ3 1288 aa18.31■□□□□ 0.52
CHRD-204ENST00000420973 ADGRB3O60242 1522 aa18.31■□□□□ 0.52
CHRD-204ENST00000420973 COG3Q96JB2 828 aa18.31■□□□□ 0.52
CHRD-204ENST00000420973 KDM5AP29375 1690 aaKnown RBP18.3■□□□□ 0.52
CHRD-204ENST00000420973 METP08581 1390 aa18.3■□□□□ 0.52
CHRD-204ENST00000420973 GOLGA6L3A6NEY3 463 aa18.3■□□□□ 0.52
CHRD-204ENST00000420973 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
CHRD-204ENST00000420973 ANP32BQ92688 251 aaKnown RBP18.3■□□□□ 0.52
CHRD-204ENST00000420973 TPM2P07951 284 aa18.29■□□□□ 0.52
CHRD-204ENST00000420973 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
CHRD-204ENST00000420973 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
CHRD-204ENST00000420973 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
CHRD-204ENST00000420973 ANKRD36BQ8N2N9 1353 aa18.29■□□□□ 0.52
CHRD-204ENST00000420973 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.28■□□□□ 0.52
CHRD-204ENST00000420973 PANK2Q9BZ23 570 aa18.28■□□□□ 0.52
CHRD-204ENST00000420973 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
CHRD-204ENST00000420973 SYNMO15061 1565 aa18.27■□□□□ 0.52
CHRD-204ENST00000420973 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
CHRD-204ENST00000420973 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
CHRD-204ENST00000420973 TNRQ92752 1358 aa18.27■□□□□ 0.51
CHRD-204ENST00000420973 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.51
CHRD-204ENST00000420973 IPO4Q8TEX9 1081 aaKnown RBP18.26■□□□□ 0.51
CHRD-204ENST00000420973 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
CHRD-204ENST00000420973 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
CHRD-204ENST00000420973 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
CHRD-204ENST00000420973 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
CHRD-204ENST00000420973 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
CHRD-204ENST00000420973 AMOTL2Q9Y2J4 779 aa18.25■□□□□ 0.51
CHRD-204ENST00000420973 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
CHRD-204ENST00000420973 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
CHRD-204ENST00000420973 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
CHRD-204ENST00000420973 SIGLEC1Q9BZZ2 1709 aa18.25■□□□□ 0.51
CHRD-204ENST00000420973 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
CHRD-204ENST00000420973 LMTK2Q8IWU2 1503 aa18.24■□□□□ 0.51
CHRD-204ENST00000420973 FAM83GA6ND36 823 aa18.24■□□□□ 0.51
CHRD-204ENST00000420973 ESPNB1AK53 854 aa18.24■□□□□ 0.51
CHRD-204ENST00000420973 GLI2P10070 1586 aa18.23■□□□□ 0.51
CHRD-204ENST00000420973 PHACTR3Q96KR7 559 aa18.22■□□□□ 0.51
CHRD-204ENST00000420973 XRCC6P12956 609 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHRD-204ENST00000420973 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
CHRD-204ENST00000420973 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
CHRD-204ENST00000420973 RLBP1P12271 317 aa18.2■□□□□ 0.5
CHRD-204ENST00000420973 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
CHRD-204ENST00000420973 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
CHRD-204ENST00000420973 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
CHRD-204ENST00000420973 SBNO2Q9Y2G9 1366 aa18.2■□□□□ 0.5
CHRD-204ENST00000420973 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
CHRD-204ENST00000420973 LAMC1P11047 1609 aa18.19■□□□□ 0.5
CHRD-204ENST00000420973 ADGRB1O14514 1584 aa18.19■□□□□ 0.5
CHRD-204ENST00000420973 PIK3C2BO00750 1634 aa18.19■□□□□ 0.5
CHRD-204ENST00000420973 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
CHRD-204ENST00000420973 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 AMPHP49418 695 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 RICTORQ6R327 1708 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 ACEP12821 1306 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 MS4A1P11836 297 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 MYO5BQ9ULV0 1848 aa18.18■□□□□ 0.5
CHRD-204ENST00000420973 IGHDP01880 384 aa18.17■□□□□ 0.5
CHRD-204ENST00000420973 NLRP6P59044 892 aa18.17■□□□□ 0.5
CHRD-204ENST00000420973 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
CHRD-204ENST00000420973 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
CHRD-204ENST00000420973 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
CHRD-204ENST00000420973 APBB1O00213 710 aa18.17■□□□□ 0.5
CHRD-204ENST00000420973 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
CHRD-204ENST00000420973 NKTRP30414 1462 aaKnown RBP18.16■□□□□ 0.5
CHRD-204ENST00000420973 A2ML1A8K2U0 1454 aa18.16■□□□□ 0.5
CHRD-204ENST00000420973 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
CHRD-204ENST00000420973 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
CHRD-204ENST00000420973 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
CHRD-204ENST00000420973 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
CHRD-204ENST00000420973 THEMISQ8N1K5 641 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms