RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PLEKHG5O94827 1062 aa30.37■■■□□ 2.45
CPNE1-211ENST00000420363 LMOD2Q6P5Q4 547 aa30.37■■■□□ 2.45
CPNE1-211ENST00000420363 ABCA3Q99758 1704 aa30.36■■■□□ 2.45
CPNE1-211ENST00000420363 EVC2Q86UK5 1308 aa30.35■■■□□ 2.45
CPNE1-211ENST00000420363 SRPK2P78362 688 aaKnown RBP30.34■■■□□ 2.45
CPNE1-211ENST00000420363 NGDNQ8NEJ9 315 aaKnown RBP30.34■■■□□ 2.45
CPNE1-211ENST00000420363 PLEKHG3A1L390 1219 aa30.33■■■□□ 2.45
CPNE1-211ENST00000420363 CABLES1Q8TDN4 633 aa30.33■■■□□ 2.45
CPNE1-211ENST00000420363 PPIP5K1Q6PFW1 1433 aa30.32■■■□□ 2.44
CPNE1-211ENST00000420363 CCER1Q8TC90 406 aaPredicted RBP30.32■■■□□ 2.44
CPNE1-211ENST00000420363 CCDC125Q86Z20 511 aa30.31■■■□□ 2.44
CPNE1-211ENST00000420363 SLIT2O94813 1529 aa30.31■■■□□ 2.44
CPNE1-211ENST00000420363 CABP2Q9NPB3 220 aa30.29■■■□□ 2.44
CPNE1-211ENST00000420363 CRYBG1Q9Y4K1 1723 aa30.27■■■□□ 2.44
CPNE1-211ENST00000420363 ACEP12821 1306 aa30.26■■■□□ 2.44
CPNE1-211ENST00000420363 BRD4O60885 1362 aaPredicted RBP30.25■■■□□ 2.43
CPNE1-211ENST00000420363 CCDC9Q9Y3X0 531 aaKnown RBP30.24■■■□□ 2.43
CPNE1-211ENST00000420363 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.24■■■□□ 2.43
CPNE1-211ENST00000420363 VPS72Q15906 364 aa30.23■■■□□ 2.43
CPNE1-211ENST00000420363 ZRANB1Q9UGI0 708 aa30.23■■■□□ 2.43
CPNE1-211ENST00000420363 EP400Q96L91 3159 aa30.21■■■□□ 2.43
CPNE1-211ENST00000420363 AKAP12Q02952 1782 aa30.2■■■□□ 2.43
CPNE1-211ENST00000420363 SEPT12Q8IYM1 358 aa30.2■■■□□ 2.43
CPNE1-211ENST00000420363 USP47Q96K76 1375 aa30.19■■■□□ 2.42
CPNE1-211ENST00000420363 FAM83GA6ND36 823 aa30.19■■■□□ 2.42
CPNE1-211ENST00000420363 GLI3P10071 1580 aa30.19■■■□□ 2.42
CPNE1-211ENST00000420363 SLC24A1O60721 1099 aa30.18■■■□□ 2.42
CPNE1-211ENST00000420363 USP6P35125 1406 aa30.18■■■□□ 2.42
CPNE1-211ENST00000420363 PHRF1Q9P1Y6 1649 aaKnown RBP30.18■■■□□ 2.42
CPNE1-211ENST00000420363 CABP1Q9NZU7 370 aa30.17■■■□□ 2.42
CPNE1-211ENST00000420363 NWD2Q9ULI1 1742 aa30.16■■■□□ 2.42
CPNE1-211ENST00000420363 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
CPNE1-211ENST00000420363 PUS7Q96PZ0 661 aaKnown RBP30.15■■■□□ 2.42
CPNE1-211ENST00000420363 TESK2Q96S53 571 aa30.15■■■□□ 2.42
CPNE1-211ENST00000420363 PLCH1Q4KWH8 1693 aa30.14■■■□□ 2.42
CPNE1-211ENST00000420363 ST20-MTHFSA0A0A6YYL1 179 aa30.14■■■□□ 2.42
CPNE1-211ENST00000420363 NRKQ7Z2Y5 1582 aa30.14■■■□□ 2.42
CPNE1-211ENST00000420363 ONECUT3O60422 494 aaPredicted RBP30.13■■■□□ 2.41
CPNE1-211ENST00000420363 MON2Q7Z3U7 1717 aa30.13■■■□□ 2.41
CPNE1-211ENST00000420363 SSH2Q76I76 1423 aa30.13■■■□□ 2.41
CPNE1-211ENST00000420363 SF3B2Q13435 895 aaKnown RBP30.12■■■□□ 2.41
CPNE1-211ENST00000420363 CPSF1Q10570 1443 aaKnown RBP30.12■■■□□ 2.41
CPNE1-211ENST00000420363 BTG4Q9NY30 223 aa30.11■■■□□ 2.41
CPNE1-211ENST00000420363 BLMP54132 1417 aaPredicted RBP30.11■■■□□ 2.41
CPNE1-211ENST00000420363 A0A0G2JS52 829 aa30.1■■■□□ 2.41
CPNE1-211ENST00000420363 MYT1Q01538 1121 aa30.1■■■□□ 2.41
CPNE1-211ENST00000420363 COL14A1Q05707 1796 aaKnown RBP30.1■■■□□ 2.41
CPNE1-211ENST00000420363 KRT27Q7Z3Y8 459 aa30.09■■■□□ 2.41
CPNE1-211ENST00000420363 SRCAPQ6ZRS2 3230 aa30.09■■■□□ 2.41
CPNE1-211ENST00000420363 ZNF692Q9BU19 519 aaPredicted RBP30.08■■■□□ 2.41
CPNE1-211ENST00000420363 PIK3C2AO00443 1686 aa30.07■■■□□ 2.41
CPNE1-211ENST00000420363 NINLQ9Y2I6 1382 aa30.07■■■□□ 2.4
CPNE1-211ENST00000420363 USP19O94966 1318 aa30.06■■■□□ 2.4
CPNE1-211ENST00000420363 CD163L1Q9NR16 1453 aa30.06■■■□□ 2.4
CPNE1-211ENST00000420363 NRAPQ86VF7 1730 aa30.05■■■□□ 2.4
CPNE1-211ENST00000420363 FAM98CQ17RN3 349 aaKnown RBP30.04■■■□□ 2.4
CPNE1-211ENST00000420363 DEFB132Q7Z7B7 95 aa30.04■■■□□ 2.4
CPNE1-211ENST00000420363 ABTB2Q8N961 1025 aa30.04■■■□□ 2.4
CPNE1-211ENST00000420363 BRWD3Q6RI45 1802 aa30.03■■■□□ 2.4
CPNE1-211ENST00000420363 SLIT3O75094 1523 aa30.01■■■□□ 2.4
CPNE1-211ENST00000420363 PRDM11Q9NQV5 511 aa30.01■■■□□ 2.39
CPNE1-211ENST00000420363 KTN1Q86UP2 1357 aaKnown RBP30.01■■■□□ 2.39
CPNE1-211ENST00000420363 USP54Q70EL1 1684 aa30.01■■■□□ 2.39
CPNE1-211ENST00000420363 TTC21AQ8NDW8 1320 aa30■■■□□ 2.39
CPNE1-211ENST00000420363 TMF1P82094 1093 aa29.99■■■□□ 2.39
CPNE1-211ENST00000420363 NLRP13Q86W25 1043 aa29.99■■■□□ 2.39
CPNE1-211ENST00000420363 TTC21BQ7Z4L5 1316 aa29.98■■■□□ 2.39
CPNE1-211ENST00000420363 NUTM2GQ5VZR2 741 aa29.97■■■□□ 2.39
CPNE1-211ENST00000420363 CPDO75976 1380 aa29.96■■■□□ 2.39
CPNE1-211ENST00000420363 EDC4Q6P2E9 1401 aaKnown RBP29.96■■■□□ 2.39
CPNE1-211ENST00000420363 SPATA31A5Q5VU36 1347 aa29.96■■■□□ 2.39
CPNE1-211ENST00000420363 SPATA31A7Q8IWB4 1347 aa29.96■■■□□ 2.39
CPNE1-211ENST00000420363 A0A1W2PP64 1363 aa29.95■■■□□ 2.39
CPNE1-211ENST00000420363 KIAA0232Q92628 1395 aa29.95■■■□□ 2.39
CPNE1-211ENST00000420363 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
CPNE1-211ENST00000420363 HDGFL2Q7Z4V5 671 aaPredicted RBP29.94■■■□□ 2.38
CPNE1-211ENST00000420363 TMC1Q8TDI8 760 aa29.94■■■□□ 2.38
CPNE1-211ENST00000420363 TERF2IPQ9NYB0 399 aa29.94■■■□□ 2.38
CPNE1-211ENST00000420363 LMO7Q8WWI1 1683 aa29.92■■■□□ 2.38
CPNE1-211ENST00000420363 SLC12A5Q9H2X9 1139 aa29.92■■■□□ 2.38
CPNE1-211ENST00000420363 BAG6P46379 1132 aa29.91■■■□□ 2.38
CPNE1-211ENST00000420363 NLRP6P59044 892 aa29.9■■■□□ 2.38
CPNE1-211ENST00000420363 ZC3H6P61129 1189 aaKnown RBP29.9■■■□□ 2.38
CPNE1-211ENST00000420363 CHRNA2Q15822 529 aa29.9■■■□□ 2.38
CPNE1-211ENST00000420363 MYOM1P52179 1685 aa29.9■■■□□ 2.38
CPNE1-211ENST00000420363 GCP02774 474 aa29.89■■■□□ 2.38
CPNE1-211ENST00000420363 STRN4Q9NRL3 753 aa29.89■■■□□ 2.38
CPNE1-211ENST00000420363 USP31Q70CQ4 1352 aa29.89■■■□□ 2.37
CPNE1-211ENST00000420363 ANKRD36BQ8N2N9 1353 aa29.89■■■□□ 2.37
CPNE1-211ENST00000420363 EIF4G2P78344 907 aaKnown RBP eCLIP29.87■■■□□ 2.37
CPNE1-211ENST00000420363 FAM182BQ5T319 152 aa29.87■■■□□ 2.37
CPNE1-211ENST00000420363 NFAT5O94916 1531 aa29.86■■■□□ 2.37
CPNE1-211ENST00000420363 EVA1CP58658 441 aa29.85■■■□□ 2.37
CPNE1-211ENST00000420363 SPATA31A1Q5TZJ5 1347 aa29.84■■■□□ 2.37
CPNE1-211ENST00000420363 ABCC6O95255 1503 aa29.84■■■□□ 2.37
CPNE1-211ENST00000420363 KCNH5Q8NCM2 988 aa29.82■■■□□ 2.36
CPNE1-211ENST00000420363 CAMTA1Q9Y6Y1 1673 aa29.82■■■□□ 2.36
CPNE1-211ENST00000420363 OVOS2A0A0J9YW53 1432 aa29.81■■■□□ 2.36
CPNE1-211ENST00000420363 OVOS2Q6IE36 1432 aa29.81■■■□□ 2.36
CPNE1-211ENST00000420363 EN1Q05925 392 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms