RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
SEMA4D-204ENST00000420101 FYB1O15117 783 aa19.24■□□□□ 0.67
SEMA4D-204ENST00000420101 PRR36Q9H6K5 1346 aa19.24■□□□□ 0.67
SEMA4D-204ENST00000420101 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
SEMA4D-204ENST00000420101 PDE4AP27815 886 aa19.23■□□□□ 0.67
SEMA4D-204ENST00000420101 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
SEMA4D-204ENST00000420101 ADGRB2O60241 1585 aa19.22■□□□□ 0.67
SEMA4D-204ENST00000420101 MTHFSP49914 203 aa19.22■□□□□ 0.67
SEMA4D-204ENST00000420101 PDE3BQ13370 1112 aa19.22■□□□□ 0.67
SEMA4D-204ENST00000420101 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
SEMA4D-204ENST00000420101 GSE1Q14687 1217 aa19.21■□□□□ 0.67
SEMA4D-204ENST00000420101 C14orf37Q86TY3 774 aa19.21■□□□□ 0.67
SEMA4D-204ENST00000420101 XRN1Q8IZH2 1706 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-204ENST00000420101 RBM33Q96EV2 1170 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-204ENST00000420101 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
SEMA4D-204ENST00000420101 EDC4Q6P2E9 1401 aaKnown RBP19.19■□□□□ 0.66
SEMA4D-204ENST00000420101 INSRP06213 1382 aa19.19■□□□□ 0.66
SEMA4D-204ENST00000420101 KDM4FA0A1W2PPD8 638 aa19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 RRP1P56182 461 aaKnown RBP19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 ACEP12821 1306 aa19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 CDC42BPGQ6DT37 1551 aa19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 HSPA2P54652 639 aa19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 PMFBP1Q8TBY8 1022 aa19.18■□□□□ 0.66
SEMA4D-204ENST00000420101 NGDNQ8NEJ9 315 aaKnown RBP19.17■□□□□ 0.66
SEMA4D-204ENST00000420101 PLEKHG3A1L390 1219 aa19.16■□□□□ 0.66
SEMA4D-204ENST00000420101 NME9Q86XW9 330 aa19.16■□□□□ 0.66
SEMA4D-204ENST00000420101 RSPH6AQ9H0K4 717 aa19.16■□□□□ 0.66
SEMA4D-204ENST00000420101 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
SEMA4D-204ENST00000420101 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
SEMA4D-204ENST00000420101 COG3Q96JB2 828 aa19.15■□□□□ 0.66
SEMA4D-204ENST00000420101 CHD2O14647 1828 aaKnown RBP19.14■□□□□ 0.65
SEMA4D-204ENST00000420101 PROSER2Q86WR7 435 aaPredicted RBP19.13■□□□□ 0.65
SEMA4D-204ENST00000420101 ITSN1Q15811 1721 aa19.12■□□□□ 0.65
SEMA4D-204ENST00000420101 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
SEMA4D-204ENST00000420101 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
SEMA4D-204ENST00000420101 TTC21BQ7Z4L5 1316 aa19.11■□□□□ 0.65
SEMA4D-204ENST00000420101 ANKARQ7Z5J8 1434 aa19.1■□□□□ 0.65
SEMA4D-204ENST00000420101 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
SEMA4D-204ENST00000420101 FAM43AQ8N2R8 423 aa19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 ANKRD26Q9UPS8 1709 aa19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 FBLN1P23142 703 aa19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 TOPAZ1Q8N9V7 1692 aa19.09■□□□□ 0.65
SEMA4D-204ENST00000420101 USP6P35125 1406 aa19.08■□□□□ 0.65
SEMA4D-204ENST00000420101 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.64
SEMA4D-204ENST00000420101 RTN4Q9NQC3 1192 aaKnown RBP19.07■□□□□ 0.64
SEMA4D-204ENST00000420101 ADGRL3Q9HAR2 1447 aa19.07■□□□□ 0.64
SEMA4D-204ENST00000420101 MON2Q7Z3U7 1717 aa19.07■□□□□ 0.64
SEMA4D-204ENST00000420101 AKAP12Q02952 1782 aa19.07■□□□□ 0.64
SEMA4D-204ENST00000420101 APAF1O14727 1248 aa19.07■□□□□ 0.64
SEMA4D-204ENST00000420101 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
SEMA4D-204ENST00000420101 ESCO1Q5FWF5 840 aa19.05■□□□□ 0.64
SEMA4D-204ENST00000420101 POLKQ9UBT6 870 aa19.05■□□□□ 0.64
SEMA4D-204ENST00000420101 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
SEMA4D-204ENST00000420101 NFKBIBQ15653 356 aa19.04■□□□□ 0.64
SEMA4D-204ENST00000420101 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
SEMA4D-204ENST00000420101 NALCNQ8IZF0 1738 aa19.04■□□□□ 0.64
SEMA4D-204ENST00000420101 TTC21AQ8NDW8 1320 aa19.04■□□□□ 0.64
SEMA4D-204ENST00000420101 EXOC6Q8TAG9 804 aa19.04■□□□□ 0.64
SEMA4D-204ENST00000420101 RUNDC1Q96C34 613 aa19.04■□□□□ 0.64
SEMA4D-204ENST00000420101 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
SEMA4D-204ENST00000420101 SOX12O15370 315 aa19.03■□□□□ 0.64
SEMA4D-204ENST00000420101 EMILIN1Q9Y6C2 1016 aa19.03■□□□□ 0.64
SEMA4D-204ENST00000420101 RRS1Q15050 365 aaKnown RBP19.02■□□□□ 0.64
SEMA4D-204ENST00000420101 NWD1Q149M9 1564 aa19.02■□□□□ 0.64
SEMA4D-204ENST00000420101 CDCA7LQ96GN5 454 aa19.02■□□□□ 0.63
SEMA4D-204ENST00000420101 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
SEMA4D-204ENST00000420101 NEUROD2Q15784 382 aa19.01■□□□□ 0.63
SEMA4D-204ENST00000420101 LMTK3Q96Q04 1460 aa19■□□□□ 0.63
SEMA4D-204ENST00000420101 PSME1Q06323 249 aa19■□□□□ 0.63
SEMA4D-204ENST00000420101 SHPRHQ149N8 1683 aa19■□□□□ 0.63
SEMA4D-204ENST00000420101 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
SEMA4D-204ENST00000420101 AATKQ6ZMQ8 1374 aa18.99■□□□□ 0.63
SEMA4D-204ENST00000420101 NLRP6P59044 892 aa18.99■□□□□ 0.63
SEMA4D-204ENST00000420101 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.99■□□□□ 0.63
SEMA4D-204ENST00000420101 ATF3P18847 181 aa18.98■□□□□ 0.63
SEMA4D-204ENST00000420101 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
SEMA4D-204ENST00000420101 NRKQ7Z2Y5 1582 aa18.98■□□□□ 0.63
SEMA4D-204ENST00000420101 GOLGA2Q08379 1002 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 ABTB2Q8N961 1025 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 BRPF3Q9ULD4 1205 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 MAPK8IP3Q9UPT6 1336 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
SEMA4D-204ENST00000420101 ORAI2Q96SN7 254 aa18.96■□□□□ 0.63
SEMA4D-204ENST00000420101 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
SEMA4D-204ENST00000420101 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
SEMA4D-204ENST00000420101 OVOS2A0A0J9YW53 1432 aa18.95■□□□□ 0.62
SEMA4D-204ENST00000420101 OVOS2Q6IE36 1432 aa18.95■□□□□ 0.62
SEMA4D-204ENST00000420101 GLIPR1L2Q4G1C9 344 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms