RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 AEBP1Q8IUX7 1158 aa16.43■□□□□ 0.22
TNFRSF8-203ENST00000417814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF8-203ENST00000417814 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
TNFRSF8-203ENST00000417814 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
TNFRSF8-203ENST00000417814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
TNFRSF8-203ENST00000417814 LMOD2Q6P5Q4 547 aa16.42■□□□□ 0.22
TNFRSF8-203ENST00000417814 PLCH2O75038 1416 aa16.42■□□□□ 0.22
TNFRSF8-203ENST00000417814 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
TNFRSF8-203ENST00000417814 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
TNFRSF8-203ENST00000417814 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
TNFRSF8-203ENST00000417814 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
TNFRSF8-203ENST00000417814 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.22
TNFRSF8-203ENST00000417814 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.22
TNFRSF8-203ENST00000417814 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.22
TNFRSF8-203ENST00000417814 INSRP06213 1382 aa16.39■□□□□ 0.21
TNFRSF8-203ENST00000417814 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
TNFRSF8-203ENST00000417814 ABCA8O94911 1581 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 ATP10AO60312 1499 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 GRPEL1Q9HAV7 217 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 FANCAO15360 1455 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
TNFRSF8-203ENST00000417814 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 PIK3C2GO75747 1445 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 PKP1Q13835 747 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
TNFRSF8-203ENST00000417814 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
TNFRSF8-203ENST00000417814 ANTXR1Q9H6X2 564 aa16.36■□□□□ 0.21
TNFRSF8-203ENST00000417814 GDPD2Q9HCC8 539 aa16.36■□□□□ 0.21
TNFRSF8-203ENST00000417814 FOXO3O43524 673 aa16.36■□□□□ 0.21
TNFRSF8-203ENST00000417814 ZBTB40Q9NUA8 1239 aa16.36■□□□□ 0.21
TNFRSF8-203ENST00000417814 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
TNFRSF8-203ENST00000417814 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
TNFRSF8-203ENST00000417814 COG3Q96JB2 828 aa16.35■□□□□ 0.21
TNFRSF8-203ENST00000417814 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
TNFRSF8-203ENST00000417814 PTMAP06454 111 aaKnown RBP16.35■□□□□ 0.21
TNFRSF8-203ENST00000417814 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF8-203ENST00000417814 PTPRTO14522 1441 aa16.34■□□□□ 0.21
TNFRSF8-203ENST00000417814 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF8-203ENST00000417814 DUOX2Q9NRD8 1548 aa16.34■□□□□ 0.21
TNFRSF8-203ENST00000417814 SLC26A8Q96RN1 970 aa16.34■□□□□ 0.21
TNFRSF8-203ENST00000417814 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
TNFRSF8-203ENST00000417814 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
TNFRSF8-203ENST00000417814 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.21
TNFRSF8-203ENST00000417814 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.21
TNFRSF8-203ENST00000417814 ZGPATQ8N5A5 531 aaKnown RBP16.33■□□□□ 0.2
TNFRSF8-203ENST00000417814 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
TNFRSF8-203ENST00000417814 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
TNFRSF8-203ENST00000417814 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.33■□□□□ 0.2
TNFRSF8-203ENST00000417814 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
TNFRSF8-203ENST00000417814 DNTTIP2Q5QJE6 756 aaKnown RBP16.31■□□□□ 0.2
TNFRSF8-203ENST00000417814 MEIS3Q99687 375 aa16.31■□□□□ 0.2
TNFRSF8-203ENST00000417814 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
TNFRSF8-203ENST00000417814 NEK4P51957 841 aa16.31■□□□□ 0.2
TNFRSF8-203ENST00000417814 VAMP4O75379 141 aa16.3■□□□□ 0.2
TNFRSF8-203ENST00000417814 NUCB1Q02818 461 aa16.3■□□□□ 0.2
TNFRSF8-203ENST00000417814 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
TNFRSF8-203ENST00000417814 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
TNFRSF8-203ENST00000417814 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
TNFRSF8-203ENST00000417814 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF8-203ENST00000417814 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF8-203ENST00000417814 GNAI1P63096 354 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 ANXA1P04083 346 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 MRE11P49959 708 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 ESPNB1AK53 854 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 SMC5Q8IY18 1101 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
TNFRSF8-203ENST00000417814 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF8-203ENST00000417814 FAM69CQ0P6D2 419 aa16.27■□□□□ 0.2
TNFRSF8-203ENST00000417814 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF8-203ENST00000417814 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
TNFRSF8-203ENST00000417814 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
TNFRSF8-203ENST00000417814 CDC45O75419 566 aa16.27■□□□□ 0.19
TNFRSF8-203ENST00000417814 STAC3Q96MF2 364 aa16.27■□□□□ 0.19
TNFRSF8-203ENST00000417814 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.19
TNFRSF8-203ENST00000417814 AMPHP49418 695 aa16.26■□□□□ 0.19
TNFRSF8-203ENST00000417814 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
TNFRSF8-203ENST00000417814 G2E3Q7L622 706 aa16.26■□□□□ 0.19
TNFRSF8-203ENST00000417814 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
TNFRSF8-203ENST00000417814 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
TNFRSF8-203ENST00000417814 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF8-203ENST00000417814 FCHSD2O94868 740 aa16.25■□□□□ 0.19
TNFRSF8-203ENST00000417814 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
TNFRSF8-203ENST00000417814 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
TNFRSF8-203ENST00000417814 CROCC2H7BZ55 1655 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms