RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 PRDM10Q9NQV6 1147 aa11.5□□□□□ -0.57
SP140-204ENST00000417495 MLLT3P42568 568 aaPredicted RBP11.5□□□□□ -0.57
SP140-204ENST00000417495 ANP32BQ92688 251 aaKnown RBP11.5□□□□□ -0.57
SP140-204ENST00000417495 KIF7Q2M1P5 1343 aa11.5□□□□□ -0.57
SP140-204ENST00000417495 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
SP140-204ENST00000417495 MMP14P50281 582 aa11.5□□□□□ -0.57
SP140-204ENST00000417495 MCM6Q14566 821 aa11.49□□□□□ -0.57
SP140-204ENST00000417495 AFAP1Q8N556 730 aa11.49□□□□□ -0.57
SP140-204ENST00000417495 RPGRIP1LQ68CZ1 1315 aa11.49□□□□□ -0.57
SP140-204ENST00000417495 A6NJR5 290 aa11.49□□□□□ -0.57
SP140-204ENST00000417495 ANP32AP39687 249 aaKnown RBP11.49□□□□□ -0.57
SP140-204ENST00000417495 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
SP140-204ENST00000417495 KRI1Q8N9T8 703 aaKnown RBP11.48□□□□□ -0.57
SP140-204ENST00000417495 SBNO2Q9Y2G9 1366 aa11.48□□□□□ -0.57
SP140-204ENST00000417495 MROH2AA6NES4 1674 aa11.48□□□□□ -0.57
SP140-204ENST00000417495 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
SP140-204ENST00000417495 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
SP140-204ENST00000417495 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
SP140-204ENST00000417495 UGGT1Q9NYU2 1555 aa11.47□□□□□ -0.57
SP140-204ENST00000417495 MCCP23508 829 aa11.46□□□□□ -0.57
SP140-204ENST00000417495 UTP14CQ5TAP6 766 aaKnown RBP11.46□□□□□ -0.57
SP140-204ENST00000417495 FAM193AP78312 1265 aa11.46□□□□□ -0.57
SP140-204ENST00000417495 IRX3P78415 501 aaPredicted RBP11.46□□□□□ -0.57
SP140-204ENST00000417495 E2F4Q16254 413 aa11.46□□□□□ -0.57
SP140-204ENST00000417495 FLIIQ13045 1269 aa11.46□□□□□ -0.58
SP140-204ENST00000417495 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
SP140-204ENST00000417495 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
SP140-204ENST00000417495 PLCD4Q9BRC7 762 aa11.45□□□□□ -0.58
SP140-204ENST00000417495 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
SP140-204ENST00000417495 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
SP140-204ENST00000417495 SIGLEC1Q9BZZ2 1709 aa11.44□□□□□ -0.58
SP140-204ENST00000417495 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
SP140-204ENST00000417495 NPATQ14207 1427 aa11.44□□□□□ -0.58
SP140-204ENST00000417495 NPC1L1Q9UHC9 1359 aa11.43□□□□□ -0.58
SP140-204ENST00000417495 AXDND1Q5T1B0 1012 aaPredicted RBP11.43□□□□□ -0.58
SP140-204ENST00000417495 EIF3AQ14152 1382 aaKnown RBP11.43□□□□□ -0.58
SP140-204ENST00000417495 TPM2P07951 284 aa11.42□□□□□ -0.58
SP140-204ENST00000417495 CARD11Q9BXL7 1154 aa11.42□□□□□ -0.58
SP140-204ENST00000417495 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
SP140-204ENST00000417495 PTMSP20962 102 aa11.42□□□□□ -0.58
SP140-204ENST00000417495 DCAF11Q8TEB1 546 aa11.42□□□□□ -0.58
SP140-204ENST00000417495 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
SP140-204ENST00000417495 PPP1R37O75864 691 aa11.42□□□□□ -0.58
SP140-204ENST00000417495 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
SP140-204ENST00000417495 USP32Q8NFA0 1604 aa11.41□□□□□ -0.58
SP140-204ENST00000417495 MAP7D2Q96T17 732 aa11.41□□□□□ -0.58
SP140-204ENST00000417495 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
SP140-204ENST00000417495 CLCN1P35523 988 aa11.41□□□□□ -0.58
SP140-204ENST00000417495 RRAGDQ9NQL2 400 aaPredicted RBP11.41□□□□□ -0.58
SP140-204ENST00000417495 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
SP140-204ENST00000417495 DDRGK1Q96HY6 314 aa11.4□□□□□ -0.58
SP140-204ENST00000417495 NEXMIFQ5QGS0 1516 aa11.4□□□□□ -0.58
SP140-204ENST00000417495 PIK3C2GO75747 1445 aa11.4□□□□□ -0.58
SP140-204ENST00000417495 MYOM1P52179 1685 aa11.4□□□□□ -0.58
SP140-204ENST00000417495 KIF3BO15066 747 aa11.39□□□□□ -0.59
SP140-204ENST00000417495 RALBP1Q15311 655 aa11.39□□□□□ -0.59
SP140-204ENST00000417495 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
SP140-204ENST00000417495 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
SP140-204ENST00000417495 ADGRB1O14514 1584 aa11.39□□□□□ -0.59
SP140-204ENST00000417495 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
SP140-204ENST00000417495 BRD4O60885 1362 aaPredicted RBP11.39□□□□□ -0.59
SP140-204ENST00000417495 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
SP140-204ENST00000417495 TESK2Q96S53 571 aa11.38□□□□□ -0.59
SP140-204ENST00000417495 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
SP140-204ENST00000417495 PHF14O94880 888 aa11.38□□□□□ -0.59
SP140-204ENST00000417495 NUBP1P53384 320 aa11.38□□□□□ -0.59
SP140-204ENST00000417495 TMED8Q6PL24 325 aaPredicted RBP11.38□□□□□ -0.59
SP140-204ENST00000417495 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
SP140-204ENST00000417495 CCDC97Q96F63 343 aaPredicted RBP11.38□□□□□ -0.59
SP140-204ENST00000417495 PARD3Q8TEW0 1356 aa11.37□□□□□ -0.59
SP140-204ENST00000417495 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
SP140-204ENST00000417495 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
SP140-204ENST00000417495 PPP4R3BQ5MIZ7 849 aa11.36□□□□□ -0.59
SP140-204ENST00000417495 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
SP140-204ENST00000417495 PATL2C9JE40 543 aaKnown RBP11.36□□□□□ -0.59
SP140-204ENST00000417495 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
SP140-204ENST00000417495 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
SP140-204ENST00000417495 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
SP140-204ENST00000417495 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
SP140-204ENST00000417495 PSMD1Q99460 953 aa11.35□□□□□ -0.59
SP140-204ENST00000417495 IGSF5Q9NSI5 407 aa11.35□□□□□ -0.59
SP140-204ENST00000417495 FRAT1Q92837 279 aaPredicted RBP11.34□□□□□ -0.59
SP140-204ENST00000417495 ERVK-7P63135 1459 aa11.34□□□□□ -0.59
SP140-204ENST00000417495 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
SP140-204ENST00000417495 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
SP140-204ENST00000417495 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
SP140-204ENST00000417495 TMF1P82094 1093 aa11.34□□□□□ -0.59
SP140-204ENST00000417495 SETQ01105 290 aaPredicted RBP11.34□□□□□ -0.59
SP140-204ENST00000417495 CERS3Q8IU89 383 aa11.34□□□□□ -0.59
SP140-204ENST00000417495 ARHGEF28Q8N1W1 1705 aaKnown RBP11.33□□□□□ -0.59
SP140-204ENST00000417495 DLC1Q96QB1 1528 aa11.33□□□□□ -0.6
SP140-204ENST00000417495 KIF20AO95235 890 aa11.33□□□□□ -0.6
SP140-204ENST00000417495 PSEN1P49768 467 aa11.33□□□□□ -0.6
SP140-204ENST00000417495 DMTNQ08495 405 aa11.33□□□□□ -0.6
SP140-204ENST00000417495 YEATS2Q9ULM3 1422 aa11.32□□□□□ -0.6
SP140-204ENST00000417495 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
SP140-204ENST00000417495 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
SP140-204ENST00000417495 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
SP140-204ENST00000417495 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
SP140-204ENST00000417495 KNDC1Q76NI1 1749 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms