RNA–Protein interactions for RNA: ENST00000416591.5

CAPN10-209, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,514 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-209ENST00000416591 U2AF1Q01081 240 aaKnown RBP eCLIP25.94■■□□□ 1.74
CAPN10-209ENST00000416591 A0A1W2PP64 1363 aa25.94■■□□□ 1.74
CAPN10-209ENST00000416591 SRPK2P78362 688 aaKnown RBP25.93■■□□□ 1.74
CAPN10-209ENST00000416591 PREX1Q8TCU6 1659 aa25.93■■□□□ 1.74
CAPN10-209ENST00000416591 TMEM131LA2VDJ0 1609 aa25.92■■□□□ 1.74
CAPN10-209ENST00000416591 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
CAPN10-209ENST00000416591 PTPRMP28827 1452 aa25.89■■□□□ 1.74
CAPN10-209ENST00000416591 C22orf23Q9BZE7 217 aa25.89■■□□□ 1.73
CAPN10-209ENST00000416591 SMC4Q9NTJ3 1288 aa25.88■■□□□ 1.73
CAPN10-209ENST00000416591 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
CAPN10-209ENST00000416591 RSPH6AQ9H0K4 717 aa25.87■■□□□ 1.73
CAPN10-209ENST00000416591 GGNBP2Q9H3C7 697 aa25.86■■□□□ 1.73
CAPN10-209ENST00000416591 ATAD2Q6PL18 1390 aa25.86■■□□□ 1.73
CAPN10-209ENST00000416591 MINK1Q8N4C8 1332 aaPredicted RBP25.86■■□□□ 1.73
CAPN10-209ENST00000416591 TSR2Q969E8 191 aaKnown RBP25.86■■□□□ 1.73
CAPN10-209ENST00000416591 PRAM1Q96QH2 718 aa25.86■■□□□ 1.73
CAPN10-209ENST00000416591 DDX19BQ9UMR2 479 aa25.86■■□□□ 1.73
CAPN10-209ENST00000416591 MCM4P33991 863 aa25.85■■□□□ 1.73
CAPN10-209ENST00000416591 MFAP1P55081 439 aaKnown RBP25.85■■□□□ 1.73
CAPN10-209ENST00000416591 YTHDC2Q9H6S0 1430 aaKnown RBP25.85■■□□□ 1.73
CAPN10-209ENST00000416591 EXOSC9Q06265 439 aaKnown RBP25.84■■□□□ 1.73
CAPN10-209ENST00000416591 SPRYD3Q8NCJ5 442 aa25.84■■□□□ 1.73
CAPN10-209ENST00000416591 CHMP5Q9NZZ3 219 aa25.84■■□□□ 1.73
CAPN10-209ENST00000416591 TRIM27P14373 513 aa25.84■■□□□ 1.73
CAPN10-209ENST00000416591 TERF2IPQ9NYB0 399 aa25.83■■□□□ 1.73
CAPN10-209ENST00000416591 FBXO31Q5XUX0 539 aaPredicted RBP25.82■■□□□ 1.72
CAPN10-209ENST00000416591 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
CAPN10-209ENST00000416591 ITPRIPQ8IWB1 547 aa25.82■■□□□ 1.72
CAPN10-209ENST00000416591 CLTCQ00610 1675 aaKnown RBP25.82■■□□□ 1.72
CAPN10-209ENST00000416591 ATF7IPQ6VMQ6 1270 aa25.81■■□□□ 1.72
CAPN10-209ENST00000416591 COL3A1P02461 1466 aaPredicted RBP25.81■■□□□ 1.72
CAPN10-209ENST00000416591 CD163L1Q9NR16 1453 aa25.81■■□□□ 1.72
CAPN10-209ENST00000416591 GOLGA6L3A6NEY3 463 aa25.81■■□□□ 1.72
CAPN10-209ENST00000416591 FYB1O15117 783 aa25.81■■□□□ 1.72
CAPN10-209ENST00000416591 EIF5BO60841 1220 aaKnown RBP25.81■■□□□ 1.72
CAPN10-209ENST00000416591 TMPOP42166 694 aaKnown RBP25.81■■□□□ 1.72
CAPN10-209ENST00000416591 SSH1Q8WYL5 1049 aa25.8■■□□□ 1.72
CAPN10-209ENST00000416591 PLEKHF1Q96S99 279 aa25.8■■□□□ 1.72
CAPN10-209ENST00000416591 ANKRD26Q9UPS8 1709 aa25.8■■□□□ 1.72
CAPN10-209ENST00000416591 SMC5Q8IY18 1101 aa25.79■■□□□ 1.72
CAPN10-209ENST00000416591 MED14O60244 1454 aa25.78■■□□□ 1.72
CAPN10-209ENST00000416591 TRIM35Q9UPQ4 493 aa25.78■■□□□ 1.72
CAPN10-209ENST00000416591 IL16Q14005 1332 aa25.78■■□□□ 1.72
CAPN10-209ENST00000416591 ALKQ9UM73 1620 aa25.78■■□□□ 1.72
CAPN10-209ENST00000416591 FSD2A1L4K1 749 aa25.78■■□□□ 1.72
CAPN10-209ENST00000416591 HSCBQ8IWL3 235 aa25.77■■□□□ 1.72
CAPN10-209ENST00000416591 NOB1Q9ULX3 412 aaKnown RBP25.76■■□□□ 1.71
CAPN10-209ENST00000416591 RRAGDQ9NQL2 400 aaPredicted RBP25.76■■□□□ 1.71
CAPN10-209ENST00000416591 XRCC6P12956 609 aaKnown RBP eCLIP25.75■■□□□ 1.71
CAPN10-209ENST00000416591 HDGFL2Q7Z4V5 671 aaPredicted RBP25.75■■□□□ 1.71
CAPN10-209ENST00000416591 CDK19Q9BWU1 502 aa25.75■■□□□ 1.71
CAPN10-209ENST00000416591 STAG3Q9UJ98 1225 aa25.74■■□□□ 1.71
CAPN10-209ENST00000416591 KIF16BQ96L93 1317 aa25.73■■□□□ 1.71
CAPN10-209ENST00000416591 TRAK2O60296 914 aa25.73■■□□□ 1.71
CAPN10-209ENST00000416591 TMEM57Q8N5G2 664 aa25.73■■□□□ 1.71
CAPN10-209ENST00000416591 ZBTB40Q9NUA8 1239 aa25.73■■□□□ 1.71
CAPN10-209ENST00000416591 ARHGEF40Q8TER5 1519 aa25.73■■□□□ 1.71
CAPN10-209ENST00000416591 IPO8O15397 1037 aaKnown RBP25.72■■□□□ 1.71
CAPN10-209ENST00000416591 GZF1Q9H116 711 aaPredicted RBP25.72■■□□□ 1.71
CAPN10-209ENST00000416591 ARXQ96QS3 562 aa25.72■■□□□ 1.71
CAPN10-209ENST00000416591 CABP1Q9NZU7 370 aa25.71■■□□□ 1.71
CAPN10-209ENST00000416591 CYB5RLQ6IPT4 315 aa25.71■■□□□ 1.71
CAPN10-209ENST00000416591 DDX11L8A8MPP1 907 aa25.7■■□□□ 1.7
CAPN10-209ENST00000416591 DIAPH1O60610 1272 aaKnown RBP25.7■■□□□ 1.7
CAPN10-209ENST00000416591 RIPK4P57078 832 aa25.69■■□□□ 1.7
CAPN10-209ENST00000416591 RBM25P49756 843 aaKnown RBP25.69■■□□□ 1.7
CAPN10-209ENST00000416591 NCOA3Q9Y6Q9 1424 aa25.68■■□□□ 1.7
CAPN10-209ENST00000416591 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
CAPN10-209ENST00000416591 KIF20BQ96Q89 1820 aa25.68■■□□□ 1.7
CAPN10-209ENST00000416591 NUCB1Q02818 461 aa25.68■■□□□ 1.7
CAPN10-209ENST00000416591 ZNF692Q9BU19 519 aaPredicted RBP25.68■■□□□ 1.7
CAPN10-209ENST00000416591 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
CAPN10-209ENST00000416591 FAM69CQ0P6D2 419 aa25.67■■□□□ 1.7
CAPN10-209ENST00000416591 ALDH1L2Q3SY69 923 aa25.67■■□□□ 1.7
CAPN10-209ENST00000416591 SNX21Q969T3 373 aa25.67■■□□□ 1.7
CAPN10-209ENST00000416591 MRE11P49959 708 aa25.65■■□□□ 1.7
CAPN10-209ENST00000416591 PANK2Q9BZ23 570 aa25.64■■□□□ 1.7
CAPN10-209ENST00000416591 DDIT3P35638 169 aa25.63■■□□□ 1.69
CAPN10-209ENST00000416591 WAPLQ7Z5K2 1190 aa25.63■■□□□ 1.69
CAPN10-209ENST00000416591 CHD1LQ86WJ1 897 aa25.63■■□□□ 1.69
CAPN10-209ENST00000416591 LNPKQ9C0E8 428 aa25.63■■□□□ 1.69
CAPN10-209ENST00000416591 A2ML1A8K2U0 1454 aa25.63■■□□□ 1.69
CAPN10-209ENST00000416591 DLC1Q96QB1 1528 aa25.63■■□□□ 1.69
CAPN10-209ENST00000416591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.62■■□□□ 1.69
CAPN10-209ENST00000416591 REREQ9P2R6 1566 aa25.62■■□□□ 1.69
CAPN10-209ENST00000416591 PPP6R1Q9UPN7 881 aa25.62■■□□□ 1.69
CAPN10-209ENST00000416591 AGLP35573 1532 aa25.61■■□□□ 1.69
CAPN10-209ENST00000416591 ISY1Q9ULR0 285 aaKnown RBP25.61■■□□□ 1.69
CAPN10-209ENST00000416591 DIP2BQ9P265 1576 aa25.61■■□□□ 1.69
CAPN10-209ENST00000416591 CIZ1Q9ULV3 898 aaPredicted RBP25.6■■□□□ 1.69
CAPN10-209ENST00000416591 RIMS2Q9UQ26 1411 aa25.6■■□□□ 1.69
CAPN10-209ENST00000416591 CDC42BPGQ6DT37 1551 aa25.6■■□□□ 1.69
CAPN10-209ENST00000416591 BMP2KLQ5H9B9 411 aa25.6■■□□□ 1.69
CAPN10-209ENST00000416591 ATP7BP35670 1465 aa25.6■■□□□ 1.69
CAPN10-209ENST00000416591 TSPOAP1O95153 1857 aa25.59■■□□□ 1.69
CAPN10-209ENST00000416591 FCHSD2O94868 740 aa25.59■■□□□ 1.69
CAPN10-209ENST00000416591 ZNF428Q96B54 188 aa25.59■■□□□ 1.69
CAPN10-209ENST00000416591 SPATA31D1Q6ZQQ2 1576 aa25.59■■□□□ 1.69
CAPN10-209ENST00000416591 LRRC7Q96NW7 1537 aa25.59■■□□□ 1.69
CAPN10-209ENST00000416591 SETD1AO15047 1707 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms