RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 ANKRD36BQ8N2N9 1353 aa18.22■□□□□ 0.51
SF1-206ENST00000413725 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
SF1-206ENST00000413725 A0A1W2PP64 1363 aa18.21■□□□□ 0.51
SF1-206ENST00000413725 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
SF1-206ENST00000413725 KIF20BQ96Q89 1820 aa18.2■□□□□ 0.5
SF1-206ENST00000413725 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
SF1-206ENST00000413725 PAK3O75914 559 aaPredicted RBP18.19■□□□□ 0.5
SF1-206ENST00000413725 WASHC2AQ641Q2 1341 aa18.19■□□□□ 0.5
SF1-206ENST00000413725 JCADQ9P266 1359 aa18.18■□□□□ 0.5
SF1-206ENST00000413725 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
SF1-206ENST00000413725 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
SF1-206ENST00000413725 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
SF1-206ENST00000413725 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
SF1-206ENST00000413725 SSH2Q76I76 1423 aa18.16■□□□□ 0.5
SF1-206ENST00000413725 ABCA3Q99758 1704 aa18.16■□□□□ 0.5
SF1-206ENST00000413725 LMOD2Q6P5Q4 547 aa18.16■□□□□ 0.5
SF1-206ENST00000413725 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
SF1-206ENST00000413725 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
SF1-206ENST00000413725 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
SF1-206ENST00000413725 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
SF1-206ENST00000413725 TTC21BQ7Z4L5 1316 aa18.14■□□□□ 0.49
SF1-206ENST00000413725 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
SF1-206ENST00000413725 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
SF1-206ENST00000413725 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
SF1-206ENST00000413725 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
SF1-206ENST00000413725 ANKRD26Q9UPS8 1709 aa18.12■□□□□ 0.49
SF1-206ENST00000413725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
SF1-206ENST00000413725 PANK3Q9H999 370 aa18.12■□□□□ 0.49
SF1-206ENST00000413725 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
SF1-206ENST00000413725 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
SF1-206ENST00000413725 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
SF1-206ENST00000413725 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
SF1-206ENST00000413725 CARD14Q9BXL6 1004 aa18.09■□□□□ 0.49
SF1-206ENST00000413725 NLRP6P59044 892 aa18.08■□□□□ 0.48
SF1-206ENST00000413725 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.48
SF1-206ENST00000413725 CGNL1Q0VF96 1302 aa18.07■□□□□ 0.48
SF1-206ENST00000413725 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
SF1-206ENST00000413725 USP31Q70CQ4 1352 aa18.06■□□□□ 0.48
SF1-206ENST00000413725 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
SF1-206ENST00000413725 NME9Q86XW9 330 aa18.06■□□□□ 0.48
SF1-206ENST00000413725 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
SF1-206ENST00000413725 SLIT3O75094 1523 aa18.05■□□□□ 0.48
SF1-206ENST00000413725 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
SF1-206ENST00000413725 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
SF1-206ENST00000413725 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
SF1-206ENST00000413725 LTN1O94822 1766 aa18.04■□□□□ 0.48
SF1-206ENST00000413725 USP19O94966 1318 aa18.04■□□□□ 0.48
SF1-206ENST00000413725 OVOS2A0A0J9YW53 1432 aa18.04■□□□□ 0.48
SF1-206ENST00000413725 OVOS2Q6IE36 1432 aa18.04■□□□□ 0.48
SF1-206ENST00000413725 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
SF1-206ENST00000413725 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
SF1-206ENST00000413725 COG3Q96JB2 828 aa18.03■□□□□ 0.48
SF1-206ENST00000413725 NSD2O96028 1365 aa18.03■□□□□ 0.48
SF1-206ENST00000413725 LRP6O75581 1613 aa18.02■□□□□ 0.48
SF1-206ENST00000413725 FYB1O15117 783 aa18.02■□□□□ 0.48
SF1-206ENST00000413725 KCNH5Q8NCM2 988 aa18.01■□□□□ 0.47
SF1-206ENST00000413725 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
SF1-206ENST00000413725 ZRANB1Q9UGI0 708 aa18.01■□□□□ 0.47
SF1-206ENST00000413725 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
SF1-206ENST00000413725 MEX3CQ5U5Q3 659 aaKnown RBP18■□□□□ 0.47
SF1-206ENST00000413725 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
SF1-206ENST00000413725 COL14A1Q05707 1796 aaKnown RBP17.99■□□□□ 0.47
SF1-206ENST00000413725 NFAT5O94916 1531 aa17.99■□□□□ 0.47
SF1-206ENST00000413725 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
SF1-206ENST00000413725 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
SF1-206ENST00000413725 ADAMTS2O95450 1211 aa17.98■□□□□ 0.47
SF1-206ENST00000413725 GCP02774 474 aa17.98■□□□□ 0.47
SF1-206ENST00000413725 RGPD5Q99666 1765 aa17.98■□□□□ 0.47
SF1-206ENST00000413725 NPC1L1Q9UHC9 1359 aa17.97■□□□□ 0.47
SF1-206ENST00000413725 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
SF1-206ENST00000413725 SOX12O15370 315 aa17.96■□□□□ 0.47
SF1-206ENST00000413725 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
SF1-206ENST00000413725 CPDO75976 1380 aa17.95■□□□□ 0.46
SF1-206ENST00000413725 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
SF1-206ENST00000413725 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
SF1-206ENST00000413725 PRDM11Q9NQV5 511 aa17.94■□□□□ 0.46
SF1-206ENST00000413725 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.94■□□□□ 0.46
SF1-206ENST00000413725 COL18A1P39060 1754 aa17.94■□□□□ 0.46
SF1-206ENST00000413725 ABCC6O95255 1503 aa17.93■□□□□ 0.46
SF1-206ENST00000413725 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
SF1-206ENST00000413725 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
SF1-206ENST00000413725 C8orf37Q96NL8 207 aa17.93■□□□□ 0.46
SF1-206ENST00000413725 NGLY1Q96IV0 654 aa17.92■□□□□ 0.46
SF1-206ENST00000413725 LMO7Q8WWI1 1683 aa17.92■□□□□ 0.46
SF1-206ENST00000413725 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
SF1-206ENST00000413725 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
SF1-206ENST00000413725 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
SF1-206ENST00000413725 AATKQ6ZMQ8 1374 aa17.9■□□□□ 0.46
SF1-206ENST00000413725 FAM83GA6ND36 823 aa17.89■□□□□ 0.45
SF1-206ENST00000413725 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
SF1-206ENST00000413725 CHRNA2Q15822 529 aa17.89■□□□□ 0.45
SF1-206ENST00000413725 SLIT2O94813 1529 aa17.88■□□□□ 0.45
SF1-206ENST00000413725 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
SF1-206ENST00000413725 AFF2P51816 1311 aa17.88■□□□□ 0.45
SF1-206ENST00000413725 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
SF1-206ENST00000413725 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
SF1-206ENST00000413725 MAP3K19Q56UN5 1328 aa17.87■□□□□ 0.45
SF1-206ENST00000413725 RTL1A6NKG5 1358 aa17.87■□□□□ 0.45
SF1-206ENST00000413725 AMPHP49418 695 aa17.86■□□□□ 0.45
SF1-206ENST00000413725 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms