RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 COL14A1Q05707 1796 aaKnown RBP17.94■□□□□ 0.46
LIMS2-210ENST00000413578 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
LIMS2-210ENST00000413578 ATP7BP35670 1465 aa17.93■□□□□ 0.46
LIMS2-210ENST00000413578 LRP5O75197 1615 aa17.92■□□□□ 0.46
LIMS2-210ENST00000413578 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
LIMS2-210ENST00000413578 THSD7AQ9UPZ6 1657 aa17.91■□□□□ 0.46
LIMS2-210ENST00000413578 BAG6P46379 1132 aa17.91■□□□□ 0.46
LIMS2-210ENST00000413578 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
LIMS2-210ENST00000413578 DISP2A7MBM2 1401 aa17.9■□□□□ 0.46
LIMS2-210ENST00000413578 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
LIMS2-210ENST00000413578 A0A0G2JS52 829 aa17.89■□□□□ 0.45
LIMS2-210ENST00000413578 MYT1Q01538 1121 aa17.89■□□□□ 0.45
LIMS2-210ENST00000413578 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
LIMS2-210ENST00000413578 HRCP23327 699 aa17.87■□□□□ 0.45
LIMS2-210ENST00000413578 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
LIMS2-210ENST00000413578 SPATA31A1Q5TZJ5 1347 aa17.87■□□□□ 0.45
LIMS2-210ENST00000413578 POLR3AO14802 1390 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-210ENST00000413578 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
LIMS2-210ENST00000413578 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
LIMS2-210ENST00000413578 PAK3O75914 559 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-210ENST00000413578 EN1Q05925 392 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-210ENST00000413578 FAM182BQ5T319 152 aa17.86■□□□□ 0.45
LIMS2-210ENST00000413578 PSDA5PKW4 1024 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-210ENST00000413578 RGPD1P0DJD0 1748 aa17.84■□□□□ 0.45
LIMS2-210ENST00000413578 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.44
LIMS2-210ENST00000413578 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
LIMS2-210ENST00000413578 CHRNA2Q15822 529 aa17.82■□□□□ 0.44
LIMS2-210ENST00000413578 CDK19Q9BWU1 502 aa17.82■□□□□ 0.44
LIMS2-210ENST00000413578 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
LIMS2-210ENST00000413578 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
LIMS2-210ENST00000413578 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
LIMS2-210ENST00000413578 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
LIMS2-210ENST00000413578 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
LIMS2-210ENST00000413578 USP19O94966 1318 aa17.8■□□□□ 0.44
LIMS2-210ENST00000413578 ACEP12821 1306 aa17.8■□□□□ 0.44
LIMS2-210ENST00000413578 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
LIMS2-210ENST00000413578 NBPF8Q3BBV2 869 aa17.8■□□□□ 0.44
LIMS2-210ENST00000413578 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
LIMS2-210ENST00000413578 CPDO75976 1380 aa17.79■□□□□ 0.44
LIMS2-210ENST00000413578 NRKQ7Z2Y5 1582 aa17.79■□□□□ 0.44
LIMS2-210ENST00000413578 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
LIMS2-210ENST00000413578 FAM196AQ6ZSG2 479 aa17.79■□□□□ 0.44
LIMS2-210ENST00000413578 BARGINQ6ZT62 677 aa17.79■□□□□ 0.44
LIMS2-210ENST00000413578 R3HDM1Q15032 1099 aaKnown RBP17.78■□□□□ 0.44
LIMS2-210ENST00000413578 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
LIMS2-210ENST00000413578 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
LIMS2-210ENST00000413578 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.44
LIMS2-210ENST00000413578 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
LIMS2-210ENST00000413578 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.43
LIMS2-210ENST00000413578 TRIM37O94972 964 aa17.76■□□□□ 0.43
LIMS2-210ENST00000413578 KIAA1210Q9ULL0 1709 aa17.75■□□□□ 0.43
LIMS2-210ENST00000413578 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
LIMS2-210ENST00000413578 LARP1Q6PKG0 1096 aaKnown RBP17.74■□□□□ 0.43
LIMS2-210ENST00000413578 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
LIMS2-210ENST00000413578 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
LIMS2-210ENST00000413578 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
LIMS2-210ENST00000413578 APBA3O96018 575 aa17.72■□□□□ 0.43
LIMS2-210ENST00000413578 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
LIMS2-210ENST00000413578 GCP02774 474 aa17.71■□□□□ 0.43
LIMS2-210ENST00000413578 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
LIMS2-210ENST00000413578 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.43
LIMS2-210ENST00000413578 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
LIMS2-210ENST00000413578 EVA1CP58658 441 aa17.7■□□□□ 0.42
LIMS2-210ENST00000413578 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
LIMS2-210ENST00000413578 RREB1Q92766 1687 aa17.69■□□□□ 0.42
LIMS2-210ENST00000413578 NLRP13Q86W25 1043 aa17.69■□□□□ 0.42
LIMS2-210ENST00000413578 CENPJQ9HC77 1338 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-210ENST00000413578 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
LIMS2-210ENST00000413578 USP6P35125 1406 aa17.67■□□□□ 0.42
LIMS2-210ENST00000413578 SRPK2P78362 688 aaKnown RBP17.67■□□□□ 0.42
LIMS2-210ENST00000413578 SLIT3O75094 1523 aa17.67■□□□□ 0.42
LIMS2-210ENST00000413578 CRB1P82279 1406 aa17.66■□□□□ 0.42
LIMS2-210ENST00000413578 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
LIMS2-210ENST00000413578 NUP188Q5SRE5 1749 aa17.65■□□□□ 0.42
LIMS2-210ENST00000413578 PARP4Q9UKK3 1724 aaKnown RBP17.65■□□□□ 0.42
LIMS2-210ENST00000413578 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
LIMS2-210ENST00000413578 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
LIMS2-210ENST00000413578 C11orf95C9JLR9 678 aaPredicted RBP17.63■□□□□ 0.41
LIMS2-210ENST00000413578 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
LIMS2-210ENST00000413578 OVOS2A0A0J9YW53 1432 aa17.62■□□□□ 0.41
LIMS2-210ENST00000413578 OVOS2Q6IE36 1432 aa17.62■□□□□ 0.41
LIMS2-210ENST00000413578 NLRP6P59044 892 aa17.61■□□□□ 0.41
LIMS2-210ENST00000413578 NBPF14Q5TI25 921 aa17.61■□□□□ 0.41
LIMS2-210ENST00000413578 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
LIMS2-210ENST00000413578 PIK3C2AO00443 1686 aa17.59■□□□□ 0.41
LIMS2-210ENST00000413578 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
LIMS2-210ENST00000413578 BCL9O00512 1426 aa17.59■□□□□ 0.41
LIMS2-210ENST00000413578 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
LIMS2-210ENST00000413578 COL18A1P39060 1754 aa17.58■□□□□ 0.41
LIMS2-210ENST00000413578 PLSCR1O15162 318 aa17.58■□□□□ 0.4
LIMS2-210ENST00000413578 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
LIMS2-210ENST00000413578 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
LIMS2-210ENST00000413578 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
LIMS2-210ENST00000413578 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
LIMS2-210ENST00000413578 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
LIMS2-210ENST00000413578 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
LIMS2-210ENST00000413578 DDB1Q16531 1140 aa17.56■□□□□ 0.4
LIMS2-210ENST00000413578 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
LIMS2-210ENST00000413578 ARHGEF25Q86VW2 580 aa17.56■□□□□ 0.4
LIMS2-210ENST00000413578 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms