RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 TMEM132EQ6IEE7 984 aa17.68■□□□□ 0.42
COPS7B-210ENST00000413197 MYOM2P54296 1465 aa17.67■□□□□ 0.42
COPS7B-210ENST00000413197 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
COPS7B-210ENST00000413197 LTKP29376 864 aa17.67■□□□□ 0.42
COPS7B-210ENST00000413197 A0A0U1RQG5 324 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-210ENST00000413197 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
COPS7B-210ENST00000413197 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
COPS7B-210ENST00000413197 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-210ENST00000413197 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
COPS7B-210ENST00000413197 ZFYVE9O95405 1425 aa17.66■□□□□ 0.42
COPS7B-210ENST00000413197 RIMS2Q9UQ26 1411 aa17.66■□□□□ 0.42
COPS7B-210ENST00000413197 PMFBP1Q8TBY8 1022 aa17.63■□□□□ 0.41
COPS7B-210ENST00000413197 TBC1D32Q96NH3 1257 aa17.63■□□□□ 0.41
COPS7B-210ENST00000413197 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
COPS7B-210ENST00000413197 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
COPS7B-210ENST00000413197 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
COPS7B-210ENST00000413197 L1TD1Q5T7N2 865 aaKnown RBP17.62■□□□□ 0.41
COPS7B-210ENST00000413197 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
COPS7B-210ENST00000413197 VGFO15240 615 aaPredicted RBP17.62■□□□□ 0.41
COPS7B-210ENST00000413197 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
COPS7B-210ENST00000413197 CEP170BQ9Y4F5 1589 aaPredicted RBP17.61■□□□□ 0.41
COPS7B-210ENST00000413197 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
COPS7B-210ENST00000413197 PAXIP1Q6ZW49 1069 aaPredicted RBP17.6■□□□□ 0.41
COPS7B-210ENST00000413197 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
COPS7B-210ENST00000413197 C14orf93Q9H972 538 aaKnown RBP17.6■□□□□ 0.41
COPS7B-210ENST00000413197 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
COPS7B-210ENST00000413197 IQSEC2Q5JU85 1478 aa17.59■□□□□ 0.41
COPS7B-210ENST00000413197 TBC1D2Q9BYX2 928 aa17.59■□□□□ 0.41
COPS7B-210ENST00000413197 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
COPS7B-210ENST00000413197 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
COPS7B-210ENST00000413197 IGSF3O75054 1194 aa17.59■□□□□ 0.41
COPS7B-210ENST00000413197 ADGRB1O14514 1584 aa17.58■□□□□ 0.4
COPS7B-210ENST00000413197 TXNDC2Q86VQ3 553 aa17.57■□□□□ 0.4
COPS7B-210ENST00000413197 BCCIPQ9P287 314 aaKnown RBP eCLIP17.57■□□□□ 0.44e-6■□□□□ 11.3
COPS7B-210ENST00000413197 NRXN3Q9Y4C0 1643 aa17.57■□□□□ 0.4
COPS7B-210ENST00000413197 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
COPS7B-210ENST00000413197 RRAGDQ9NQL2 400 aaPredicted RBP17.57■□□□□ 0.4
COPS7B-210ENST00000413197 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
COPS7B-210ENST00000413197 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
COPS7B-210ENST00000413197 RLBP1P12271 317 aa17.56■□□□□ 0.4
COPS7B-210ENST00000413197 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
COPS7B-210ENST00000413197 SLC26A8Q96RN1 970 aa17.56■□□□□ 0.4
COPS7B-210ENST00000413197 STK26Q9P289 416 aa17.56■□□□□ 0.4
COPS7B-210ENST00000413197 HSPA2P54652 639 aa17.55■□□□□ 0.4
COPS7B-210ENST00000413197 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
COPS7B-210ENST00000413197 RUNDC1Q96C34 613 aa17.55■□□□□ 0.4
COPS7B-210ENST00000413197 FSD2A1L4K1 749 aa17.55■□□□□ 0.4
COPS7B-210ENST00000413197 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
COPS7B-210ENST00000413197 THEMISQ8N1K5 641 aaPredicted RBP17.54■□□□□ 0.4
COPS7B-210ENST00000413197 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
COPS7B-210ENST00000413197 METP08581 1390 aa17.54■□□□□ 0.4
COPS7B-210ENST00000413197 RBM10P98175 930 aaKnown RBP17.53■□□□□ 0.4
COPS7B-210ENST00000413197 SLIT1O75093 1534 aa17.53■□□□□ 0.4
COPS7B-210ENST00000413197 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
COPS7B-210ENST00000413197 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
COPS7B-210ENST00000413197 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
COPS7B-210ENST00000413197 ZNF142P52746 1687 aaPredicted RBP17.52■□□□□ 0.4
COPS7B-210ENST00000413197 SETD1AO15047 1707 aaKnown RBP17.51■□□□□ 0.39
COPS7B-210ENST00000413197 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
COPS7B-210ENST00000413197 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
COPS7B-210ENST00000413197 ADAMTS13Q76LX8 1427 aa17.51■□□□□ 0.39
COPS7B-210ENST00000413197 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
COPS7B-210ENST00000413197 MCM4P33991 863 aa17.51■□□□□ 0.39
COPS7B-210ENST00000413197 GOLGA6L3A6NEY3 463 aa17.49■□□□□ 0.39
COPS7B-210ENST00000413197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPS7B-210ENST00000413197 RRP7AQ9Y3A4 280 aaKnown RBP17.49■□□□□ 0.39
COPS7B-210ENST00000413197 NSD3Q9BZ95 1437 aa17.49■□□□□ 0.39
COPS7B-210ENST00000413197 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPS7B-210ENST00000413197 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
COPS7B-210ENST00000413197 NAP1L5Q96NT1 182 aaPredicted RBP17.48■□□□□ 0.39
COPS7B-210ENST00000413197 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
COPS7B-210ENST00000413197 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
COPS7B-210ENST00000413197 MORC1Q86VD1 984 aa17.48■□□□□ 0.39
COPS7B-210ENST00000413197 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
COPS7B-210ENST00000413197 SETBP1Q9Y6X0 1596 aa17.48■□□□□ 0.39
COPS7B-210ENST00000413197 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
COPS7B-210ENST00000413197 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
COPS7B-210ENST00000413197 CHMP5Q9NZZ3 219 aa17.47■□□□□ 0.39
COPS7B-210ENST00000413197 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
COPS7B-210ENST00000413197 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.39
COPS7B-210ENST00000413197 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
COPS7B-210ENST00000413197 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
COPS7B-210ENST00000413197 MYH16Q9H6N6 1097 aa17.45■□□□□ 0.38
COPS7B-210ENST00000413197 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
COPS7B-210ENST00000413197 CLCN1P35523 988 aa17.43■□□□□ 0.38
COPS7B-210ENST00000413197 PTPRUQ92729 1446 aa17.43■□□□□ 0.38
COPS7B-210ENST00000413197 ADGRB2O60241 1585 aa17.43■□□□□ 0.38
COPS7B-210ENST00000413197 MED14O60244 1454 aa17.43■□□□□ 0.38
COPS7B-210ENST00000413197 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
COPS7B-210ENST00000413197 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
COPS7B-210ENST00000413197 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
COPS7B-210ENST00000413197 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
COPS7B-210ENST00000413197 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
COPS7B-210ENST00000413197 TRAK2O60296 914 aa17.42■□□□□ 0.38
COPS7B-210ENST00000413197 PRAM1Q96QH2 718 aa17.42■□□□□ 0.38
COPS7B-210ENST00000413197 HMGB1P09429 215 aaKnown RBP17.42■□□□□ 0.38
COPS7B-210ENST00000413197 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-210ENST00000413197 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-210ENST00000413197 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-210ENST00000413197 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms