RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 RIPK4P57078 832 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 IFNL2Q8IZJ0 200 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 BTG4Q9NY30 223 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 MARCH6O60337 910 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 FKBP5Q13451 457 aaPredicted RBP9.31□□□□□ -0.92
SH3D19-203ENST00000409598 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.924e-10■■□□□ 11.8
SH3D19-203ENST00000409598 NOP58Q9Y2X3 529 aaKnown RBP9.3□□□□□ -0.92
SH3D19-203ENST00000409598 ZCRB1Q8TBF4 217 aaKnown RBP9.3□□□□□ -0.92
SH3D19-203ENST00000409598 MPHOSPH8Q99549 860 aa9.3□□□□□ -0.92
SH3D19-203ENST00000409598 PHF14O94880 888 aa9.3□□□□□ -0.92
SH3D19-203ENST00000409598 IL2RBP14784 551 aa9.3□□□□□ -0.92
SH3D19-203ENST00000409598 CCDC30Q5VVM6 783 aa9.3□□□□□ -0.92
SH3D19-203ENST00000409598 GPATCH8Q9UKJ3 1502 aaKnown RBP9.3□□□□□ -0.92
SH3D19-203ENST00000409598 NUP153P49790 1475 aaKnown RBP9.3□□□□□ -0.92
SH3D19-203ENST00000409598 JDP2Q8WYK2 163 aa9.29□□□□□ -0.92
SH3D19-203ENST00000409598 BCL2L13Q9BXK5 485 aa9.29□□□□□ -0.92
SH3D19-203ENST00000409598 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
SH3D19-203ENST00000409598 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
SH3D19-203ENST00000409598 TIAM1Q13009 1591 aa9.29□□□□□ -0.92
SH3D19-203ENST00000409598 IGHMBP2P38935 993 aaKnown RBP9.29□□□□□ -0.92
SH3D19-203ENST00000409598 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
SH3D19-203ENST00000409598 APBB1O00213 710 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 FAM196AQ6ZSG2 479 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 CHMP4CQ96CF2 233 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 API5Q9BZZ5 524 aaKnown RBP9.28□□□□□ -0.92
SH3D19-203ENST00000409598 RTCBQ9Y3I0 505 aaKnown RBP9.28□□□□□ -0.92
SH3D19-203ENST00000409598 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 CNNM1Q9NRU3 951 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 TCP11L2Q8N4U5 519 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 NCOA1Q15788 1441 aa9.28□□□□□ -0.92
SH3D19-203ENST00000409598 NECTIN2Q92692 538 aa9.27□□□□□ -0.92
SH3D19-203ENST00000409598 C14orf93Q9H972 538 aaKnown RBP9.27□□□□□ -0.92
SH3D19-203ENST00000409598 SYCP2Q9BX26 1530 aa9.27□□□□□ -0.92
SH3D19-203ENST00000409598 PTCD1O75127 700 aaKnown RBP9.27□□□□□ -0.93
SH3D19-203ENST00000409598 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
SH3D19-203ENST00000409598 RBM6P78332 1123 aaKnown RBP9.27□□□□□ -0.93
SH3D19-203ENST00000409598 NOS1P29475 1434 aa9.27□□□□□ -0.93
SH3D19-203ENST00000409598 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
SH3D19-203ENST00000409598 BTBD11A6QL63 1104 aa9.27□□□□□ -0.93
SH3D19-203ENST00000409598 ELL2O00472 640 aaPredicted RBP9.27□□□□□ -0.93
SH3D19-203ENST00000409598 CCDC27Q2M243 656 aa9.27□□□□□ -0.93
SH3D19-203ENST00000409598 ABCC5O15440 1437 aa9.27□□□□□ -0.93
SH3D19-203ENST00000409598 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
SH3D19-203ENST00000409598 CCDC146Q8IYE0 955 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 CCER2I3L3R5 266 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 TCERG1O14776 1098 aaKnown RBP9.26□□□□□ -0.93
SH3D19-203ENST00000409598 MYO1BO43795 1136 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 SYNE3Q6ZMZ3 975 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 ACEP12821 1306 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 TRPM2O94759 1503 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 DHX16O60231 1041 aaKnown RBP9.26□□□□□ -0.93
SH3D19-203ENST00000409598 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 SLC12A5Q9H2X9 1139 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 TMEM2Q9UHN6 1383 aa9.26□□□□□ -0.93
SH3D19-203ENST00000409598 PLIN1O60240 522 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 SLC3A2P08195 630 aaKnown RBP9.25□□□□□ -0.93
SH3D19-203ENST00000409598 ITSN2Q9NZM3 1697 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 KRT27Q7Z3Y8 459 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 ZNF219Q9P2Y4 722 aaPredicted RBP9.25□□□□□ -0.93
SH3D19-203ENST00000409598 ZNF335Q9H4Z2 1342 aaPredicted RBP9.25□□□□□ -0.93
SH3D19-203ENST00000409598 NINLQ9Y2I6 1382 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
SH3D19-203ENST00000409598 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
SH3D19-203ENST00000409598 PPP1R42Q7Z4L9 355 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 CHD1O14646 1710 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 GRM1Q13255 1194 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 CNKSR2Q8WXI2 1034 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 HDAC9Q9UKV0 1011 aa9.25□□□□□ -0.93
SH3D19-203ENST00000409598 TTC21BQ7Z4L5 1316 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 SAMD1Q6SPF0 538 aaPredicted RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 FMNL2Q96PY5 1086 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 GNAT3A8MTJ3 354 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 DDX46Q7L014 1031 aaKnown RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 CCNL1Q9UK58 526 aaPredicted RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 IKQ13123 557 aaPredicted RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 RWDD1Q9H446 243 aaPredicted RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 RIMBP3CA6NJZ7 1639 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 RIMBP3BA6NNM3 1639 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 RIMBP3Q9UFD9 1639 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 IFIT2P09913 472 aaKnown RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 ZSCAN29Q8IWY8 852 aaPredicted RBP9.24□□□□□ -0.93
SH3D19-203ENST00000409598 SETDB2Q96T68 719 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 MAGI3Q5TCQ9 1506 aa9.24□□□□□ -0.93
SH3D19-203ENST00000409598 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
SH3D19-203ENST00000409598 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
SH3D19-203ENST00000409598 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
SH3D19-203ENST00000409598 NBPF5PQ86XG9 351 aaPredicted RBP9.23□□□□□ -0.93
SH3D19-203ENST00000409598 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
SH3D19-203ENST00000409598 MAPKBP1O60336 1514 aa9.23□□□□□ -0.93
SH3D19-203ENST00000409598 APPP05067 770 aa9.23□□□□□ -0.93
SH3D19-203ENST00000409598 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms