RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
PTMA-202ENST00000409115 DIP2AQ14689 1571 aa14.85□□□□□ -0.03
PTMA-202ENST00000409115 PLEKHG1Q9ULL1 1385 aa14.85□□□□□ -0.03
PTMA-202ENST00000409115 XRN1Q8IZH2 1706 aaKnown RBP14.84□□□□□ -0.03
PTMA-202ENST00000409115 GPHNQ9NQX3 736 aaPredicted RBP14.84□□□□□ -0.03
PTMA-202ENST00000409115 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
PTMA-202ENST00000409115 TMC2Q8TDI7 906 aa14.83□□□□□ -0.04
PTMA-202ENST00000409115 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
PTMA-202ENST00000409115 POTEFA5A3E0 1075 aa14.82□□□□□ -0.04
PTMA-202ENST00000409115 NUTM2DQ5VT03 806 aaPredicted RBP14.82□□□□□ -0.04
PTMA-202ENST00000409115 NALCNQ8IZF0 1738 aa14.82□□□□□ -0.04
PTMA-202ENST00000409115 PPP1R15AO75807 674 aaPredicted RBP14.81□□□□□ -0.04
PTMA-202ENST00000409115 PPP1R15BQ5SWA1 713 aa14.81□□□□□ -0.04
PTMA-202ENST00000409115 TRPM2O94759 1503 aa14.81□□□□□ -0.04
PTMA-202ENST00000409115 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
PTMA-202ENST00000409115 ARHGEF1Q92888 912 aaKnown RBP14.79□□□□□ -0.04
PTMA-202ENST00000409115 JCADQ9P266 1359 aa14.79□□□□□ -0.04
PTMA-202ENST00000409115 SLC52A1Q9NWF4 448 aa14.78□□□□□ -0.04
PTMA-202ENST00000409115 PTPRUQ92729 1446 aa14.77□□□□□ -0.04
PTMA-202ENST00000409115 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
PTMA-202ENST00000409115 CLTCL1P53675 1640 aa14.77□□□□□ -0.05
PTMA-202ENST00000409115 KIF1BO60333 1816 aa14.76□□□□□ -0.05
PTMA-202ENST00000409115 DSG2Q14126 1118 aa14.75□□□□□ -0.05
PTMA-202ENST00000409115 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
PTMA-202ENST00000409115 ASXL1Q8IXJ9 1541 aa14.75□□□□□ -0.05
PTMA-202ENST00000409115 SETBP1Q9Y6X0 1596 aa14.74□□□□□ -0.05
PTMA-202ENST00000409115 C2orf72A6NCS6 295 aa14.74□□□□□ -0.05
PTMA-202ENST00000409115 CAMK2BQ13554 666 aa14.74□□□□□ -0.05
PTMA-202ENST00000409115 FOXK1P85037 733 aa14.73□□□□□ -0.05
PTMA-202ENST00000409115 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
PTMA-202ENST00000409115 KIF3CO14782 793 aa14.71□□□□□ -0.05
PTMA-202ENST00000409115 NEXMIFQ5QGS0 1516 aa14.71□□□□□ -0.06
PTMA-202ENST00000409115 TRIM52Q96A61 297 aa14.7□□□□□ -0.06
PTMA-202ENST00000409115 NCOA3Q9Y6Q9 1424 aa14.69□□□□□ -0.06
PTMA-202ENST00000409115 MEX3CQ5U5Q3 659 aaKnown RBP14.69□□□□□ -0.06
PTMA-202ENST00000409115 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
PTMA-202ENST00000409115 MST1RQ04912 1400 aa14.68□□□□□ -0.06
PTMA-202ENST00000409115 ITGAEP38570 1179 aa14.68□□□□□ -0.06
PTMA-202ENST00000409115 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
PTMA-202ENST00000409115 ARIH1Q9Y4X5 557 aaPredicted RBP14.68□□□□□ -0.06
PTMA-202ENST00000409115 NUP155O75694 1391 aa14.68□□□□□ -0.06
PTMA-202ENST00000409115 ROCK1Q13464 1354 aa14.68□□□□□ -0.06
PTMA-202ENST00000409115 PLPP6Q8IY26 295 aa14.67□□□□□ -0.06
PTMA-202ENST00000409115 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTMA-202ENST00000409115 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
PTMA-202ENST00000409115 SPATA31A6Q5VVP1 1343 aa14.66□□□□□ -0.06
PTMA-202ENST00000409115 DCCP43146 1447 aa14.66□□□□□ -0.06
PTMA-202ENST00000409115 PPLO60437 1756 aa14.66□□□□□ -0.06
PTMA-202ENST00000409115 NUTM2BA6NNL0 878 aaPredicted RBP14.66□□□□□ -0.06
PTMA-202ENST00000409115 NUTM2EB1AL46 878 aaPredicted RBP14.66□□□□□ -0.06
PTMA-202ENST00000409115 BRINP3Q76B58 766 aa14.66□□□□□ -0.06
PTMA-202ENST00000409115 NUTM2AQ8IVF1 878 aaPredicted RBP14.66□□□□□ -0.06
PTMA-202ENST00000409115 AMOTL2Q9Y2J4 779 aa14.66□□□□□ -0.06
PTMA-202ENST00000409115 ATF3P18847 181 aa14.65□□□□□ -0.06
PTMA-202ENST00000409115 TPRNQ4KMQ1 711 aa14.65□□□□□ -0.06
PTMA-202ENST00000409115 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
PTMA-202ENST00000409115 PLSCR2Q9NRY7 297 aa14.65□□□□□ -0.06
PTMA-202ENST00000409115 METP08581 1390 aa14.64□□□□□ -0.07
PTMA-202ENST00000409115 DDX17Q92841 729 aaKnown RBP14.64□□□□□ -0.07
PTMA-202ENST00000409115 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
PTMA-202ENST00000409115 ADGRL3Q9HAR2 1447 aa14.64□□□□□ -0.07
PTMA-202ENST00000409115 MARF1Q9Y4F3 1742 aaKnown RBP14.63□□□□□ -0.07
PTMA-202ENST00000409115 HDGFP51858 240 aaKnown RBP14.63□□□□□ -0.07
PTMA-202ENST00000409115 RGS12O14924 1447 aa14.63□□□□□ -0.07
PTMA-202ENST00000409115 LAMC1P11047 1609 aa14.63□□□□□ -0.07
PTMA-202ENST00000409115 SETD5Q9C0A6 1442 aa14.61□□□□□ -0.07
PTMA-202ENST00000409115 UPF1Q92900 1129 aaKnown RBP eCLIP14.61□□□□□ -0.079e-18■■■■■ 29.3
PTMA-202ENST00000409115 EMILIN3Q9NT22 766 aa14.61□□□□□ -0.07
PTMA-202ENST00000409115 AFF2P51816 1311 aa14.61□□□□□ -0.07
PTMA-202ENST00000409115 TULP1O00294 542 aaPredicted RBP14.6□□□□□ -0.07
PTMA-202ENST00000409115 PRKCSHP14314 528 aaPredicted RBP14.6□□□□□ -0.07
PTMA-202ENST00000409115 ZNF772Q68DY9 489 aaPredicted RBP14.6□□□□□ -0.07
PTMA-202ENST00000409115 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
PTMA-202ENST00000409115 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
PTMA-202ENST00000409115 SEMA3EO15041 775 aa14.59□□□□□ -0.07
PTMA-202ENST00000409115 ZNF326Q5BKZ1 582 aaKnown RBP14.59□□□□□ -0.07
PTMA-202ENST00000409115 IFT172Q9UG01 1749 aa14.58□□□□□ -0.07
PTMA-202ENST00000409115 CDK12Q9NYV4 1490 aaPredicted RBP14.58□□□□□ -0.08
PTMA-202ENST00000409115 DPYSL4O14531 572 aa14.58□□□□□ -0.08
PTMA-202ENST00000409115 COL22A1Q8NFW1 1626 aaPredicted RBP14.57□□□□□ -0.08
PTMA-202ENST00000409115 C8orf37Q96NL8 207 aa14.56□□□□□ -0.08
PTMA-202ENST00000409115 C1orf167Q5SNV9 1468 aa14.56□□□□□ -0.08
PTMA-202ENST00000409115 TESPA1A2RU30 521 aaPredicted RBP14.55□□□□□ -0.08
PTMA-202ENST00000409115 RXRBP28702 533 aa14.55□□□□□ -0.08
PTMA-202ENST00000409115 RGPD8O14715 1765 aaPredicted RBP14.55□□□□□ -0.08
PTMA-202ENST00000409115 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
PTMA-202ENST00000409115 ROBO2Q9HCK4 1378 aa14.53□□□□□ -0.08
PTMA-202ENST00000409115 KNDC1Q76NI1 1749 aa14.52□□□□□ -0.08
PTMA-202ENST00000409115 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.08
PTMA-202ENST00000409115 NAIPQ13075 1403 aa14.52□□□□□ -0.08
PTMA-202ENST00000409115 BRWD3Q6RI45 1802 aa14.52□□□□□ -0.09
PTMA-202ENST00000409115 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
PTMA-202ENST00000409115 ABCA3Q99758 1704 aa14.5□□□□□ -0.09
PTMA-202ENST00000409115 FMN2Q9NZ56 1722 aa14.5□□□□□ -0.09
PTMA-202ENST00000409115 SPDYE16A6NNV3 312 aaPredicted RBP14.5□□□□□ -0.09
PTMA-202ENST00000409115 ADAMTS2O95450 1211 aa14.5□□□□□ -0.09
PTMA-202ENST00000409115 PDIA6Q15084 440 aa14.5□□□□□ -0.09
PTMA-202ENST00000409115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.5□□□□□ -0.095e-8■■■■□ 25.8
PTMA-202ENST00000409115 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.49□□□□□ -0.09
PTMA-202ENST00000409115 MAP3K9P80192 1104 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms