RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
RPE-203ENST00000408981 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
RPE-203ENST00000408981 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
RPE-203ENST00000408981 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
RPE-203ENST00000408981 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPE-203ENST00000408981 KRT28Q7Z3Y7 464 aa13.44□□□□□ -0.26
RPE-203ENST00000408981 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
RPE-203ENST00000408981 ADCY9O60503 1353 aa13.44□□□□□ -0.26
RPE-203ENST00000408981 GOLGB1Q14789 3259 aaKnown RBP13.43□□□□□ -0.26
RPE-203ENST00000408981 PLSCR1O15162 318 aa13.43□□□□□ -0.26
RPE-203ENST00000408981 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
RPE-203ENST00000408981 NUTM2FA1L443 756 aa13.42□□□□□ -0.26
RPE-203ENST00000408981 SLC15A2Q16348 729 aa13.42□□□□□ -0.26
RPE-203ENST00000408981 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
RPE-203ENST00000408981 TOMM70O94826 608 aa13.41□□□□□ -0.26
RPE-203ENST00000408981 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
RPE-203ENST00000408981 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
RPE-203ENST00000408981 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
RPE-203ENST00000408981 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
RPE-203ENST00000408981 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
RPE-203ENST00000408981 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
RPE-203ENST00000408981 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
RPE-203ENST00000408981 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
RPE-203ENST00000408981 PSME1Q06323 249 aa13.37□□□□□ -0.27
RPE-203ENST00000408981 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
RPE-203ENST00000408981 COL14A1Q05707 1796 aaKnown RBP13.37□□□□□ -0.27
RPE-203ENST00000408981 PROM2Q8N271 834 aa13.36□□□□□ -0.27
RPE-203ENST00000408981 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
RPE-203ENST00000408981 POLD1P28340 1107 aa13.35□□□□□ -0.27
RPE-203ENST00000408981 CDC42BPGQ6DT37 1551 aa13.34□□□□□ -0.27
RPE-203ENST00000408981 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
RPE-203ENST00000408981 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
RPE-203ENST00000408981 PCNTO95613 3336 aa13.34□□□□□ -0.27
RPE-203ENST00000408981 TECPR2O15040 1411 aa13.33□□□□□ -0.28
RPE-203ENST00000408981 HFM1A2PYH4 1435 aa13.32□□□□□ -0.28
RPE-203ENST00000408981 MSH5O43196 834 aa13.31□□□□□ -0.28
RPE-203ENST00000408981 TXNRD1Q16881 649 aa13.31□□□□□ -0.28
RPE-203ENST00000408981 USP19O94966 1318 aa13.31□□□□□ -0.28
RPE-203ENST00000408981 ZNF326Q5BKZ1 582 aaKnown RBP13.3□□□□□ -0.28
RPE-203ENST00000408981 BARGINQ6ZT62 677 aa13.3□□□□□ -0.28
RPE-203ENST00000408981 SBNO1A3KN83 1393 aa13.3□□□□□ -0.28
RPE-203ENST00000408981 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
RPE-203ENST00000408981 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
RPE-203ENST00000408981 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
RPE-203ENST00000408981 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
RPE-203ENST00000408981 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
RPE-203ENST00000408981 OVOS2A0A0G2JMS6 1433 aa13.28□□□□□ -0.28
RPE-203ENST00000408981 OVOS2A0A0J9YW53 1432 aa13.28□□□□□ -0.28
RPE-203ENST00000408981 OVOS2Q6IE36 1432 aa13.28□□□□□ -0.28
RPE-203ENST00000408981 NAIPQ13075 1403 aa13.27□□□□□ -0.29
RPE-203ENST00000408981 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
RPE-203ENST00000408981 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
RPE-203ENST00000408981 PMFBP1Q8TBY8 1022 aa13.26□□□□□ -0.29
RPE-203ENST00000408981 KIAA1210Q9ULL0 1709 aa13.25□□□□□ -0.29
RPE-203ENST00000408981 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
RPE-203ENST00000408981 FSTL1Q12841 308 aa13.24□□□□□ -0.29
RPE-203ENST00000408981 ABHD8Q96I13 439 aa13.24□□□□□ -0.29
RPE-203ENST00000408981 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
RPE-203ENST00000408981 EVA1CP58658 441 aa13.23□□□□□ -0.29
RPE-203ENST00000408981 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
RPE-203ENST00000408981 NMRK2Q9NPI5 230 aa13.23□□□□□ -0.29
RPE-203ENST00000408981 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
RPE-203ENST00000408981 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
RPE-203ENST00000408981 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
RPE-203ENST00000408981 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
RPE-203ENST00000408981 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
RPE-203ENST00000408981 RGS19P49795 217 aa13.21□□□□□ -0.29
RPE-203ENST00000408981 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
RPE-203ENST00000408981 TOPAZ1Q8N9V7 1692 aa13.2□□□□□ -0.3
RPE-203ENST00000408981 CCDC85CA6NKD9 419 aa13.19□□□□□ -0.3
RPE-203ENST00000408981 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
RPE-203ENST00000408981 PEAK1Q9H792 1746 aa13.18□□□□□ -0.3
RPE-203ENST00000408981 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
RPE-203ENST00000408981 FOXN1O15353 648 aa13.17□□□□□ -0.3
RPE-203ENST00000408981 ZNF827Q17R98 1081 aa13.17□□□□□ -0.3
RPE-203ENST00000408981 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
RPE-203ENST00000408981 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
RPE-203ENST00000408981 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
RPE-203ENST00000408981 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
RPE-203ENST00000408981 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
RPE-203ENST00000408981 ATP7BP35670 1465 aa13.16□□□□□ -0.3
RPE-203ENST00000408981 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
RPE-203ENST00000408981 FMN2Q9NZ56 1722 aa13.15□□□□□ -0.3
RPE-203ENST00000408981 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
RPE-203ENST00000408981 PARP4Q9UKK3 1724 aaKnown RBP13.14□□□□□ -0.31
RPE-203ENST00000408981 DDB1Q16531 1140 aa13.13□□□□□ -0.31
RPE-203ENST00000408981 E9PCH4 1651 aa13.12□□□□□ -0.31
RPE-203ENST00000408981 CTCFP49711 727 aaPredicted RBP13.11□□□□□ -0.31
RPE-203ENST00000408981 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
RPE-203ENST00000408981 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
RPE-203ENST00000408981 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
RPE-203ENST00000408981 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
RPE-203ENST00000408981 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
RPE-203ENST00000408981 DAPK1P53355 1430 aa13.1□□□□□ -0.31
RPE-203ENST00000408981 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
RPE-203ENST00000408981 STK26Q9P289 416 aa13.09□□□□□ -0.31
RPE-203ENST00000408981 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
RPE-203ENST00000408981 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
RPE-203ENST00000408981 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
RPE-203ENST00000408981 LBX1P52954 281 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms