RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 KRT28Q7Z3Y7 464 aa12.96□□□□□ -0.33
GPN1-202ENST00000407583 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 CHIC2Q9UKJ5 165 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 DAPK1P53355 1430 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 ATP10DQ9P241 1426 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
GPN1-202ENST00000407583 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
GPN1-202ENST00000407583 E9PCH4 1651 aa12.94□□□□□ -0.34
GPN1-202ENST00000407583 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
GPN1-202ENST00000407583 DNAJC5GQ8N7S2 189 aa12.93□□□□□ -0.34
GPN1-202ENST00000407583 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
GPN1-202ENST00000407583 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
GPN1-202ENST00000407583 NAIPQ13075 1403 aa12.92□□□□□ -0.34
GPN1-202ENST00000407583 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
GPN1-202ENST00000407583 ZNF326Q5BKZ1 582 aaKnown RBP12.92□□□□□ -0.34
GPN1-202ENST00000407583 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
GPN1-202ENST00000407583 SPATA31A1Q5TZJ5 1347 aa12.91□□□□□ -0.34
GPN1-202ENST00000407583 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
GPN1-202ENST00000407583 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
GPN1-202ENST00000407583 ARXQ96QS3 562 aa12.91□□□□□ -0.34
GPN1-202ENST00000407583 GPBP1L1Q9HC44 474 aaPredicted RBP12.91□□□□□ -0.34
GPN1-202ENST00000407583 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
GPN1-202ENST00000407583 PCNTO95613 3336 aa12.9□□□□□ -0.34
GPN1-202ENST00000407583 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
GPN1-202ENST00000407583 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
GPN1-202ENST00000407583 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
GPN1-202ENST00000407583 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
GPN1-202ENST00000407583 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
GPN1-202ENST00000407583 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
GPN1-202ENST00000407583 APLP1P51693 650 aa12.88□□□□□ -0.35
GPN1-202ENST00000407583 TECPR2O15040 1411 aa12.88□□□□□ -0.35
GPN1-202ENST00000407583 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
GPN1-202ENST00000407583 PSME1Q06323 249 aa12.86□□□□□ -0.35
GPN1-202ENST00000407583 ANKRD50Q9ULJ7 1429 aa12.86□□□□□ -0.35
GPN1-202ENST00000407583 PLSCR1O15162 318 aa12.85□□□□□ -0.35
GPN1-202ENST00000407583 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
GPN1-202ENST00000407583 PROM2Q8N271 834 aa12.85□□□□□ -0.35
GPN1-202ENST00000407583 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
GPN1-202ENST00000407583 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
GPN1-202ENST00000407583 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.362e-11■■■■□ 20.9
GPN1-202ENST00000407583 STK32BQ9NY57 414 aa12.83□□□□□ -0.36
GPN1-202ENST00000407583 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
GPN1-202ENST00000407583 SLC15A2Q16348 729 aa12.82□□□□□ -0.36
GPN1-202ENST00000407583 PTF1AQ7RTS3 328 aa12.82□□□□□ -0.36
GPN1-202ENST00000407583 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
GPN1-202ENST00000407583 ADCY9O60503 1353 aa12.82□□□□□ -0.36
GPN1-202ENST00000407583 KANK4Q5T7N3 995 aaPredicted RBP12.81□□□□□ -0.36
GPN1-202ENST00000407583 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
GPN1-202ENST00000407583 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
GPN1-202ENST00000407583 PHF8Q9UPP1 1060 aa12.81□□□□□ -0.36
GPN1-202ENST00000407583 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
GPN1-202ENST00000407583 WAPLQ7Z5K2 1190 aa12.81□□□□□ -0.36
GPN1-202ENST00000407583 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
GPN1-202ENST00000407583 NRXN1Q9ULB1 1477 aa12.8□□□□□ -0.36
GPN1-202ENST00000407583 KIF3CO14782 793 aa12.8□□□□□ -0.36
GPN1-202ENST00000407583 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
GPN1-202ENST00000407583 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
GPN1-202ENST00000407583 APLP2Q06481 763 aa12.79□□□□□ -0.36
GPN1-202ENST00000407583 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
GPN1-202ENST00000407583 PEAK1Q9H792 1746 aa12.78□□□□□ -0.36
GPN1-202ENST00000407583 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
GPN1-202ENST00000407583 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
GPN1-202ENST00000407583 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
GPN1-202ENST00000407583 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
GPN1-202ENST00000407583 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
GPN1-202ENST00000407583 HTRA3P83110 453 aa12.77□□□□□ -0.37
GPN1-202ENST00000407583 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
GPN1-202ENST00000407583 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
GPN1-202ENST00000407583 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
GPN1-202ENST00000407583 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
GPN1-202ENST00000407583 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
GPN1-202ENST00000407583 RGPD8O14715 1765 aaPredicted RBP12.75□□□□□ -0.37
GPN1-202ENST00000407583 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
GPN1-202ENST00000407583 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
GPN1-202ENST00000407583 ALS2Q96Q42 1657 aa12.75□□□□□ -0.37
GPN1-202ENST00000407583 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
GPN1-202ENST00000407583 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
GPN1-202ENST00000407583 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
GPN1-202ENST00000407583 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
GPN1-202ENST00000407583 STK26Q9P289 416 aa12.73□□□□□ -0.37
GPN1-202ENST00000407583 SBF2Q86WG5 1849 aa12.73□□□□□ -0.37
GPN1-202ENST00000407583 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
GPN1-202ENST00000407583 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
GPN1-202ENST00000407583 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
GPN1-202ENST00000407583 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
GPN1-202ENST00000407583 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
GPN1-202ENST00000407583 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
GPN1-202ENST00000407583 ATP7BP35670 1465 aa12.71□□□□□ -0.37
GPN1-202ENST00000407583 IFT172Q9UG01 1749 aa12.7□□□□□ -0.38
GPN1-202ENST00000407583 EVA1CP58658 441 aa12.69□□□□□ -0.38
GPN1-202ENST00000407583 NUP155O75694 1391 aa12.69□□□□□ -0.38
GPN1-202ENST00000407583 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
GPN1-202ENST00000407583 TOPAZ1Q8N9V7 1692 aa12.68□□□□□ -0.38
GPN1-202ENST00000407583 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
GPN1-202ENST00000407583 TOMM70O94826 608 aa12.68□□□□□ -0.38
GPN1-202ENST00000407583 POLD1P28340 1107 aa12.68□□□□□ -0.38
GPN1-202ENST00000407583 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
GPN1-202ENST00000407583 HSPA1AP0DMV8 641 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms