RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 AAMPQ13685 434 aa21.7■■□□□ 1.06
NUP50-203ENST00000407019 DDRGK1Q96HY6 314 aa21.7■■□□□ 1.06
NUP50-203ENST00000407019 PNPLA6Q8IY17 1366 aa21.69■■□□□ 1.06
NUP50-203ENST00000407019 TMPOP42166 694 aaKnown RBP21.69■■□□□ 1.06
NUP50-203ENST00000407019 NBR1Q14596 966 aa21.69■■□□□ 1.06
NUP50-203ENST00000407019 C8orf34Q49A92 452 aa21.69■■□□□ 1.06
NUP50-203ENST00000407019 WAPLQ7Z5K2 1190 aa21.69■■□□□ 1.06
NUP50-203ENST00000407019 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
NUP50-203ENST00000407019 CT47B1P0C2W7 299 aaPredicted RBP21.68■■□□□ 1.06
NUP50-203ENST00000407019 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
NUP50-203ENST00000407019 NRXN3Q9Y4C0 1643 aa21.67■■□□□ 1.06
NUP50-203ENST00000407019 BCL2L13Q9BXK5 485 aa21.67■■□□□ 1.06
NUP50-203ENST00000407019 PNNQ9H307 717 aaKnown RBP21.66■■□□□ 1.06
NUP50-203ENST00000407019 CDC42BPGQ6DT37 1551 aa21.65■■□□□ 1.06
NUP50-203ENST00000407019 ESF1Q9H501 851 aaKnown RBP21.65■■□□□ 1.06
NUP50-203ENST00000407019 TRIM35Q9UPQ4 493 aa21.65■■□□□ 1.06
NUP50-203ENST00000407019 RLBP1P12271 317 aa21.64■■□□□ 1.05
NUP50-203ENST00000407019 IL16Q14005 1332 aa21.64■■□□□ 1.05
NUP50-203ENST00000407019 PMFBP1Q8TBY8 1022 aa21.64■■□□□ 1.05
NUP50-203ENST00000407019 ZMYM3Q14202 1370 aa21.63■■□□□ 1.05
NUP50-203ENST00000407019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.63■■□□□ 1.05
NUP50-203ENST00000407019 TSR2Q969E8 191 aaKnown RBP21.63■■□□□ 1.05
NUP50-203ENST00000407019 TNNQ9UQP3 1299 aa21.63■■□□□ 1.05
NUP50-203ENST00000407019 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
NUP50-203ENST00000407019 METP08581 1390 aa21.62■■□□□ 1.05
NUP50-203ENST00000407019 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
NUP50-203ENST00000407019 WASLO00401 505 aaPredicted RBP21.6■■□□□ 1.05
NUP50-203ENST00000407019 ZKSCAN2Q63HK3 967 aa21.6■■□□□ 1.05
NUP50-203ENST00000407019 EDC4Q6P2E9 1401 aaKnown RBP21.6■■□□□ 1.05
NUP50-203ENST00000407019 PPIP5K1Q6PFW1 1433 aa21.6■■□□□ 1.05
NUP50-203ENST00000407019 RIPK4P57078 832 aa21.6■■□□□ 1.05
NUP50-203ENST00000407019 EXOSC9Q06265 439 aaKnown RBP21.6■■□□□ 1.05
NUP50-203ENST00000407019 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
NUP50-203ENST00000407019 CPSF1Q10570 1443 aaKnown RBP21.6■■□□□ 1.05
NUP50-203ENST00000407019 FCHSD2O94868 740 aa21.59■■□□□ 1.05
NUP50-203ENST00000407019 HDGFP51858 240 aaKnown RBP21.59■■□□□ 1.05
NUP50-203ENST00000407019 POLKQ9UBT6 870 aa21.59■■□□□ 1.05
NUP50-203ENST00000407019 FAM135BQ49AJ0 1406 aa21.58■■□□□ 1.05
NUP50-203ENST00000407019 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
NUP50-203ENST00000407019 RTL5Q5HYW3 569 aaPredicted RBP21.58■■□□□ 1.05
NUP50-203ENST00000407019 SMC4Q9NTJ3 1288 aa21.57■■□□□ 1.04
NUP50-203ENST00000407019 PCDHB15Q9Y5E8 787 aa21.57■■□□□ 1.04
NUP50-203ENST00000407019 TECPR2O15040 1411 aa21.57■■□□□ 1.04
NUP50-203ENST00000407019 TNRQ92752 1358 aa21.57■■□□□ 1.04
NUP50-203ENST00000407019 DZIP1LQ8IYY4 767 aaKnown RBP21.57■■□□□ 1.04
NUP50-203ENST00000407019 SIRT1Q96EB6 747 aa21.57■■□□□ 1.04
NUP50-203ENST00000407019 TXNDC2Q86VQ3 553 aa21.56■■□□□ 1.04
NUP50-203ENST00000407019 FTSJ3Q8IY81 847 aaKnown RBP21.56■■□□□ 1.04
NUP50-203ENST00000407019 CPS1P31327 1500 aa21.56■■□□□ 1.04
NUP50-203ENST00000407019 VIRMAQ69YN4 1812 aaKnown RBP21.56■■□□□ 1.04
NUP50-203ENST00000407019 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
NUP50-203ENST00000407019 RSPH6AQ9H0K4 717 aa21.56■■□□□ 1.04
NUP50-203ENST00000407019 NEFMP07197 916 aa21.54■■□□□ 1.04
NUP50-203ENST00000407019 PRKAR2BP31323 418 aa21.54■■□□□ 1.04
NUP50-203ENST00000407019 RWDD1Q9H446 243 aaPredicted RBP21.54■■□□□ 1.04
NUP50-203ENST00000407019 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
NUP50-203ENST00000407019 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
NUP50-203ENST00000407019 FBLN1P23142 703 aa21.52■■□□□ 1.04
NUP50-203ENST00000407019 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
NUP50-203ENST00000407019 CDK12Q9NYV4 1490 aaPredicted RBP21.52■■□□□ 1.04
NUP50-203ENST00000407019 DEKP35659 375 aaKnown RBP21.52■■□□□ 1.04
NUP50-203ENST00000407019 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.04
NUP50-203ENST00000407019 NME9Q86XW9 330 aa21.52■■□□□ 1.04
NUP50-203ENST00000407019 MAP2P11137 1827 aaKnown RBP21.52■■□□□ 1.03
NUP50-203ENST00000407019 AATKQ6ZMQ8 1374 aa21.51■■□□□ 1.03
NUP50-203ENST00000407019 TMEM2Q9UHN6 1383 aa21.51■■□□□ 1.03
NUP50-203ENST00000407019 UBR1Q8IWV7 1749 aa21.51■■□□□ 1.03
NUP50-203ENST00000407019 CCDC61Q9Y6R9 512 aa21.51■■□□□ 1.03
NUP50-203ENST00000407019 TRIM27P14373 513 aa21.5■■□□□ 1.03
NUP50-203ENST00000407019 DAXXQ9UER7 740 aaPredicted RBP21.5■■□□□ 1.03
NUP50-203ENST00000407019 ATF7IPQ6VMQ6 1270 aa21.49■■□□□ 1.03
NUP50-203ENST00000407019 EMILIN1Q9Y6C2 1016 aa21.49■■□□□ 1.03
NUP50-203ENST00000407019 PDZRN3Q9UPQ7 1066 aa21.49■■□□□ 1.03
NUP50-203ENST00000407019 NFE2L2Q16236 605 aa21.48■■□□□ 1.03
NUP50-203ENST00000407019 COG3Q96JB2 828 aa21.48■■□□□ 1.03
NUP50-203ENST00000407019 KIF16BQ96L93 1317 aa21.48■■□□□ 1.03
NUP50-203ENST00000407019 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
NUP50-203ENST00000407019 IL13P35225 146 aa21.48■■□□□ 1.03
NUP50-203ENST00000407019 DDX19BQ9UMR2 479 aa21.48■■□□□ 1.03
NUP50-203ENST00000407019 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
NUP50-203ENST00000407019 ZRANB1Q9UGI0 708 aa21.47■■□□□ 1.03
NUP50-203ENST00000407019 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
NUP50-203ENST00000407019 C3P01024 1663 aa21.46■■□□□ 1.03
NUP50-203ENST00000407019 HMOX1P09601 288 aa21.46■■□□□ 1.03
NUP50-203ENST00000407019 ALDH1L2Q3SY69 923 aa21.46■■□□□ 1.03
NUP50-203ENST00000407019 NCKAP5LQ9HCH0 1330 aa21.46■■□□□ 1.03
NUP50-203ENST00000407019 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
NUP50-203ENST00000407019 ADAMTS13Q76LX8 1427 aa21.45■■□□□ 1.02
NUP50-203ENST00000407019 CALD1Q05682 793 aaKnown RBP21.45■■□□□ 1.02
NUP50-203ENST00000407019 ITPRIPQ8IWB1 547 aa21.45■■□□□ 1.02
NUP50-203ENST00000407019 ROBO2Q9HCK4 1378 aa21.45■■□□□ 1.02
NUP50-203ENST00000407019 IPO8O15397 1037 aaKnown RBP21.44■■□□□ 1.02
NUP50-203ENST00000407019 PHACTR3Q96KR7 559 aa21.44■■□□□ 1.02
NUP50-203ENST00000407019 ZNF692Q9BU19 519 aaPredicted RBP21.44■■□□□ 1.02
NUP50-203ENST00000407019 PRR36Q9H6K5 1346 aa21.44■■□□□ 1.02
NUP50-203ENST00000407019 ZNF428Q96B54 188 aa21.44■■□□□ 1.02
NUP50-203ENST00000407019 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
NUP50-203ENST00000407019 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
NUP50-203ENST00000407019 USP19O94966 1318 aa21.42■■□□□ 1.02
NUP50-203ENST00000407019 HDAC1Q13547 482 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms