RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.8
TOM1-203ENST00000404284 ZMYM3Q14202 1370 aa20.08■□□□□ 0.8
TOM1-203ENST00000404284 FYB1O15117 783 aa20.07■□□□□ 0.8
TOM1-203ENST00000404284 SEC24BO95487 1268 aa20.07■□□□□ 0.8
TOM1-203ENST00000404284 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
TOM1-203ENST00000404284 TSR2Q969E8 191 aaKnown RBP20.06■□□□□ 0.8
TOM1-203ENST00000404284 ALKQ9UM73 1620 aa20.06■□□□□ 0.8
TOM1-203ENST00000404284 TMPOP42166 694 aaKnown RBP20.06■□□□□ 0.8
TOM1-203ENST00000404284 MVPQ14764 893 aaKnown RBP20.06■□□□□ 0.8
TOM1-203ENST00000404284 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
TOM1-203ENST00000404284 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
TOM1-203ENST00000404284 TERF2IPQ9NYB0 399 aa20.06■□□□□ 0.8
TOM1-203ENST00000404284 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
TOM1-203ENST00000404284 ZKSCAN2Q63HK3 967 aa20.04■□□□□ 0.8
TOM1-203ENST00000404284 PDZRN3Q9UPQ7 1066 aa20.04■□□□□ 0.8
TOM1-203ENST00000404284 KIF20BQ96Q89 1820 aa20.04■□□□□ 0.8
TOM1-203ENST00000404284 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
TOM1-203ENST00000404284 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
TOM1-203ENST00000404284 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
TOM1-203ENST00000404284 POGKQ9P215 609 aa20.03■□□□□ 0.8
TOM1-203ENST00000404284 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
TOM1-203ENST00000404284 RWDD1Q9H446 243 aaPredicted RBP20.02■□□□□ 0.79
TOM1-203ENST00000404284 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
TOM1-203ENST00000404284 IL16Q14005 1332 aa20■□□□□ 0.79
TOM1-203ENST00000404284 SMC4Q9NTJ3 1288 aa20■□□□□ 0.79
TOM1-203ENST00000404284 GSE1Q14687 1217 aa20■□□□□ 0.79
TOM1-203ENST00000404284 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
TOM1-203ENST00000404284 TRIM27P14373 513 aa19.99■□□□□ 0.79
TOM1-203ENST00000404284 RSPH6AQ9H0K4 717 aa19.99■□□□□ 0.79
TOM1-203ENST00000404284 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
TOM1-203ENST00000404284 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
TOM1-203ENST00000404284 HDGFL2Q7Z4V5 671 aaPredicted RBP19.98■□□□□ 0.79
TOM1-203ENST00000404284 DIAPH1O60610 1272 aaKnown RBP19.98■□□□□ 0.79
TOM1-203ENST00000404284 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
TOM1-203ENST00000404284 SETD1AO15047 1707 aaKnown RBP19.97■□□□□ 0.79
TOM1-203ENST00000404284 CABP1Q9NZU7 370 aa19.97■□□□□ 0.79
TOM1-203ENST00000404284 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
TOM1-203ENST00000404284 RIPK4P57078 832 aa19.96■□□□□ 0.79
TOM1-203ENST00000404284 FRAT2O75474 233 aaPredicted RBP19.95■□□□□ 0.78
TOM1-203ENST00000404284 ATF7IPQ6VMQ6 1270 aa19.95■□□□□ 0.78
TOM1-203ENST00000404284 TBC1D32Q96NH3 1257 aa19.94■□□□□ 0.78
TOM1-203ENST00000404284 ATP7BP35670 1465 aa19.94■□□□□ 0.78
TOM1-203ENST00000404284 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
TOM1-203ENST00000404284 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
TOM1-203ENST00000404284 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
TOM1-203ENST00000404284 REREQ9P2R6 1566 aa19.94■□□□□ 0.78
TOM1-203ENST00000404284 A2ML1A8K2U0 1454 aa19.93■□□□□ 0.78
TOM1-203ENST00000404284 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
TOM1-203ENST00000404284 HDAC1Q13547 482 aaPredicted RBP19.93■□□□□ 0.78
TOM1-203ENST00000404284 DDX19BQ9UMR2 479 aa19.93■□□□□ 0.78
TOM1-203ENST00000404284 NOB1Q9ULX3 412 aaKnown RBP19.92■□□□□ 0.78
TOM1-203ENST00000404284 AGLP35573 1532 aa19.92■□□□□ 0.78
TOM1-203ENST00000404284 SPATA31D1Q6ZQQ2 1576 aa19.92■□□□□ 0.78
TOM1-203ENST00000404284 BECN1Q14457 450 aa19.91■□□□□ 0.78
TOM1-203ENST00000404284 ITPRIPQ8IWB1 547 aa19.91■□□□□ 0.78
TOM1-203ENST00000404284 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
TOM1-203ENST00000404284 FCHSD2O94868 740 aa19.91■□□□□ 0.78
TOM1-203ENST00000404284 STAG3Q9UJ98 1225 aa19.91■□□□□ 0.78
TOM1-203ENST00000404284 UPF2Q9HAU5 1272 aaKnown RBP19.9■□□□□ 0.78
TOM1-203ENST00000404284 TMEM57Q8N5G2 664 aa19.89■□□□□ 0.78
TOM1-203ENST00000404284 POLKQ9UBT6 870 aa19.89■□□□□ 0.78
TOM1-203ENST00000404284 KIF16BQ96L93 1317 aa19.89■□□□□ 0.77
TOM1-203ENST00000404284 WAPLQ7Z5K2 1190 aa19.89■□□□□ 0.77
TOM1-203ENST00000404284 DIP2BQ9P265 1576 aa19.89■□□□□ 0.77
TOM1-203ENST00000404284 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.77
TOM1-203ENST00000404284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
TOM1-203ENST00000404284 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
TOM1-203ENST00000404284 FBLN1P23142 703 aa19.88■□□□□ 0.77
TOM1-203ENST00000404284 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
TOM1-203ENST00000404284 ZMYND15Q9H091 742 aa19.88■□□□□ 0.77
TOM1-203ENST00000404284 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
TOM1-203ENST00000404284 PPIP5K1Q6PFW1 1433 aa19.87■□□□□ 0.77
TOM1-203ENST00000404284 ALDH1L2Q3SY69 923 aa19.87■□□□□ 0.77
TOM1-203ENST00000404284 GLIPR1L2Q4G1C9 344 aa19.87■□□□□ 0.77
TOM1-203ENST00000404284 SMC5Q8IY18 1101 aa19.87■□□□□ 0.77
TOM1-203ENST00000404284 VSIG10Q8N0Z9 540 aa19.87■□□□□ 0.77
TOM1-203ENST00000404284 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
TOM1-203ENST00000404284 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
TOM1-203ENST00000404284 CPSF1Q10570 1443 aaKnown RBP19.86■□□□□ 0.77
TOM1-203ENST00000404284 ANTXR1Q9H6X2 564 aa19.86■□□□□ 0.77
TOM1-203ENST00000404284 TBC1D2Q9BYX2 928 aa19.85■□□□□ 0.77
TOM1-203ENST00000404284 IPO8O15397 1037 aaKnown RBP19.84■□□□□ 0.77
TOM1-203ENST00000404284 EDC4Q6P2E9 1401 aaKnown RBP19.84■□□□□ 0.77
TOM1-203ENST00000404284 TSPOAP1O95153 1857 aa19.84■□□□□ 0.77
TOM1-203ENST00000404284 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
TOM1-203ENST00000404284 SLKQ9H2G2 1235 aaPredicted RBP19.84■□□□□ 0.77
TOM1-203ENST00000404284 BRPF1P55201 1214 aaPredicted RBP19.83■□□□□ 0.77
TOM1-203ENST00000404284 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
TOM1-203ENST00000404284 FAM43AQ8N2R8 423 aa19.83■□□□□ 0.76
TOM1-203ENST00000404284 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.76
TOM1-203ENST00000404284 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.76
TOM1-203ENST00000404284 NFE2L2Q16236 605 aa19.82■□□□□ 0.76
TOM1-203ENST00000404284 ZNF428Q96B54 188 aa19.81■□□□□ 0.76
TOM1-203ENST00000404284 EMILIN1Q9Y6C2 1016 aa19.81■□□□□ 0.76
TOM1-203ENST00000404284 HMOX1P09601 288 aa19.81■□□□□ 0.76
TOM1-203ENST00000404284 MON2Q7Z3U7 1717 aa19.8■□□□□ 0.76
TOM1-203ENST00000404284 WASLO00401 505 aaPredicted RBP19.79■□□□□ 0.76
TOM1-203ENST00000404284 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
TOM1-203ENST00000404284 IL13P35225 146 aa19.79■□□□□ 0.76
TOM1-203ENST00000404284 THUMPD2Q9BTF0 503 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms