RNA–Protein interactions for RNA: ENST00000403810.5

TSC1-202, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene TSC1, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-202ENST00000403810 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
TSC1-202ENST00000403810 ITSN1Q15811 1721 aa20.63■□□□□ 0.89
TSC1-202ENST00000403810 COL16A1Q07092 1604 aaPredicted RBP20.63■□□□□ 0.89
TSC1-202ENST00000403810 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
TSC1-202ENST00000403810 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
TSC1-202ENST00000403810 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
TSC1-202ENST00000403810 FOXO3O43524 673 aa20.62■□□□□ 0.89
TSC1-202ENST00000403810 XPCQ01831 940 aaPredicted RBP20.61■□□□□ 0.89
TSC1-202ENST00000403810 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
TSC1-202ENST00000403810 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
TSC1-202ENST00000403810 CCDC61Q9Y6R9 512 aa20.6■□□□□ 0.89
TSC1-202ENST00000403810 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
TSC1-202ENST00000403810 PXDNQ92626 1479 aa20.6■□□□□ 0.89
TSC1-202ENST00000403810 PDE3BQ13370 1112 aa20.59■□□□□ 0.89
TSC1-202ENST00000403810 NPHP3Q7Z494 1330 aa20.59■□□□□ 0.89
TSC1-202ENST00000403810 SOS2Q07890 1332 aaPredicted RBP20.56■□□□□ 0.88
TSC1-202ENST00000403810 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
TSC1-202ENST00000403810 POLR3AO14802 1390 aaPredicted RBP20.55■□□□□ 0.88
TSC1-202ENST00000403810 NINLQ9Y2I6 1382 aa20.55■□□□□ 0.88
TSC1-202ENST00000403810 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
TSC1-202ENST00000403810 ACEP12821 1306 aa20.55■□□□□ 0.88
TSC1-202ENST00000403810 PLEKHG3A1L390 1219 aa20.54■□□□□ 0.88
TSC1-202ENST00000403810 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
TSC1-202ENST00000403810 KRT28Q7Z3Y7 464 aa20.52■□□□□ 0.87
TSC1-202ENST00000403810 RNF123Q5XPI4 1314 aa20.52■□□□□ 0.87
TSC1-202ENST00000403810 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
TSC1-202ENST00000403810 TRPM3Q9HCF6 1732 aaPredicted RBP20.5■□□□□ 0.87
TSC1-202ENST00000403810 PSME1Q06323 249 aa20.5■□□□□ 0.87
TSC1-202ENST00000403810 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
TSC1-202ENST00000403810 TNS3Q68CZ2 1445 aa20.5■□□□□ 0.87
TSC1-202ENST00000403810 SLC12A5Q9H2X9 1139 aa20.49■□□□□ 0.87
TSC1-202ENST00000403810 JCADQ9P266 1359 aa20.49■□□□□ 0.87
TSC1-202ENST00000403810 NSD3Q9BZ95 1437 aa20.49■□□□□ 0.87
TSC1-202ENST00000403810 PNPLA6Q8IY17 1366 aa20.48■□□□□ 0.87
TSC1-202ENST00000403810 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
TSC1-202ENST00000403810 USP6P35125 1406 aa20.48■□□□□ 0.87
TSC1-202ENST00000403810 LRRC59Q96AG4 307 aaKnown RBP20.48■□□□□ 0.87
TSC1-202ENST00000403810 NSD2O96028 1365 aa20.47■□□□□ 0.87
TSC1-202ENST00000403810 CPSF1Q10570 1443 aaKnown RBP20.47■□□□□ 0.87
TSC1-202ENST00000403810 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
TSC1-202ENST00000403810 SBNO1A3KN83 1393 aa20.47■□□□□ 0.87
TSC1-202ENST00000403810 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
TSC1-202ENST00000403810 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
TSC1-202ENST00000403810 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
TSC1-202ENST00000403810 AKAP12Q02952 1782 aa20.46■□□□□ 0.87
TSC1-202ENST00000403810 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
TSC1-202ENST00000403810 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
TSC1-202ENST00000403810 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
TSC1-202ENST00000403810 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
TSC1-202ENST00000403810 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
TSC1-202ENST00000403810 MON2Q7Z3U7 1717 aa20.44■□□□□ 0.86
TSC1-202ENST00000403810 SSH2Q76I76 1423 aa20.43■□□□□ 0.86
TSC1-202ENST00000403810 LMOD2Q6P5Q4 547 aa20.43■□□□□ 0.86
TSC1-202ENST00000403810 NGEFQ8N5V2 710 aa20.43■□□□□ 0.86
TSC1-202ENST00000403810 LRP6O75581 1613 aa20.41■□□□□ 0.86
TSC1-202ENST00000403810 COL22A1Q8NFW1 1626 aaPredicted RBP20.41■□□□□ 0.86
TSC1-202ENST00000403810 HDGFL2Q7Z4V5 671 aaPredicted RBP20.41■□□□□ 0.86
TSC1-202ENST00000403810 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
TSC1-202ENST00000403810 ARHGEF10O15013 1369 aa20.4■□□□□ 0.86
TSC1-202ENST00000403810 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
TSC1-202ENST00000403810 IRX6P78412 446 aaPredicted RBP20.4■□□□□ 0.86
TSC1-202ENST00000403810 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
TSC1-202ENST00000403810 EDC4Q6P2E9 1401 aaKnown RBP20.38■□□□□ 0.85
TSC1-202ENST00000403810 PIK3C2AO00443 1686 aa20.38■□□□□ 0.85
TSC1-202ENST00000403810 NUTM2GQ5VZR2 741 aa20.38■□□□□ 0.85
TSC1-202ENST00000403810 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
TSC1-202ENST00000403810 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
TSC1-202ENST00000403810 MED1Q15648 1581 aaPredicted RBP20.37■□□□□ 0.85
TSC1-202ENST00000403810 SPATA31A6Q5VVP1 1343 aa20.37■□□□□ 0.85
TSC1-202ENST00000403810 NUTM2BA6NNL0 878 aaPredicted RBP20.37■□□□□ 0.85
TSC1-202ENST00000403810 NUTM2EB1AL46 878 aaPredicted RBP20.37■□□□□ 0.85
TSC1-202ENST00000403810 NUTM2AQ8IVF1 878 aaPredicted RBP20.37■□□□□ 0.85
TSC1-202ENST00000403810 ABCA3Q99758 1704 aa20.36■□□□□ 0.85
TSC1-202ENST00000403810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.854e-6■■□□□ 11.7
TSC1-202ENST00000403810 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
TSC1-202ENST00000403810 ABTB2Q8N961 1025 aa20.35■□□□□ 0.85
TSC1-202ENST00000403810 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
TSC1-202ENST00000403810 CRYBG1Q9Y4K1 1723 aa20.34■□□□□ 0.85
TSC1-202ENST00000403810 TTC21AQ8NDW8 1320 aa20.33■□□□□ 0.85
TSC1-202ENST00000403810 NME9Q86XW9 330 aa20.32■□□□□ 0.84
TSC1-202ENST00000403810 CFAP53Q96M91 514 aa20.32■□□□□ 0.84
TSC1-202ENST00000403810 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
TSC1-202ENST00000403810 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
TSC1-202ENST00000403810 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
TSC1-202ENST00000403810 PHRF1Q9P1Y6 1649 aaKnown RBP20.32■□□□□ 0.84
TSC1-202ENST00000403810 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
TSC1-202ENST00000403810 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
TSC1-202ENST00000403810 USP19O94966 1318 aa20.31■□□□□ 0.84
TSC1-202ENST00000403810 MARF1Q9Y4F3 1742 aaKnown RBP20.3■□□□□ 0.84
TSC1-202ENST00000403810 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
TSC1-202ENST00000403810 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
TSC1-202ENST00000403810 NLRP6P59044 892 aa20.29■□□□□ 0.84
TSC1-202ENST00000403810 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
TSC1-202ENST00000403810 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
TSC1-202ENST00000403810 OVOS2A0A0J9YW53 1432 aa20.28■□□□□ 0.84
TSC1-202ENST00000403810 OVOS2Q6IE36 1432 aa20.28■□□□□ 0.84
TSC1-202ENST00000403810 SLIT3O75094 1523 aa20.28■□□□□ 0.84
TSC1-202ENST00000403810 GOLGA2Q08379 1002 aa20.27■□□□□ 0.84
TSC1-202ENST00000403810 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.83
TSC1-202ENST00000403810 USP54Q70EL1 1684 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms