RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 MAPK8IP3Q9UPT6 1336 aa23.2■■□□□ 1.3
CHTOP-205ENST00000403433 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
CHTOP-205ENST00000403433 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
CHTOP-205ENST00000403433 CPSF1Q10570 1443 aaKnown RBP23.2■■□□□ 1.3
CHTOP-205ENST00000403433 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
CHTOP-205ENST00000403433 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
CHTOP-205ENST00000403433 MON2Q7Z3U7 1717 aa23.19■■□□□ 1.3
CHTOP-205ENST00000403433 DIAPH1O60610 1272 aaKnown RBP23.19■■□□□ 1.3
CHTOP-205ENST00000403433 PDE3AQ14432 1141 aa23.18■■□□□ 1.3
CHTOP-205ENST00000403433 PLEKHF1Q96S99 279 aa23.18■■□□□ 1.3
CHTOP-205ENST00000403433 ANP32AP39687 249 aaKnown RBP23.17■■□□□ 1.3
CHTOP-205ENST00000403433 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
CHTOP-205ENST00000403433 AKAP12Q02952 1782 aa23.16■■□□□ 1.3
CHTOP-205ENST00000403433 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
CHTOP-205ENST00000403433 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
CHTOP-205ENST00000403433 C3P01024 1663 aa23.16■■□□□ 1.3
CHTOP-205ENST00000403433 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
CHTOP-205ENST00000403433 NUDT16Q96DE0 195 aaKnown RBP23.15■■□□□ 1.3
CHTOP-205ENST00000403433 TMPOP42166 694 aaKnown RBP23.14■■□□□ 1.3
CHTOP-205ENST00000403433 RARSP54136 660 aaKnown RBP23.14■■□□□ 1.3
CHTOP-205ENST00000403433 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.29
CHTOP-205ENST00000403433 CCDC61Q9Y6R9 512 aa23.13■■□□□ 1.29
CHTOP-205ENST00000403433 PDE4AP27815 886 aa23.12■■□□□ 1.29
CHTOP-205ENST00000403433 LRRC7Q96NW7 1537 aa23.12■■□□□ 1.29
CHTOP-205ENST00000403433 ROBO2Q9HCK4 1378 aa23.12■■□□□ 1.29
CHTOP-205ENST00000403433 POLKQ9UBT6 870 aa23.11■■□□□ 1.29
CHTOP-205ENST00000403433 FRAT1Q92837 279 aaPredicted RBP23.1■■□□□ 1.29
CHTOP-205ENST00000403433 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
CHTOP-205ENST00000403433 BACH2Q9BYV9 841 aa23.1■■□□□ 1.29
CHTOP-205ENST00000403433 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
CHTOP-205ENST00000403433 CT47B1P0C2W7 299 aaPredicted RBP23.08■■□□□ 1.29
CHTOP-205ENST00000403433 CEBPAP49715 358 aaPredicted RBP23.08■■□□□ 1.29
CHTOP-205ENST00000403433 NME9Q86XW9 330 aa23.08■■□□□ 1.29
CHTOP-205ENST00000403433 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.29
CHTOP-205ENST00000403433 TRIM35Q9UPQ4 493 aa23.08■■□□□ 1.29
CHTOP-205ENST00000403433 TOPAZ1Q8N9V7 1692 aa23.08■■□□□ 1.29
CHTOP-205ENST00000403433 FCHSD2O94868 740 aa23.08■■□□□ 1.28
CHTOP-205ENST00000403433 LTKP29376 864 aa23.08■■□□□ 1.28
CHTOP-205ENST00000403433 PANK1Q8TE04 598 aa23.08■■□□□ 1.28
CHTOP-205ENST00000403433 EID1Q9Y6B2 187 aa23.08■■□□□ 1.28
CHTOP-205ENST00000403433 IL16Q14005 1332 aa23.07■■□□□ 1.28
CHTOP-205ENST00000403433 SLIT1O75093 1534 aa23.07■■□□□ 1.28
CHTOP-205ENST00000403433 SKAP1Q86WV1 359 aa23.07■■□□□ 1.28
CHTOP-205ENST00000403433 AATKQ6ZMQ8 1374 aa23.07■■□□□ 1.28
CHTOP-205ENST00000403433 NEFMP07197 916 aa23.06■■□□□ 1.28
CHTOP-205ENST00000403433 COG6Q9Y2V7 657 aa23.06■■□□□ 1.28
CHTOP-205ENST00000403433 RIPK4P57078 832 aa23.06■■□□□ 1.28
CHTOP-205ENST00000403433 COG3Q96JB2 828 aa23.06■■□□□ 1.28
CHTOP-205ENST00000403433 NCKAP5LQ9HCH0 1330 aa23.05■■□□□ 1.28
CHTOP-205ENST00000403433 CLUAP1Q96AJ1 413 aa23.05■■□□□ 1.28
CHTOP-205ENST00000403433 ZNF692Q9BU19 519 aaPredicted RBP23.05■■□□□ 1.28
CHTOP-205ENST00000403433 PRR36Q9H6K5 1346 aa23.05■■□□□ 1.28
CHTOP-205ENST00000403433 ARHGAP23Q9P227 1491 aa23.04■■□□□ 1.28
CHTOP-205ENST00000403433 IPO9Q96P70 1041 aaKnown RBP23.04■■□□□ 1.28
CHTOP-205ENST00000403433 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
CHTOP-205ENST00000403433 FBLN1P23142 703 aa23.04■■□□□ 1.28
CHTOP-205ENST00000403433 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
CHTOP-205ENST00000403433 BCL2L13Q9BXK5 485 aa23.04■■□□□ 1.28
CHTOP-205ENST00000403433 RSPH6AQ9H0K4 717 aa23.04■■□□□ 1.28
CHTOP-205ENST00000403433 NRKQ7Z2Y5 1582 aa23.03■■□□□ 1.28
CHTOP-205ENST00000403433 AAMPQ13685 434 aa23.03■■□□□ 1.28
CHTOP-205ENST00000403433 PRKAR2BP31323 418 aa23.02■■□□□ 1.28
CHTOP-205ENST00000403433 EMILIN1Q9Y6C2 1016 aa23.02■■□□□ 1.28
CHTOP-205ENST00000403433 ZRANB1Q9UGI0 708 aa23.02■■□□□ 1.28
CHTOP-205ENST00000403433 DIP2AQ14689 1571 aa23.01■■□□□ 1.27
CHTOP-205ENST00000403433 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
CHTOP-205ENST00000403433 EXOSC9Q06265 439 aaKnown RBP23■■□□□ 1.27
CHTOP-205ENST00000403433 SLC26A8Q96RN1 970 aa23■■□□□ 1.27
CHTOP-205ENST00000403433 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
CHTOP-205ENST00000403433 NPM2Q86SE8 214 aaKnown RBP22.99■■□□□ 1.27
CHTOP-205ENST00000403433 IL13P35225 146 aa22.98■■□□□ 1.27
CHTOP-205ENST00000403433 RLBP1P12271 317 aa22.97■■□□□ 1.27
CHTOP-205ENST00000403433 PTCH1Q13635 1447 aa22.97■■□□□ 1.27
CHTOP-205ENST00000403433 ZKSCAN2Q63HK3 967 aa22.97■■□□□ 1.27
CHTOP-205ENST00000403433 SMC4Q9NTJ3 1288 aa22.97■■□□□ 1.27
CHTOP-205ENST00000403433 HMOX1P09601 288 aa22.96■■□□□ 1.27
CHTOP-205ENST00000403433 IGHDP01880 384 aa22.96■■□□□ 1.27
CHTOP-205ENST00000403433 NFE2L2Q16236 605 aa22.96■■□□□ 1.27
CHTOP-205ENST00000403433 THEMISQ8N1K5 641 aaPredicted RBP22.95■■□□□ 1.26
CHTOP-205ENST00000403433 TNNQ9UQP3 1299 aa22.95■■□□□ 1.26
CHTOP-205ENST00000403433 TBX22Q9Y458 520 aa22.95■■□□□ 1.26
CHTOP-205ENST00000403433 ACEP12821 1306 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 PLEKHG3A1L390 1219 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 RRS1Q15050 365 aaKnown RBP22.94■■□□□ 1.26
CHTOP-205ENST00000403433 FTSJ3Q8IY81 847 aaKnown RBP22.94■■□□□ 1.26
CHTOP-205ENST00000403433 PMFBP1Q8TBY8 1022 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
CHTOP-205ENST00000403433 USP6P35125 1406 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 RGS3P49796 1198 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
CHTOP-205ENST00000403433 NALCNQ8IZF0 1738 aa22.93■■□□□ 1.26
CHTOP-205ENST00000403433 CALD1Q05682 793 aaKnown RBP22.93■■□□□ 1.26
CHTOP-205ENST00000403433 FAM161AQ3B820 660 aa22.93■■□□□ 1.26
CHTOP-205ENST00000403433 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
CHTOP-205ENST00000403433 DZIP1LQ8IYY4 767 aaKnown RBP22.92■■□□□ 1.26
CHTOP-205ENST00000403433 OVOS2A0A0J9YW53 1432 aa22.92■■□□□ 1.26
CHTOP-205ENST00000403433 OVOS2Q6IE36 1432 aa22.92■■□□□ 1.26
CHTOP-205ENST00000403433 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
CHTOP-205ENST00000403433 NUTM2FA1L443 756 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms