RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
LINC00243-201ENST00000399196 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
LINC00243-201ENST00000399196 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
LINC00243-201ENST00000399196 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
LINC00243-201ENST00000399196 ATP7BP35670 1465 aa12.55□□□□□ -0.4
LINC00243-201ENST00000399196 XIRP1Q702N8 1843 aaKnown RBP12.54□□□□□ -0.4
LINC00243-201ENST00000399196 POLR3AO14802 1390 aaPredicted RBP12.54□□□□□ -0.4
LINC00243-201ENST00000399196 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
LINC00243-201ENST00000399196 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
LINC00243-201ENST00000399196 GGNBP2Q9H3C7 697 aa12.53□□□□□ -0.4
LINC00243-201ENST00000399196 FYB1O15117 783 aa12.52□□□□□ -0.4
LINC00243-201ENST00000399196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.4
LINC00243-201ENST00000399196 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 ZNF521Q96K83 1311 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 MTHFSP49914 203 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.41
LINC00243-201ENST00000399196 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 LRRC7Q96NW7 1537 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 ADGRL3Q9HAR2 1447 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 PDE3BQ13370 1112 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
LINC00243-201ENST00000399196 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
LINC00243-201ENST00000399196 LTBP4Q8N2S1 1624 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
LINC00243-201ENST00000399196 APAF1O14727 1248 aa12.49□□□□□ -0.41
LINC00243-201ENST00000399196 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
LINC00243-201ENST00000399196 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
LINC00243-201ENST00000399196 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
LINC00243-201ENST00000399196 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
LINC00243-201ENST00000399196 ACEP12821 1306 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 FBLN1P23142 703 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
LINC00243-201ENST00000399196 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
LINC00243-201ENST00000399196 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 ERICH6BQ5W0A0 696 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 NGDNQ8NEJ9 315 aaKnown RBP12.46□□□□□ -0.42
LINC00243-201ENST00000399196 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 NME9Q86XW9 330 aa12.45□□□□□ -0.42
LINC00243-201ENST00000399196 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
LINC00243-201ENST00000399196 AKAP12Q02952 1782 aa12.45□□□□□ -0.42
LINC00243-201ENST00000399196 COG3Q96JB2 828 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 IQSEC2Q5JU85 1478 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 RRP1P56182 461 aaKnown RBP12.44□□□□□ -0.42
LINC00243-201ENST00000399196 B4GALNT3Q6L9W6 998 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
LINC00243-201ENST00000399196 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
LINC00243-201ENST00000399196 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
LINC00243-201ENST00000399196 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 USP6P35125 1406 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 MST1RQ04912 1400 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
LINC00243-201ENST00000399196 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
LINC00243-201ENST00000399196 MSH6P52701 1360 aa12.41□□□□□ -0.42
LINC00243-201ENST00000399196 DCCP43146 1447 aa12.41□□□□□ -0.42
LINC00243-201ENST00000399196 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 PLIN1O60240 522 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
LINC00243-201ENST00000399196 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00243-201ENST00000399196 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 RUNDC1Q96C34 613 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 U2SURPO15042 1029 aaKnown RBP12.39□□□□□ -0.43
LINC00243-201ENST00000399196 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
LINC00243-201ENST00000399196 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
LINC00243-201ENST00000399196 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
LINC00243-201ENST00000399196 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 ATF3P18847 181 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 AATKQ6ZMQ8 1374 aa12.37□□□□□ -0.43
LINC00243-201ENST00000399196 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
LINC00243-201ENST00000399196 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
LINC00243-201ENST00000399196 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
LINC00243-201ENST00000399196 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
LINC00243-201ENST00000399196 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
LINC00243-201ENST00000399196 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms