RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 NEFLP07196 543 aa20.13■□□□□ 0.81
COL25A1-201ENST00000399126 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
COL25A1-201ENST00000399126 FBLN1P23142 703 aa20.12■□□□□ 0.81
COL25A1-201ENST00000399126 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
COL25A1-201ENST00000399126 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
COL25A1-201ENST00000399126 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
COL25A1-201ENST00000399126 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
COL25A1-201ENST00000399126 ITSN1Q15811 1721 aa20.09■□□□□ 0.81
COL25A1-201ENST00000399126 MON2Q7Z3U7 1717 aa20.09■□□□□ 0.81
COL25A1-201ENST00000399126 RGPD8O14715 1765 aaPredicted RBP20.09■□□□□ 0.81
COL25A1-201ENST00000399126 AKAP12Q02952 1782 aa20.09■□□□□ 0.81
COL25A1-201ENST00000399126 NME9Q86XW9 330 aa20.09■□□□□ 0.81
COL25A1-201ENST00000399126 NKTRP30414 1462 aaKnown RBP20.09■□□□□ 0.81
COL25A1-201ENST00000399126 TOPAZ1Q8N9V7 1692 aa20.09■□□□□ 0.81
COL25A1-201ENST00000399126 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
COL25A1-201ENST00000399126 EDC4Q6P2E9 1401 aaKnown RBP20.07■□□□□ 0.8
COL25A1-201ENST00000399126 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
COL25A1-201ENST00000399126 APAF1O14727 1248 aa20.07■□□□□ 0.8
COL25A1-201ENST00000399126 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
COL25A1-201ENST00000399126 ACEP12821 1306 aa20.04■□□□□ 0.8
COL25A1-201ENST00000399126 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
COL25A1-201ENST00000399126 NPHP4O75161 1426 aaPredicted RBP20.04■□□□□ 0.8
COL25A1-201ENST00000399126 PMFBP1Q8TBY8 1022 aa20.03■□□□□ 0.8
COL25A1-201ENST00000399126 CFAP53Q96M91 514 aa20.03■□□□□ 0.8
COL25A1-201ENST00000399126 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.8
COL25A1-201ENST00000399126 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.8
COL25A1-201ENST00000399126 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
COL25A1-201ENST00000399126 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
COL25A1-201ENST00000399126 ZNF521Q96K83 1311 aa20.01■□□□□ 0.79
COL25A1-201ENST00000399126 PLEKHG3A1L390 1219 aa20■□□□□ 0.79
COL25A1-201ENST00000399126 NRKQ7Z2Y5 1582 aa20■□□□□ 0.79
COL25A1-201ENST00000399126 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
COL25A1-201ENST00000399126 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
COL25A1-201ENST00000399126 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
COL25A1-201ENST00000399126 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL25A1-201ENST00000399126 ZNF692Q9BU19 519 aaPredicted RBP19.99■□□□□ 0.79
COL25A1-201ENST00000399126 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
COL25A1-201ENST00000399126 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
COL25A1-201ENST00000399126 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
COL25A1-201ENST00000399126 USP6P35125 1406 aa19.98■□□□□ 0.79
COL25A1-201ENST00000399126 TTC21BQ7Z4L5 1316 aa19.97■□□□□ 0.79
COL25A1-201ENST00000399126 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
COL25A1-201ENST00000399126 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
COL25A1-201ENST00000399126 FMN2Q9NZ56 1722 aa19.96■□□□□ 0.79
COL25A1-201ENST00000399126 NEUROD2Q15784 382 aa19.96■□□□□ 0.79
COL25A1-201ENST00000399126 COG3Q96JB2 828 aa19.96■□□□□ 0.79
COL25A1-201ENST00000399126 RRS1Q15050 365 aaKnown RBP19.95■□□□□ 0.78
COL25A1-201ENST00000399126 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
COL25A1-201ENST00000399126 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
COL25A1-201ENST00000399126 RUNDC1Q96C34 613 aa19.94■□□□□ 0.78
COL25A1-201ENST00000399126 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
COL25A1-201ENST00000399126 IQSEC2Q5JU85 1478 aa19.94■□□□□ 0.78
COL25A1-201ENST00000399126 HSPA2P54652 639 aa19.94■□□□□ 0.78
COL25A1-201ENST00000399126 TCP11L2Q8N4U5 519 aa19.94■□□□□ 0.78
COL25A1-201ENST00000399126 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
COL25A1-201ENST00000399126 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
COL25A1-201ENST00000399126 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
COL25A1-201ENST00000399126 SSH2Q76I76 1423 aa19.92■□□□□ 0.78
COL25A1-201ENST00000399126 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
COL25A1-201ENST00000399126 DIAPH1O60610 1272 aaKnown RBP19.92■□□□□ 0.78
COL25A1-201ENST00000399126 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
COL25A1-201ENST00000399126 ANO8Q9HCE9 1232 aaPredicted RBP19.91■□□□□ 0.78
COL25A1-201ENST00000399126 SOX12O15370 315 aa19.9■□□□□ 0.78
COL25A1-201ENST00000399126 OVOS2A0A0J9YW53 1432 aa19.9■□□□□ 0.78
COL25A1-201ENST00000399126 OVOS2Q6IE36 1432 aa19.9■□□□□ 0.78
COL25A1-201ENST00000399126 ANKARQ7Z5J8 1434 aa19.9■□□□□ 0.78
COL25A1-201ENST00000399126 WWC1Q8IX03 1113 aa19.89■□□□□ 0.78
COL25A1-201ENST00000399126 SLFN5Q08AF3 891 aa19.89■□□□□ 0.77
COL25A1-201ENST00000399126 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
COL25A1-201ENST00000399126 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
COL25A1-201ENST00000399126 PLEKHF1Q96S99 279 aa19.88■□□□□ 0.77
COL25A1-201ENST00000399126 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
COL25A1-201ENST00000399126 RRP1P56182 461 aaKnown RBP19.86■□□□□ 0.77
COL25A1-201ENST00000399126 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
COL25A1-201ENST00000399126 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
COL25A1-201ENST00000399126 NUTM2GQ5VZR2 741 aa19.85■□□□□ 0.77
COL25A1-201ENST00000399126 TRMT2AQ8IZ69 625 aaKnown RBP19.85■□□□□ 0.77
COL25A1-201ENST00000399126 LRRC7Q96NW7 1537 aa19.85■□□□□ 0.77
COL25A1-201ENST00000399126 PLIN1O60240 522 aa19.84■□□□□ 0.77
COL25A1-201ENST00000399126 HMOX1P09601 288 aa19.84■□□□□ 0.77
COL25A1-201ENST00000399126 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
COL25A1-201ENST00000399126 STRCP1A6NGW2 1772 aa19.84■□□□□ 0.77
COL25A1-201ENST00000399126 IL13P35225 146 aa19.83■□□□□ 0.77
COL25A1-201ENST00000399126 PEAK1Q9H792 1746 aa19.83■□□□□ 0.77
COL25A1-201ENST00000399126 PROSER2Q86WR7 435 aaPredicted RBP19.83■□□□□ 0.76
COL25A1-201ENST00000399126 PHF8Q9UPP1 1060 aa19.83■□□□□ 0.76
COL25A1-201ENST00000399126 TTC21AQ8NDW8 1320 aa19.82■□□□□ 0.76
COL25A1-201ENST00000399126 ESCO1Q5FWF5 840 aa19.82■□□□□ 0.76
COL25A1-201ENST00000399126 PDE4CQ08493 712 aa19.81■□□□□ 0.76
COL25A1-201ENST00000399126 PKNOX2Q96KN3 472 aa19.81■□□□□ 0.76
COL25A1-201ENST00000399126 USP31Q70CQ4 1352 aa19.81■□□□□ 0.76
COL25A1-201ENST00000399126 E9PSI1 815 aa19.81■□□□□ 0.76
COL25A1-201ENST00000399126 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
COL25A1-201ENST00000399126 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
COL25A1-201ENST00000399126 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
COL25A1-201ENST00000399126 RSPH6AQ9H0K4 717 aa19.8■□□□□ 0.76
COL25A1-201ENST00000399126 MARF1Q9Y4F3 1742 aaKnown RBP19.8■□□□□ 0.76
COL25A1-201ENST00000399126 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
COL25A1-201ENST00000399126 PRKAR2BP31323 418 aa19.8■□□□□ 0.76
COL25A1-201ENST00000399126 TMPOP42166 694 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms