RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 RGS3P49796 1198 aa5.98□□□□□ -1.45
TTC3-204ENST00000399017 HMGN5P82970 282 aaKnown RBP5.98□□□□□ -1.45
TTC3-204ENST00000399017 LRRCC1Q9C099 1032 aa5.98□□□□□ -1.45
TTC3-204ENST00000399017 CNNM1Q9NRU3 951 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 MAGEC2Q9UBF1 373 aaPredicted RBP5.97□□□□□ -1.45
TTC3-204ENST00000399017 CARMIL1Q5VZK9 1371 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 PRPF31Q8WWY3 499 aaKnown RBP5.97□□□□□ -1.45
TTC3-204ENST00000399017 VTI1AQ96AJ9 217 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 SPG7Q9UQ90 795 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 DHX8Q14562 1220 aaKnown RBP5.97□□□□□ -1.45
TTC3-204ENST00000399017 AIDAQ96BJ3 306 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 PPP4R3BQ5MIZ7 849 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 OLFM4Q6UX06 510 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 CCDC117Q8IWD4 279 aaPredicted RBP5.97□□□□□ -1.45
TTC3-204ENST00000399017 OGFOD1Q8N543 542 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 SCAPERQ9BY12 1400 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 EIF4E1BA6NMX2 242 aaKnown RBP5.97□□□□□ -1.45
TTC3-204ENST00000399017 EP400NLQ6ZTU2 488 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 STRN4Q9NRL3 753 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 ZNF76P36508 570 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 CCDC158Q5M9N0 1113 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 WDR78Q5VTH9 848 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 CUL5Q93034 780 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 SMARCE1Q969G3 411 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 PLEKHO1Q53GL0 409 aaPredicted RBP5.97□□□□□ -1.45
TTC3-204ENST00000399017 SOGA3Q5TF21 947 aa5.97□□□□□ -1.45
TTC3-204ENST00000399017 BIRC2Q13490 618 aa5.96□□□□□ -1.45
TTC3-204ENST00000399017 RILPL2Q969X0 211 aa5.96□□□□□ -1.45
TTC3-204ENST00000399017 PSMA5P28066 241 aa5.96□□□□□ -1.45
TTC3-204ENST00000399017 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.45
TTC3-204ENST00000399017 JPH4Q96JJ6 628 aa5.96□□□□□ -1.46
TTC3-204ENST00000399017 RBM19Q9Y4C8 960 aaKnown RBP5.96□□□□□ -1.46
TTC3-204ENST00000399017 ESCO1Q5FWF5 840 aa5.96□□□□□ -1.46
TTC3-204ENST00000399017 RPGRQ92834 1020 aaKnown RBP5.96□□□□□ -1.46
TTC3-204ENST00000399017 C11orf95C9JLR9 678 aaPredicted RBP5.96□□□□□ -1.46
TTC3-204ENST00000399017 NLRP13Q86W25 1043 aa5.96□□□□□ -1.46
TTC3-204ENST00000399017 BIN2Q9UBW5 565 aaPredicted RBP5.96□□□□□ -1.46
TTC3-204ENST00000399017 LPXNO60711 386 aa5.96□□□□□ -1.46
TTC3-204ENST00000399017 BRDTQ58F21 947 aaPredicted RBP5.96□□□□□ -1.46
TTC3-204ENST00000399017 STK24Q9Y6E0 443 aa5.96□□□□□ -1.46
TTC3-204ENST00000399017 PDILTQ8N807 584 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 NAP1L5Q96NT1 182 aaPredicted RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 FYB1O15117 783 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 UTP14AQ9BVJ6 771 aaKnown RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 RABEP1Q15276 862 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 FILIP1LQ4L180 1135 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 TNPO1Q92973 898 aaKnown RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 NOL8Q76FK4 1167 aaKnown RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 APBB1IPQ7Z5R6 666 aaPredicted RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 RAB34Q9BZG1 259 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 CCDC57Q2TAC2 916 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 SPATA32Q96LK8 384 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 STK25O00506 426 aa5.95□□□□□ -1.46
TTC3-204ENST00000399017 EIF2S2P20042 333 aaKnown RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 MRPS9P82933 396 aaKnown RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 DZIP1LQ8IYY4 767 aaKnown RBP5.95□□□□□ -1.46
TTC3-204ENST00000399017 TEX35Q5T0J7 233 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 KAT6AQ92794 2004 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 CAVIN4Q5BKX8 364 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 ERCC4Q92889 916 aaPredicted RBP5.94□□□□□ -1.46
TTC3-204ENST00000399017 EPB41L2O43491 1005 aaKnown RBP5.94□□□□□ -1.46
TTC3-204ENST00000399017 RRBP1Q9P2E9 1410 aaKnown RBP5.94□□□□□ -1.46
TTC3-204ENST00000399017 IGHMBP2P38935 993 aaKnown RBP5.94□□□□□ -1.46
TTC3-204ENST00000399017 CABP4P57796 275 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 GAS2L2Q8NHY3 880 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 COMMD10Q9Y6G5 202 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 TTC21AQ8NDW8 1320 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 MYH10P35580 1976 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 GOLGA6L7A0A1B0GV03 622 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 ST5P78524 1137 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 PRDM11Q9NQV5 511 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 SEC63Q9UGP8 760 aaKnown RBP5.94□□□□□ -1.46
TTC3-204ENST00000399017 KIF7Q2M1P5 1343 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 PLIN1O60240 522 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 JMYQ8N9B5 988 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 CABP2Q9NPB3 220 aa5.94□□□□□ -1.46
TTC3-204ENST00000399017 CRACR2BQ8N4Y2 399 aaPredicted RBP5.94□□□□□ -1.46
TTC3-204ENST00000399017 CCDC91Q7Z6B0 441 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 GOLGA6L10A6NI86 522 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 TAF12Q16514 161 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 CCDC181Q5TID7 509 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 ANKIB1Q9P2G1 1089 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 MAP7D2Q96T17 732 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 DDX23Q9BUQ8 820 aaKnown RBP5.93□□□□□ -1.46
TTC3-204ENST00000399017 CCDC14Q49A88 953 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 KMT5BQ4FZB7 885 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 PNISRQ8TF01 805 aaKnown RBP5.93□□□□□ -1.46
TTC3-204ENST00000399017 RBM42Q9BTD8 480 aaKnown RBP5.93□□□□□ -1.46
TTC3-204ENST00000399017 ZNF692Q9BU19 519 aaPredicted RBP5.93□□□□□ -1.46
TTC3-204ENST00000399017 TRIM5Q9C035 493 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 PDIA4P13667 645 aaKnown RBP5.93□□□□□ -1.46
TTC3-204ENST00000399017 NEUROD6Q96NK8 337 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 BCL2L13Q9BXK5 485 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 ANKRD18BA2A2Z9 1011 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 PTPRGP23470 1445 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 ANKRD62A6NC57 917 aa5.93□□□□□ -1.46
TTC3-204ENST00000399017 CCAR2Q8N163 923 aaKnown RBP5.93□□□□□ -1.46
TTC3-204ENST00000399017 CETN1Q12798 172 aa5.92□□□□□ -1.46
TTC3-204ENST00000399017 HSP90B2PQ58FF3 399 aa5.92□□□□□ -1.46
TTC3-204ENST00000399017 PDCP20941 246 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms