RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CHD4Q14839 1912 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 RAPGEF4Q8WZA2 1011 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 DDX12PQ92771 950 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 ARHGEF5Q12774 1597 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 KDM5DQ9BY66 1539 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 RBM26Q5T8P6 1007 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 ZNF692Q9BU19 519 aaPredicted RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 RRP7BPQ9NSQ0 103 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 MSH6P52701 1360 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 ABCC2Q92887 1545 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 ERC1Q8IUD2 1116 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 UNC13BO14795 1591 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 RAD54L2Q9Y4B4 1467 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 SYNMO15061 1565 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 APBB1IPQ7Z5R6 666 aaPredicted RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 NLRP13Q86W25 1043 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 KDM6BO15054 1643 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 EPS15P42566 896 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 TPD52L1Q16890 204 aaPredicted RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 JMYQ8N9B5 988 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 LRRC45Q96CN5 670 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 RUSC2Q8N2Y8 1516 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 GIGYF2Q6Y7W6 1299 aaKnown RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 C9orf78Q9NZ63 289 aaPredicted RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 HOOK2Q96ED9 719 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 TBC1D2BQ9UPU7 963 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 CHMP3Q9Y3E7 222 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 RTEL1-TNFRSF6BF6WH68 1400 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 ANKRD50Q9ULJ7 1429 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 DENND4BO75064 1496 aaPredicted RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 CCER2I3L3R5 266 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 CDKL5O76039 1030 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 CT47A1Q5JQC4 288 aaPredicted RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 ABCC1P33527 1531 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 ABCC10Q5T3U5 1492 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 TNIP1Q15025 636 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 SYCP1Q15431 976 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 ZBTB22O15209 634 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 CNGA1P29973 690 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 ZSCAN25Q6NSZ9 544 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 CCDC150Q8NCX0 1101 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 FMNL3Q8IVF7 1028 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 DNAJC2Q99543 621 aaKnown RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 DDX19BQ9UMR2 479 aa3.28□□□□□ -1.88
CHD9-202ENST00000398510 LAS1LQ9Y4W2 734 aaKnown RBP3.28□□□□□ -1.88
CHD9-202ENST00000398510 MYH6P13533 1939 aa3.28□□□□□ -1.89
CHD9-202ENST00000398510 HOXA7P31268 230 aaPredicted RBP3.28□□□□□ -1.89
CHD9-202ENST00000398510 AKAP12Q02952 1782 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 KIF20AO95235 890 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 PPIP5K1Q6PFW1 1433 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 MAGI2Q86UL8 1455 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 UGGT2Q9NYU1 1516 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 YEATS2Q9ULM3 1422 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 MYBBP1AQ9BQG0 1328 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 LETM1O95202 739 aaPredicted RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 RABEP1Q15276 862 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 USP37Q86T82 979 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 DIAPH3Q9NSV4 1193 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 TMOD2Q9NZR1 351 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 NOC2LQ9Y3T9 749 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 ATP7AQ04656 1500 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 EZRP15311 586 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 CAVIN1Q6NZI2 390 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 NACAP1Q9BZK3 213 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 SPG7Q9UQ90 795 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 ZCCHC11Q5TAX3 1644 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 MAPKBP1O60336 1514 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 USP47Q96K76 1375 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 H3BQV1 296 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 IFFO2Q5TF58 517 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 TTC37Q6PGP7 1564 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 POTEJP0CG39 1038 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 GGT6Q6P531 493 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 GTPBP4Q9BZE4 634 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 NEO1Q92859 1461 aa3.27□□□□□ -1.89
CHD9-202ENST00000398510 TTC12Q9H892 705 aaPredicted RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 RNF17Q9BXT8 1623 aaKnown RBP3.27□□□□□ -1.89
CHD9-202ENST00000398510 KCNH5Q8NCM2 988 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 GOLGA6L7A0A1B0GV03 622 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 GOLGA6L19H0YKK7 550 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 ATF7IPQ6VMQ6 1270 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 CCDC88AQ3V6T2 1871 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 URB2Q14146 1524 aaKnown RBP3.26□□□□□ -1.89
CHD9-202ENST00000398510 LOXHD1Q8IVV2 1947 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 CALRP27797 417 aaKnown RBP3.26□□□□□ -1.89
CHD9-202ENST00000398510 STIM1Q13586 685 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 ANKLE2Q86XL3 938 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 ZFYVE16Q7Z3T8 1539 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 CPLX1O14810 134 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 MCM2P49736 904 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.26□□□□□ -1.895e-7■■■■■ 99.2
CHD9-202ENST00000398510 ARAP3Q8WWN8 1544 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 IQGAP1P46940 1657 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 CASTP20810 708 aaKnown RBP3.26□□□□□ -1.89
CHD9-202ENST00000398510 ANKRD1Q15327 319 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 GAS2L2Q8NHY3 880 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 DRC1Q96MC2 740 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 MYO1BO43795 1136 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 RGL3Q3MIN7 710 aa3.26□□□□□ -1.89
CHD9-202ENST00000398510 RALYLQ86SE5 291 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms