RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 CD109Q6YHK3 1445 aa29.53■■■□□ 2.32
KHSRP-201ENST00000398148 GBP4Q96PP9 640 aa29.53■■■□□ 2.32
KHSRP-201ENST00000398148 TBC1D9Q6ZT07 1266 aa29.52■■■□□ 2.32
KHSRP-201ENST00000398148 DDX49Q9Y6V7 483 aaKnown RBP29.52■■■□□ 2.32
KHSRP-201ENST00000398148 SHPRHQ149N8 1683 aa29.52■■■□□ 2.32
KHSRP-201ENST00000398148 SLC24A1O60721 1099 aa29.52■■■□□ 2.32
KHSRP-201ENST00000398148 TPRNQ4KMQ1 711 aa29.52■■■□□ 2.32
KHSRP-201ENST00000398148 KIF2CQ99661 725 aa29.52■■■□□ 2.32
KHSRP-201ENST00000398148 PLEKHF1Q96S99 279 aa29.51■■■□□ 2.31
KHSRP-201ENST00000398148 C14orf93Q9H972 538 aaKnown RBP29.51■■■□□ 2.31
KHSRP-201ENST00000398148 EVC2Q86UK5 1308 aa29.49■■■□□ 2.31
KHSRP-201ENST00000398148 C16orf71Q8IYS4 520 aaPredicted RBP29.49■■■□□ 2.31
KHSRP-201ENST00000398148 PKP1Q13835 747 aa29.48■■■□□ 2.31
KHSRP-201ENST00000398148 MCTP1Q6DN14 999 aa29.48■■■□□ 2.31
KHSRP-201ENST00000398148 ZMYND15Q9H091 742 aa29.48■■■□□ 2.31
KHSRP-201ENST00000398148 ABCC1P33527 1531 aa29.48■■■□□ 2.31
KHSRP-201ENST00000398148 RBM10P98175 930 aaKnown RBP29.48■■■□□ 2.31
KHSRP-201ENST00000398148 PRKAR2BP31323 418 aa29.47■■■□□ 2.31
KHSRP-201ENST00000398148 IPO8O15397 1037 aaKnown RBP29.46■■■□□ 2.31
KHSRP-201ENST00000398148 RBM25P49756 843 aaKnown RBP29.46■■■□□ 2.31
KHSRP-201ENST00000398148 RAB3GAP1Q15042 981 aa29.46■■■□□ 2.31
KHSRP-201ENST00000398148 PHACTR3Q96KR7 559 aa29.45■■■□□ 2.3
KHSRP-201ENST00000398148 MAP3K4Q9Y6R4 1608 aa29.45■■■□□ 2.3
KHSRP-201ENST00000398148 K7ELQ4 463 aaPredicted RBP29.44■■■□□ 2.3
KHSRP-201ENST00000398148 DIAPH1O60610 1272 aaKnown RBP29.44■■■□□ 2.3
KHSRP-201ENST00000398148 DDIT3P35638 169 aa29.44■■■□□ 2.3
KHSRP-201ENST00000398148 NASPP49321 788 aaPredicted RBP29.44■■■□□ 2.3
KHSRP-201ENST00000398148 CAVIN1Q6NZI2 390 aaKnown RBP29.44■■■□□ 2.3
KHSRP-201ENST00000398148 FYB1O15117 783 aa29.43■■■□□ 2.3
KHSRP-201ENST00000398148 GLIPR1L2Q4G1C9 344 aa29.43■■■□□ 2.3
KHSRP-201ENST00000398148 PKNOX2Q96KN3 472 aa29.43■■■□□ 2.3
KHSRP-201ENST00000398148 FOXD4L6Q3SYB3 417 aaPredicted RBP29.42■■■□□ 2.3
KHSRP-201ENST00000398148 FOXD4L3Q6VB84 417 aaPredicted RBP29.42■■■□□ 2.3
KHSRP-201ENST00000398148 DCTN1Q14203 1278 aa29.42■■■□□ 2.3
KHSRP-201ENST00000398148 SIRT2Q8IXJ6 389 aa29.42■■■□□ 2.3
KHSRP-201ENST00000398148 AK9Q5TCS8 1911 aa29.41■■■□□ 2.3
KHSRP-201ENST00000398148 OTUD7AQ8TE49 926 aaPredicted RBP29.4■■■□□ 2.3
KHSRP-201ENST00000398148 A0A1W2PP64 1363 aa29.4■■■□□ 2.3
KHSRP-201ENST00000398148 ZFYVE16Q7Z3T8 1539 aa29.4■■■□□ 2.3
KHSRP-201ENST00000398148 KIAA1211Q6ZU35 1233 aa29.4■■■□□ 2.3
KHSRP-201ENST00000398148 RBM27Q9P2N5 1060 aaKnown RBP29.4■■■□□ 2.3
KHSRP-201ENST00000398148 MPNDQ8N594 471 aa29.39■■■□□ 2.3
KHSRP-201ENST00000398148 KIF16BQ96L93 1317 aa29.38■■■□□ 2.29
KHSRP-201ENST00000398148 FAM83GA6ND36 823 aa29.38■■■□□ 2.29
KHSRP-201ENST00000398148 ZBTB7BO15156 539 aaPredicted RBP29.38■■■□□ 2.29
KHSRP-201ENST00000398148 SNX21Q969T3 373 aa29.38■■■□□ 2.29
KHSRP-201ENST00000398148 NOL8Q76FK4 1167 aaKnown RBP29.38■■■□□ 2.29
KHSRP-201ENST00000398148 SMARCA5O60264 1052 aaPredicted RBP29.37■■■□□ 2.29
KHSRP-201ENST00000398148 BMP2KLQ5H9B9 411 aa29.37■■■□□ 2.29
KHSRP-201ENST00000398148 BAG4O95429 457 aaKnown RBP29.37■■■□□ 2.29
KHSRP-201ENST00000398148 FANCAO15360 1455 aa29.36■■■□□ 2.29
KHSRP-201ENST00000398148 PPIP5K1Q6PFW1 1433 aa29.36■■■□□ 2.29
KHSRP-201ENST00000398148 PRAM1Q96QH2 718 aa29.35■■■□□ 2.29
KHSRP-201ENST00000398148 CABP1Q9NZU7 370 aa29.35■■■□□ 2.29
KHSRP-201ENST00000398148 GOLGA6L22H0YM25 854 aa29.34■■■□□ 2.29
KHSRP-201ENST00000398148 GSPT1P15170 499 aaKnown RBP29.34■■■□□ 2.29
KHSRP-201ENST00000398148 ZGPATQ8N5A5 531 aaKnown RBP29.34■■■□□ 2.29
KHSRP-201ENST00000398148 ANP32BQ92688 251 aaKnown RBP29.34■■■□□ 2.29
KHSRP-201ENST00000398148 ANKRD36BQ8N2N9 1353 aa29.33■■■□□ 2.29
KHSRP-201ENST00000398148 KRT24Q2M2I5 525 aa29.33■■■□□ 2.29
KHSRP-201ENST00000398148 MROH2AA6NES4 1674 aa29.33■■■□□ 2.29
KHSRP-201ENST00000398148 CHD1O14646 1710 aa29.33■■■□□ 2.29
KHSRP-201ENST00000398148 PRPF40AO75400 957 aaKnown RBP29.32■■■□□ 2.28
KHSRP-201ENST00000398148 ATP7AQ04656 1500 aa29.31■■■□□ 2.28
KHSRP-201ENST00000398148 ZRANB1Q9UGI0 708 aa29.31■■■□□ 2.28
KHSRP-201ENST00000398148 ADGRL1O94910 1474 aa29.3■■■□□ 2.28
KHSRP-201ENST00000398148 TET3O43151 1660 aa29.3■■■□□ 2.28
KHSRP-201ENST00000398148 CT47B1P0C2W7 299 aaPredicted RBP29.3■■■□□ 2.28
KHSRP-201ENST00000398148 RNF214Q8ND24 703 aa29.3■■■□□ 2.28
KHSRP-201ENST00000398148 R3HCC1Q9Y3T6 440 aaKnown RBP29.3■■■□□ 2.28
KHSRP-201ENST00000398148 VAMP4O75379 141 aa29.3■■■□□ 2.28
KHSRP-201ENST00000398148 MSNP26038 577 aaKnown RBP29.3■■■□□ 2.28
KHSRP-201ENST00000398148 C8orf58Q8NAV2 365 aa29.3■■■□□ 2.28
KHSRP-201ENST00000398148 ZMYM3Q14202 1370 aa29.3■■■□□ 2.28
KHSRP-201ENST00000398148 ZCCHC11Q5TAX3 1644 aaKnown RBP29.3■■■□□ 2.28
KHSRP-201ENST00000398148 RRP9O43818 475 aaKnown RBP29.29■■■□□ 2.28
KHSRP-201ENST00000398148 XPCQ01831 940 aaPredicted RBP29.29■■■□□ 2.28
KHSRP-201ENST00000398148 MYOM2P54296 1465 aa29.29■■■□□ 2.28
KHSRP-201ENST00000398148 SBNO2Q9Y2G9 1366 aa29.29■■■□□ 2.28
KHSRP-201ENST00000398148 EMILIN1Q9Y6C2 1016 aa29.29■■■□□ 2.28
KHSRP-201ENST00000398148 SKOR2Q2VWA4 1001 aaPredicted RBP29.28■■■□□ 2.28
KHSRP-201ENST00000398148 FAM13BQ9NYF5 915 aa29.28■■■□□ 2.28
KHSRP-201ENST00000398148 CALD1Q05682 793 aaKnown RBP29.28■■■□□ 2.28
KHSRP-201ENST00000398148 NCOA3Q9Y6Q9 1424 aa29.27■■■□□ 2.28
KHSRP-201ENST00000398148 MRPL50Q8N5N7 158 aaKnown RBP29.27■■■□□ 2.28
KHSRP-201ENST00000398148 CIZ1Q9ULV3 898 aaPredicted RBP29.27■■■□□ 2.28
KHSRP-201ENST00000398148 TSHZ3Q63HK5 1081 aa29.26■■■□□ 2.28
KHSRP-201ENST00000398148 MBIPQ9NS73 344 aa29.26■■■□□ 2.28
KHSRP-201ENST00000398148 CDC45O75419 566 aa29.26■■■□□ 2.27
KHSRP-201ENST00000398148 QRICH2Q9H0J4 1663 aa29.25■■■□□ 2.27
KHSRP-201ENST00000398148 RBSNQ9H1K0 784 aa29.25■■■□□ 2.27
KHSRP-201ENST00000398148 TWISTNBQ3B726 338 aaPredicted RBP29.25■■■□□ 2.27
KHSRP-201ENST00000398148 KIF1BO60333 1816 aa29.24■■■□□ 2.27
KHSRP-201ENST00000398148 PRIM1P49642 420 aaKnown RBP29.24■■■□□ 2.27
KHSRP-201ENST00000398148 TERF2IPQ9NYB0 399 aa29.24■■■□□ 2.27
KHSRP-201ENST00000398148 ABCC11Q96J66 1382 aa29.24■■■□□ 2.27
KHSRP-201ENST00000398148 GCC1Q96CN9 775 aa29.23■■■□□ 2.27
KHSRP-201ENST00000398148 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
KHSRP-201ENST00000398148 IDI1Q13907 227 aa29.23■■■□□ 2.27
KHSRP-201ENST00000398148 SOX12O15370 315 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms