RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
COL6A2-203ENST00000397763 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
COL6A2-203ENST00000397763 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
COL6A2-203ENST00000397763 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
COL6A2-203ENST00000397763 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
COL6A2-203ENST00000397763 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
COL6A2-203ENST00000397763 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
COL6A2-203ENST00000397763 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
COL6A2-203ENST00000397763 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
COL6A2-203ENST00000397763 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
COL6A2-203ENST00000397763 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
COL6A2-203ENST00000397763 DEPDC5O75140 1603 aa17.24■□□□□ 0.35
COL6A2-203ENST00000397763 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
COL6A2-203ENST00000397763 IDI1Q13907 227 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 ANKRD36BQ8N2N9 1353 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 AAMPQ13685 434 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
COL6A2-203ENST00000397763 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
COL6A2-203ENST00000397763 EFCAB6Q5THR3 1501 aa17.22■□□□□ 0.35
COL6A2-203ENST00000397763 KIAA1210Q9ULL0 1709 aa17.22■□□□□ 0.35
COL6A2-203ENST00000397763 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
COL6A2-203ENST00000397763 NUCB1Q02818 461 aa17.22■□□□□ 0.35
COL6A2-203ENST00000397763 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
COL6A2-203ENST00000397763 GRPEL1Q9HAV7 217 aa17.21■□□□□ 0.35
COL6A2-203ENST00000397763 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
COL6A2-203ENST00000397763 ZMYND15Q9H091 742 aa17.2■□□□□ 0.34
COL6A2-203ENST00000397763 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
COL6A2-203ENST00000397763 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
COL6A2-203ENST00000397763 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
COL6A2-203ENST00000397763 IPO8O15397 1037 aaKnown RBP17.19■□□□□ 0.34
COL6A2-203ENST00000397763 TRIM44Q96DX7 344 aaPredicted RBP17.19■□□□□ 0.34
COL6A2-203ENST00000397763 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
COL6A2-203ENST00000397763 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
COL6A2-203ENST00000397763 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
COL6A2-203ENST00000397763 SSFA2P28290 1259 aa17.19■□□□□ 0.34
COL6A2-203ENST00000397763 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
COL6A2-203ENST00000397763 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
COL6A2-203ENST00000397763 CLCN1P35523 988 aa17.17■□□□□ 0.34
COL6A2-203ENST00000397763 WAPLQ7Z5K2 1190 aa17.17■□□□□ 0.34
COL6A2-203ENST00000397763 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-203ENST00000397763 KIF2CQ99661 725 aa17.17■□□□□ 0.34
COL6A2-203ENST00000397763 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
COL6A2-203ENST00000397763 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
COL6A2-203ENST00000397763 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 KIF16BQ96L93 1317 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 CDK19Q9BWU1 502 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 ADGRB3O60242 1522 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
COL6A2-203ENST00000397763 MRE11P49959 708 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
COL6A2-203ENST00000397763 CHAMP1Q96JM3 812 aa17.16■□□□□ 0.34
COL6A2-203ENST00000397763 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
COL6A2-203ENST00000397763 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
COL6A2-203ENST00000397763 UHRF1BP1LA0JNW5 1464 aa17.15■□□□□ 0.34
COL6A2-203ENST00000397763 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.34
COL6A2-203ENST00000397763 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
COL6A2-203ENST00000397763 ESPNB1AK53 854 aa17.14■□□□□ 0.33
COL6A2-203ENST00000397763 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
COL6A2-203ENST00000397763 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-203ENST00000397763 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
COL6A2-203ENST00000397763 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
COL6A2-203ENST00000397763 KIDINS220Q9ULH0 1771 aa17.13■□□□□ 0.33
COL6A2-203ENST00000397763 VAMP4O75379 141 aa17.13■□□□□ 0.33
COL6A2-203ENST00000397763 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL6A2-203ENST00000397763 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-203ENST00000397763 FOXD4L5Q5VV16 416 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-203ENST00000397763 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
COL6A2-203ENST00000397763 FOXD4L4Q8WXT5 416 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-203ENST00000397763 ABCC11Q96J66 1382 aa17.13■□□□□ 0.33
COL6A2-203ENST00000397763 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
COL6A2-203ENST00000397763 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-203ENST00000397763 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
COL6A2-203ENST00000397763 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
COL6A2-203ENST00000397763 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
COL6A2-203ENST00000397763 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
COL6A2-203ENST00000397763 GLI2P10070 1586 aa17.12■□□□□ 0.33
COL6A2-203ENST00000397763 SOX12O15370 315 aa17.11■□□□□ 0.33
COL6A2-203ENST00000397763 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-203ENST00000397763 DDIT3P35638 169 aa17.11■□□□□ 0.33
COL6A2-203ENST00000397763 PKP1Q13835 747 aa17.11■□□□□ 0.33
COL6A2-203ENST00000397763 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
COL6A2-203ENST00000397763 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
COL6A2-203ENST00000397763 NME9Q86XW9 330 aa17.1■□□□□ 0.33
COL6A2-203ENST00000397763 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
COL6A2-203ENST00000397763 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
COL6A2-203ENST00000397763 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
COL6A2-203ENST00000397763 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
COL6A2-203ENST00000397763 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-203ENST00000397763 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
COL6A2-203ENST00000397763 RAB3GAP1Q15042 981 aa17.09■□□□□ 0.33
COL6A2-203ENST00000397763 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-203ENST00000397763 ARID3AQ99856 593 aa17.09■□□□□ 0.33
COL6A2-203ENST00000397763 NSD2O96028 1365 aa17.09■□□□□ 0.33
COL6A2-203ENST00000397763 AK9Q5TCS8 1911 aa17.09■□□□□ 0.33
COL6A2-203ENST00000397763 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms