RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TTC21BQ7Z4L5 1316 aa26.75■■□□□ 1.87
MAP1LC3A-203ENST00000397709 SCAF1Q9H7N4 1312 aaKnown RBP26.75■■□□□ 1.87
MAP1LC3A-203ENST00000397709 XPCQ01831 940 aaPredicted RBP26.75■■□□□ 1.87
MAP1LC3A-203ENST00000397709 SBNO1A3KN83 1393 aa26.73■■□□□ 1.87
MAP1LC3A-203ENST00000397709 TTC21AQ8NDW8 1320 aa26.72■■□□□ 1.87
MAP1LC3A-203ENST00000397709 KNSTRNQ9Y448 316 aa26.72■■□□□ 1.87
MAP1LC3A-203ENST00000397709 PHLPP1O60346 1717 aa26.72■■□□□ 1.87
MAP1LC3A-203ENST00000397709 ALS2Q96Q42 1657 aa26.71■■□□□ 1.87
MAP1LC3A-203ENST00000397709 KIF20BQ96Q89 1820 aa26.71■■□□□ 1.87
MAP1LC3A-203ENST00000397709 PIK3C2AO00443 1686 aa26.7■■□□□ 1.87
MAP1LC3A-203ENST00000397709 COL16A1Q07092 1604 aaPredicted RBP26.7■■□□□ 1.86
MAP1LC3A-203ENST00000397709 CGNL1Q0VF96 1302 aa26.69■■□□□ 1.86
MAP1LC3A-203ENST00000397709 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
MAP1LC3A-203ENST00000397709 TNS3Q68CZ2 1445 aa26.69■■□□□ 1.86
MAP1LC3A-203ENST00000397709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.69■■□□□ 1.86
MAP1LC3A-203ENST00000397709 PAK3O75914 559 aaPredicted RBP26.67■■□□□ 1.86
MAP1LC3A-203ENST00000397709 NPC1L1Q9UHC9 1359 aa26.67■■□□□ 1.86
MAP1LC3A-203ENST00000397709 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
MAP1LC3A-203ENST00000397709 SPATA31A3Q5VYP0 1347 aa26.66■■□□□ 1.86
MAP1LC3A-203ENST00000397709 NSD2O96028 1365 aa26.66■■□□□ 1.86
MAP1LC3A-203ENST00000397709 FYB1O15117 783 aa26.65■■□□□ 1.86
MAP1LC3A-203ENST00000397709 NME9Q86XW9 330 aa26.65■■□□□ 1.86
MAP1LC3A-203ENST00000397709 ANKRD26Q9UPS8 1709 aa26.65■■□□□ 1.86
MAP1LC3A-203ENST00000397709 USP31Q70CQ4 1352 aa26.64■■□□□ 1.86
MAP1LC3A-203ENST00000397709 MARF1Q9Y4F3 1742 aaKnown RBP26.63■■□□□ 1.85
MAP1LC3A-203ENST00000397709 ABTB2Q8N961 1025 aa26.62■■□□□ 1.85
MAP1LC3A-203ENST00000397709 OVOS2A0A0J9YW53 1432 aa26.62■■□□□ 1.85
MAP1LC3A-203ENST00000397709 OVOS2Q6IE36 1432 aa26.62■■□□□ 1.85
MAP1LC3A-203ENST00000397709 ARHGEF10O15013 1369 aa26.61■■□□□ 1.85
MAP1LC3A-203ENST00000397709 LRRC59Q96AG4 307 aaKnown RBP26.61■■□□□ 1.85
MAP1LC3A-203ENST00000397709 GGNBP2Q9H3C7 697 aa26.6■■□□□ 1.85
MAP1LC3A-203ENST00000397709 ZRANB1Q9UGI0 708 aa26.6■■□□□ 1.85
MAP1LC3A-203ENST00000397709 MED1Q15648 1581 aaPredicted RBP26.59■■□□□ 1.85
MAP1LC3A-203ENST00000397709 FBXO41Q8TF61 875 aa26.58■■□□□ 1.85
MAP1LC3A-203ENST00000397709 CC2D1BQ5T0F9 858 aaKnown RBP26.57■■□□□ 1.84
MAP1LC3A-203ENST00000397709 LMOD2Q6P5Q4 547 aa26.57■■□□□ 1.84
MAP1LC3A-203ENST00000397709 COL22A1Q8NFW1 1626 aaPredicted RBP26.57■■□□□ 1.84
MAP1LC3A-203ENST00000397709 CRYBG1Q9Y4K1 1723 aa26.56■■□□□ 1.84
MAP1LC3A-203ENST00000397709 HSPA1LP34931 641 aa26.56■■□□□ 1.84
MAP1LC3A-203ENST00000397709 NLRP6P59044 892 aa26.56■■□□□ 1.84
MAP1LC3A-203ENST00000397709 NUTM2GQ5VZR2 741 aa26.56■■□□□ 1.84
MAP1LC3A-203ENST00000397709 COG3Q96JB2 828 aa26.56■■□□□ 1.84
MAP1LC3A-203ENST00000397709 DIEXFQ68CQ4 756 aaKnown RBP26.55■■□□□ 1.84
MAP1LC3A-203ENST00000397709 NLRP13Q86W25 1043 aa26.55■■□□□ 1.84
MAP1LC3A-203ENST00000397709 USP19O94966 1318 aa26.55■■□□□ 1.84
MAP1LC3A-203ENST00000397709 PNPLA6Q8IY17 1366 aa26.55■■□□□ 1.84
MAP1LC3A-203ENST00000397709 SLIT3O75094 1523 aa26.55■■□□□ 1.84
MAP1LC3A-203ENST00000397709 SHPRHQ149N8 1683 aa26.54■■□□□ 1.84
MAP1LC3A-203ENST00000397709 PARD3Q8TEW0 1356 aa26.53■■□□□ 1.84
MAP1LC3A-203ENST00000397709 PHRF1Q9P1Y6 1649 aaKnown RBP26.53■■□□□ 1.84
MAP1LC3A-203ENST00000397709 ABCA3Q99758 1704 aa26.51■■□□□ 1.83
MAP1LC3A-203ENST00000397709 CNGB1Q14028 1251 aaPredicted RBP26.51■■□□□ 1.83
MAP1LC3A-203ENST00000397709 MORC1Q86VD1 984 aa26.51■■□□□ 1.83
MAP1LC3A-203ENST00000397709 JCADQ9P266 1359 aa26.5■■□□□ 1.83
MAP1LC3A-203ENST00000397709 PRKRIP1Q9H875 184 aaPredicted RBP26.48■■□□□ 1.83
MAP1LC3A-203ENST00000397709 NFAT5O94916 1531 aa26.48■■□□□ 1.83
MAP1LC3A-203ENST00000397709 RALBP1Q15311 655 aa26.47■■□□□ 1.83
MAP1LC3A-203ENST00000397709 ANP32CO43423 234 aa26.45■■□□□ 1.82
MAP1LC3A-203ENST00000397709 CABLES1Q8TDN4 633 aa26.45■■□□□ 1.82
MAP1LC3A-203ENST00000397709 AATKQ6ZMQ8 1374 aa26.45■■□□□ 1.82
MAP1LC3A-203ENST00000397709 GCP02774 474 aa26.44■■□□□ 1.82
MAP1LC3A-203ENST00000397709 KCNH5Q8NCM2 988 aa26.44■■□□□ 1.82
MAP1LC3A-203ENST00000397709 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
MAP1LC3A-203ENST00000397709 TNNT2P45379 298 aaPredicted RBP26.41■■□□□ 1.82
MAP1LC3A-203ENST00000397709 SOX12O15370 315 aa26.4■■□□□ 1.82
MAP1LC3A-203ENST00000397709 FBLN1P23142 703 aa26.4■■□□□ 1.82
MAP1LC3A-203ENST00000397709 MAP2P11137 1827 aaKnown RBP26.39■■□□□ 1.82
MAP1LC3A-203ENST00000397709 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.81
MAP1LC3A-203ENST00000397709 PPP2R1AP30153 589 aa26.38■■□□□ 1.81
MAP1LC3A-203ENST00000397709 LTN1O94822 1766 aa26.38■■□□□ 1.81
MAP1LC3A-203ENST00000397709 SPATA31A6Q5VVP1 1343 aa26.38■■□□□ 1.81
MAP1LC3A-203ENST00000397709 MYBBP1AQ9BQG0 1328 aaKnown RBP26.38■■□□□ 1.81
MAP1LC3A-203ENST00000397709 CPDO75976 1380 aa26.37■■□□□ 1.81
MAP1LC3A-203ENST00000397709 HAP1P54257 671 aaPredicted RBP26.36■■□□□ 1.81
MAP1LC3A-203ENST00000397709 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
MAP1LC3A-203ENST00000397709 ARHGEF25Q86VW2 580 aa26.35■■□□□ 1.81
MAP1LC3A-203ENST00000397709 POLKQ9UBT6 870 aa26.35■■□□□ 1.81
MAP1LC3A-203ENST00000397709 MAP3K19Q56UN5 1328 aa26.35■■□□□ 1.81
MAP1LC3A-203ENST00000397709 PEAK1Q9H792 1746 aa26.34■■□□□ 1.81
MAP1LC3A-203ENST00000397709 KIAA0232Q92628 1395 aa26.33■■□□□ 1.81
MAP1LC3A-203ENST00000397709 ZC3H6P61129 1189 aaKnown RBP26.33■■□□□ 1.81
MAP1LC3A-203ENST00000397709 EMILIN1Q9Y6C2 1016 aa26.33■■□□□ 1.81
MAP1LC3A-203ENST00000397709 KIF24Q5T7B8 1368 aa26.33■■□□□ 1.8
MAP1LC3A-203ENST00000397709 ABCC6O95255 1503 aa26.32■■□□□ 1.8
MAP1LC3A-203ENST00000397709 RTL1A6NKG5 1358 aa26.32■■□□□ 1.8
MAP1LC3A-203ENST00000397709 LRP6O75581 1613 aa26.32■■□□□ 1.8
MAP1LC3A-203ENST00000397709 COL18A1P39060 1754 aa26.31■■□□□ 1.8
MAP1LC3A-203ENST00000397709 CDK12Q9NYV4 1490 aaPredicted RBP26.3■■□□□ 1.8
MAP1LC3A-203ENST00000397709 NUTM2BA6NNL0 878 aaPredicted RBP26.3■■□□□ 1.8
MAP1LC3A-203ENST00000397709 NUTM2EB1AL46 878 aaPredicted RBP26.3■■□□□ 1.8
MAP1LC3A-203ENST00000397709 MTHFSP49914 203 aa26.3■■□□□ 1.8
MAP1LC3A-203ENST00000397709 NUTM2AQ8IVF1 878 aaPredicted RBP26.3■■□□□ 1.8
MAP1LC3A-203ENST00000397709 LMO7Q8WWI1 1683 aa26.28■■□□□ 1.8
MAP1LC3A-203ENST00000397709 FLT4P35916 1363 aa26.28■■□□□ 1.8
MAP1LC3A-203ENST00000397709 COL14A1Q05707 1796 aaKnown RBP26.28■■□□□ 1.8
MAP1LC3A-203ENST00000397709 MIER1Q8N108 512 aa26.27■■□□□ 1.8
MAP1LC3A-203ENST00000397709 PRDM11Q9NQV5 511 aa26.27■■□□□ 1.8
MAP1LC3A-203ENST00000397709 INSRP06213 1382 aa26.26■■□□□ 1.79
MAP1LC3A-203ENST00000397709 ZBTB7CA1YPR0 619 aa26.26■■□□□ 1.79
MAP1LC3A-203ENST00000397709 HOXC9P31274 260 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms