RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
MCF2L-205ENST00000397017 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
MCF2L-205ENST00000397017 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
MCF2L-205ENST00000397017 GNAI1P63096 354 aa19.25■□□□□ 0.67
MCF2L-205ENST00000397017 PDE4AP27815 886 aa19.25■□□□□ 0.67
MCF2L-205ENST00000397017 FCHSD2O94868 740 aa19.24■□□□□ 0.67
MCF2L-205ENST00000397017 TNNQ9UQP3 1299 aa19.24■□□□□ 0.67
MCF2L-205ENST00000397017 ARAP3Q8WWN8 1544 aa19.24■□□□□ 0.67
MCF2L-205ENST00000397017 OS9Q13438 667 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-205ENST00000397017 PHACTR3Q96KR7 559 aa19.23■□□□□ 0.67
MCF2L-205ENST00000397017 UNC13BO14795 1591 aa19.23■□□□□ 0.67
MCF2L-205ENST00000397017 TTC21BQ7Z4L5 1316 aa19.23■□□□□ 0.67
MCF2L-205ENST00000397017 TWISTNBQ3B726 338 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-205ENST00000397017 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
MCF2L-205ENST00000397017 EFCAB6Q5THR3 1501 aa19.22■□□□□ 0.67
MCF2L-205ENST00000397017 ERVK-7P63135 1459 aa19.22■□□□□ 0.67
MCF2L-205ENST00000397017 CENPQQ7L2Z9 268 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-205ENST00000397017 E9PCH4 1651 aa19.21■□□□□ 0.67
MCF2L-205ENST00000397017 TMEM2Q9UHN6 1383 aa19.21■□□□□ 0.67
MCF2L-205ENST00000397017 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
MCF2L-205ENST00000397017 EVA1CP58658 441 aa19.2■□□□□ 0.66
MCF2L-205ENST00000397017 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
MCF2L-205ENST00000397017 ANKRD45Q5TZF3 282 aa19.2■□□□□ 0.66
MCF2L-205ENST00000397017 SSH1Q8WYL5 1049 aa19.2■□□□□ 0.66
MCF2L-205ENST00000397017 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
MCF2L-205ENST00000397017 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-205ENST00000397017 PIK3C2GO75747 1445 aa19.19■□□□□ 0.66
MCF2L-205ENST00000397017 RARSP54136 660 aaKnown RBP19.19■□□□□ 0.66
MCF2L-205ENST00000397017 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
MCF2L-205ENST00000397017 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
MCF2L-205ENST00000397017 DDX17Q92841 729 aaKnown RBP19.18■□□□□ 0.66
MCF2L-205ENST00000397017 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
MCF2L-205ENST00000397017 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
MCF2L-205ENST00000397017 ORAI2Q96SN7 254 aa19.18■□□□□ 0.66
MCF2L-205ENST00000397017 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
MCF2L-205ENST00000397017 TET3O43151 1660 aa19.18■□□□□ 0.66
MCF2L-205ENST00000397017 MFAP1P55081 439 aaKnown RBP19.18■□□□□ 0.66
MCF2L-205ENST00000397017 CABLES1Q8TDN4 633 aa19.17■□□□□ 0.66
MCF2L-205ENST00000397017 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
MCF2L-205ENST00000397017 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
MCF2L-205ENST00000397017 AIMP1Q12904 312 aaKnown RBP19.16■□□□□ 0.66
MCF2L-205ENST00000397017 CEP152O94986 1710 aa19.16■□□□□ 0.66
MCF2L-205ENST00000397017 CHRNA2Q15822 529 aa19.15■□□□□ 0.66
MCF2L-205ENST00000397017 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
MCF2L-205ENST00000397017 RNF17Q9BXT8 1623 aaKnown RBP19.15■□□□□ 0.66
MCF2L-205ENST00000397017 KRT24Q2M2I5 525 aa19.15■□□□□ 0.66
MCF2L-205ENST00000397017 SYTL4Q96C24 671 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-205ENST00000397017 DDX19BQ9UMR2 479 aa19.14■□□□□ 0.66
MCF2L-205ENST00000397017 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
MCF2L-205ENST00000397017 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.65
MCF2L-205ENST00000397017 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
MCF2L-205ENST00000397017 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
MCF2L-205ENST00000397017 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
MCF2L-205ENST00000397017 ATF7IPQ6VMQ6 1270 aa19.11■□□□□ 0.65
MCF2L-205ENST00000397017 TMEM57Q8N5G2 664 aa19.11■□□□□ 0.65
MCF2L-205ENST00000397017 KRT28Q7Z3Y7 464 aa19.11■□□□□ 0.65
MCF2L-205ENST00000397017 ANP32EQ9BTT0 268 aa19.11■□□□□ 0.65
MCF2L-205ENST00000397017 POLR3AO14802 1390 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-205ENST00000397017 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
MCF2L-205ENST00000397017 KIF16BQ96L93 1317 aa19.11■□□□□ 0.65
MCF2L-205ENST00000397017 LRRC59Q96AG4 307 aaKnown RBP19.11■□□□□ 0.65
MCF2L-205ENST00000397017 SLKQ9H2G2 1235 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-205ENST00000397017 KIF1BO60333 1816 aa19.1■□□□□ 0.65
MCF2L-205ENST00000397017 PPRC1Q5VV67 1664 aaKnown RBP19.1■□□□□ 0.65
MCF2L-205ENST00000397017 GAS2L2Q8NHY3 880 aa19.1■□□□□ 0.65
MCF2L-205ENST00000397017 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
MCF2L-205ENST00000397017 ABCA6Q8N139 1617 aa19.1■□□□□ 0.65
MCF2L-205ENST00000397017 SPHKAPQ2M3C7 1700 aa19.1■□□□□ 0.65
MCF2L-205ENST00000397017 CHMP3Q9Y3E7 222 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 PRR36Q9H6K5 1346 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 MAP3K19Q56UN5 1328 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 MYOM2P54296 1465 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 ABCC11Q96J66 1382 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 PDE3AQ14432 1141 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 TPRNQ4KMQ1 711 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 NSD2O96028 1365 aa19.09■□□□□ 0.65
MCF2L-205ENST00000397017 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.65
MCF2L-205ENST00000397017 TSPYL6Q8N831 410 aa19.08■□□□□ 0.65
MCF2L-205ENST00000397017 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.65
MCF2L-205ENST00000397017 DDRGK1Q96HY6 314 aa19.07■□□□□ 0.64
MCF2L-205ENST00000397017 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
MCF2L-205ENST00000397017 MBIPQ9NS73 344 aa19.07■□□□□ 0.64
MCF2L-205ENST00000397017 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
MCF2L-205ENST00000397017 API5Q9BZZ5 524 aaKnown RBP19.07■□□□□ 0.64
MCF2L-205ENST00000397017 NINLQ9Y2I6 1382 aa19.07■□□□□ 0.64
MCF2L-205ENST00000397017 RLBP1P12271 317 aa19.06■□□□□ 0.64
MCF2L-205ENST00000397017 F6X3S4 739 aa19.06■□□□□ 0.64
MCF2L-205ENST00000397017 TRIM27P14373 513 aa19.06■□□□□ 0.64
MCF2L-205ENST00000397017 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
MCF2L-205ENST00000397017 PUS7Q96PZ0 661 aaKnown RBP19.06■□□□□ 0.64
MCF2L-205ENST00000397017 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-205ENST00000397017 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-205ENST00000397017 TOM1L2Q6ZVM7 507 aa19.05■□□□□ 0.64
MCF2L-205ENST00000397017 NUTM2AQ8IVF1 878 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-205ENST00000397017 BECN1Q14457 450 aa19.05■□□□□ 0.64
MCF2L-205ENST00000397017 MVPQ14764 893 aaKnown RBP19.05■□□□□ 0.64
MCF2L-205ENST00000397017 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
MCF2L-205ENST00000397017 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms