RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MCM4P33991 863 aa17.7■□□□□ 0.42
NUP98-204ENST00000397004 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
NUP98-204ENST00000397004 GGT6Q6P531 493 aa17.7■□□□□ 0.42
NUP98-204ENST00000397004 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
NUP98-204ENST00000397004 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
NUP98-204ENST00000397004 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
NUP98-204ENST00000397004 NOB1Q9ULX3 412 aaKnown RBP17.7■□□□□ 0.42
NUP98-204ENST00000397004 TMEM57Q8N5G2 664 aa17.7■□□□□ 0.42
NUP98-204ENST00000397004 TSPOAP1O95153 1857 aa17.7■□□□□ 0.42
NUP98-204ENST00000397004 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
NUP98-204ENST00000397004 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
NUP98-204ENST00000397004 DDIT3P35638 169 aa17.68■□□□□ 0.42
NUP98-204ENST00000397004 FBLN1P23142 703 aa17.68■□□□□ 0.42
NUP98-204ENST00000397004 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
NUP98-204ENST00000397004 CD163L1Q9NR16 1453 aa17.68■□□□□ 0.42
NUP98-204ENST00000397004 ZBTB40Q9NUA8 1239 aa17.68■□□□□ 0.42
NUP98-204ENST00000397004 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
NUP98-204ENST00000397004 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
NUP98-204ENST00000397004 ITPRIPQ8IWB1 547 aa17.67■□□□□ 0.42
NUP98-204ENST00000397004 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
NUP98-204ENST00000397004 CFAP53Q96M91 514 aa17.66■□□□□ 0.42
NUP98-204ENST00000397004 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
NUP98-204ENST00000397004 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
NUP98-204ENST00000397004 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
NUP98-204ENST00000397004 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
NUP98-204ENST00000397004 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
NUP98-204ENST00000397004 FYB1O15117 783 aa17.65■□□□□ 0.42
NUP98-204ENST00000397004 KIF2CQ99661 725 aa17.65■□□□□ 0.42
NUP98-204ENST00000397004 ABCC3O15438 1527 aa17.65■□□□□ 0.42
NUP98-204ENST00000397004 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
NUP98-204ENST00000397004 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
NUP98-204ENST00000397004 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
NUP98-204ENST00000397004 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
NUP98-204ENST00000397004 YEATS2Q9ULM3 1422 aa17.63■□□□□ 0.41
NUP98-204ENST00000397004 PIK3C2BO00750 1634 aa17.63■□□□□ 0.41
NUP98-204ENST00000397004 REREQ9P2R6 1566 aa17.62■□□□□ 0.41
NUP98-204ENST00000397004 STK26Q9P289 416 aa17.62■□□□□ 0.41
NUP98-204ENST00000397004 NSD2O96028 1365 aa17.62■□□□□ 0.41
NUP98-204ENST00000397004 TRAK2O60296 914 aa17.62■□□□□ 0.41
NUP98-204ENST00000397004 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
NUP98-204ENST00000397004 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
NUP98-204ENST00000397004 RIPK4P57078 832 aa17.61■□□□□ 0.41
NUP98-204ENST00000397004 NUCB1Q02818 461 aa17.61■□□□□ 0.41
NUP98-204ENST00000397004 DDX19BQ9UMR2 479 aa17.61■□□□□ 0.41
NUP98-204ENST00000397004 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
NUP98-204ENST00000397004 CHMP5Q9NZZ3 219 aa17.6■□□□□ 0.41
NUP98-204ENST00000397004 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
NUP98-204ENST00000397004 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
NUP98-204ENST00000397004 IDI1Q13907 227 aa17.59■□□□□ 0.41
NUP98-204ENST00000397004 RBM25P49756 843 aaKnown RBP17.59■□□□□ 0.41
NUP98-204ENST00000397004 PTPRMP28827 1452 aa17.59■□□□□ 0.41
NUP98-204ENST00000397004 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.41
NUP98-204ENST00000397004 THUMPD2Q9BTF0 503 aaKnown RBP17.58■□□□□ 0.41
NUP98-204ENST00000397004 GAS2L3Q86XJ1 694 aa17.58■□□□□ 0.4
NUP98-204ENST00000397004 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
NUP98-204ENST00000397004 C1orf115Q9H7X2 142 aa17.58■□□□□ 0.4
NUP98-204ENST00000397004 PPIP5K1Q6PFW1 1433 aa17.58■□□□□ 0.4
NUP98-204ENST00000397004 GOLGA6L3A6NEY3 463 aa17.57■□□□□ 0.4
NUP98-204ENST00000397004 MYO5BQ9ULV0 1848 aa17.57■□□□□ 0.4
NUP98-204ENST00000397004 TSPYL6Q8N831 410 aa17.57■□□□□ 0.4
NUP98-204ENST00000397004 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
NUP98-204ENST00000397004 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
NUP98-204ENST00000397004 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
NUP98-204ENST00000397004 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
NUP98-204ENST00000397004 MINK1Q8N4C8 1332 aaPredicted RBP17.56■□□□□ 0.4
NUP98-204ENST00000397004 SRPK2P78362 688 aaKnown RBP17.56■□□□□ 0.4
NUP98-204ENST00000397004 LRRC7Q96NW7 1537 aa17.56■□□□□ 0.4
NUP98-204ENST00000397004 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
NUP98-204ENST00000397004 ZBTB7BO15156 539 aaPredicted RBP17.55■□□□□ 0.4
NUP98-204ENST00000397004 IL16Q14005 1332 aa17.55■□□□□ 0.4
NUP98-204ENST00000397004 CHD1LQ86WJ1 897 aa17.55■□□□□ 0.4
NUP98-204ENST00000397004 TNPO1Q92973 898 aaKnown RBP17.55■□□□□ 0.4
NUP98-204ENST00000397004 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
NUP98-204ENST00000397004 MED14O60244 1454 aa17.54■□□□□ 0.4
NUP98-204ENST00000397004 VGFO15240 615 aaPredicted RBP17.53■□□□□ 0.4
NUP98-204ENST00000397004 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
NUP98-204ENST00000397004 PRAM1Q96QH2 718 aa17.53■□□□□ 0.4
NUP98-204ENST00000397004 AGLP35573 1532 aa17.53■□□□□ 0.4
NUP98-204ENST00000397004 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
NUP98-204ENST00000397004 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
NUP98-204ENST00000397004 SNX21Q969T3 373 aa17.52■□□□□ 0.39
NUP98-204ENST00000397004 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
NUP98-204ENST00000397004 VAMP4O75379 141 aa17.51■□□□□ 0.39
NUP98-204ENST00000397004 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 FAM135BQ49AJ0 1406 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 UBE2Q2Q8WVN8 375 aa17.5■□□□□ 0.39
NUP98-204ENST00000397004 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
NUP98-204ENST00000397004 TBC1D9Q6ZT07 1266 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
NUP98-204ENST00000397004 KNDC1Q76NI1 1749 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 BMP2KLQ5H9B9 411 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 GRPEL1Q9HAV7 217 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 HMOX1P09601 288 aa17.49■□□□□ 0.39
NUP98-204ENST00000397004 ANKRD45Q5TZF3 282 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms